RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 STAM2O75886 525 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 ASGR2P07307 311 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 ZNF24P17028 368 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 CAPN3P20807 821 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 RPS6KB1P23443 525 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 GALNSP34059 522 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 GNL1P36915 607 aaPredicted RBP5.99□□□□□ -1.45
VPS41-209ENST00000457055 MATR3P43243 847 aaKnown RBP eCLIP5.99□□□□□ -1.45
VPS41-209ENST00000457055 MRE11P49959 708 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 GTF2A2P52657 109 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 EVCP57679 992 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 HTRA3P83110 453 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 ADCY2Q08462 1091 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 EFEMP1Q12805 493 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 SQSTM1Q13501 440 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 BECN1Q14457 450 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 RABEP1Q15276 862 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 SPATS1Q496A3 300 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 NT5DC1Q5TFE4 455 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 NUGGCQ68CJ6 796 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 C4orf50Q6ZRC1 276 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 SEPT14Q6ZU15 432 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 RAPH1Q70E73 1250 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 DEFB132Q7Z7B7 95 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 SAPCD2Q86UD0 394 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 CABP7Q86V35 215 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 IQCA1Q86XH1 822 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 PASD1Q8IV76 773 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 EFCAB13Q8IY85 973 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 RTKN2Q8IZC4 609 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 LRRC43Q8N309 656 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 CARNMT1Q8N4J0 409 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 ADCY4Q8NFM4 1077 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 NLGN2Q8NFZ4 835 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 TEKT4Q8WW24 435 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 CTNNBL1Q8WYA6 563 aaPredicted RBP5.99□□□□□ -1.45
VPS41-209ENST00000457055 TIFAQ96CG3 184 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 RBM18Q96H35 190 aaKnown RBP5.99□□□□□ -1.45
VPS41-209ENST00000457055 CNDP2Q96KP4 475 aaKnown RBP5.99□□□□□ -1.45
VPS41-209ENST00000457055 C1orf74Q96LT6 269 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 NAP1L3Q99457 506 aaPredicted RBP5.99□□□□□ -1.45
VPS41-209ENST00000457055 HAUS7Q99871 368 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 CAPS2Q9BXY5 557 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 ASPSCR1Q9BZE9 553 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 CCDC68Q9H2F9 335 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 RXFP1Q9HBX9 757 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 NCOA5Q9HCD5 579 aaKnown RBP5.99□□□□□ -1.45
VPS41-209ENST00000457055 PRDM11Q9NQV5 511 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 ANKEF1Q9NU02 776 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 TCP11L1Q9NUJ3 509 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 SPATA7Q9P0W8 599 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 POGKQ9P215 609 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 CFDP1Q9UEE9 299 aaPredicted RBP5.99□□□□□ -1.45
VPS41-209ENST00000457055 ZNF180Q9UJW8 692 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 PLAAQ9Y263 795 aa5.99□□□□□ -1.45
VPS41-209ENST00000457055 V9GYY5 206 aaPredicted RBP5.99□□□□□ -1.45
VPS41-209ENST00000457055 ERLIN1O75477 346 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 BAG4O95429 457 aaKnown RBP5.98□□□□□ -1.45
VPS41-209ENST00000457055 CYP17A1P05093 508 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 GLI4P10075 376 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 STMN1P16949 149 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 TRIM21P19474 475 aaKnown RBP5.98□□□□□ -1.45
VPS41-209ENST00000457055 SOX5P35711 763 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 UBXN11Q5T124 520 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 HECTD3Q5T447 861 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 INTS11Q5TA45 600 aaKnown RBP5.98□□□□□ -1.45
VPS41-209ENST00000457055 VPS53Q5VIR6 699 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 SPATA1Q5VX52 437 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 EEF1DP3Q658K8 133 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 RCSD1Q6JBY9 416 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 OLFML1Q6UWY5 402 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 GBP6Q6ZN66 633 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 ARHGEF18Q6ZSZ5 1173 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 ARMC9Q7Z3E5 817 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 GGNQ86UU5 652 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 NKAPQ8N5F7 415 aaKnown RBP5.98□□□□□ -1.45
VPS41-209ENST00000457055 TNIP2Q8NFZ5 429 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 GJA10Q969M2 543 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 TRIM63Q969Q1 353 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 ZBTB9Q96C00 473 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 HOOK2Q96ED9 719 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 CCDC114Q96M63 670 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 TSGA13Q96PP4 275 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 ALG1Q9BT22 464 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 KATNAL1Q9BW62 490 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 RTFDC1Q9BY42 306 aaPredicted RBP5.98□□□□□ -1.45
VPS41-209ENST00000457055 SLC13A1Q9BZW2 595 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 CAAP1Q9H8G2 361 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 ALG13Q9NP73 1137 aaKnown RBP5.98□□□□□ -1.45
VPS41-209ENST00000457055 STARD7Q9NQZ5 370 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 UBAP1Q9NZ09 502 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 TBC1D7Q9P0N9 293 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 CALCOCO1Q9P1Z2 691 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 WHRNQ9P202 907 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 PPARGC1AQ9UBK2 798 aaKnown RBP5.98□□□□□ -1.45
VPS41-209ENST00000457055 MTUS1Q9ULD2 1270 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 DUSP12Q9UNI6 340 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 SLC4A7Q9Y6M7 1214 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 EP400Q96L91 3159 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 LTBP3Q9NS15 1303 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms