RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 TBC1D13Q9NVG8 400 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 KLK14Q9P0G3 267 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 KANSL3Q9P2N6 904 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 EXOC7Q9UPT5 735 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 GDAQ9Y2T3 454 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 PCDHA5Q9Y5H7 936 aa10.99□□□□□ -0.65
ATG4A-206ENST00000457035 PLXNA4Q9HCM2 1894 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 C5orf67F2Z3F1 127 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 RFXAPO00287 272 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 TGFB1I1O43294 461 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 B4GALT3O60512 393 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 LPXNO60711 386 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 KINO60870 393 aaKnown RBP10.98□□□□□ -0.65
ATG4A-206ENST00000457035 RECQL4O94761 1208 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 DDHD2O94830 711 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 RB1P06400 928 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 IGFBP4P22692 258 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 MLH1P40692 756 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 OSTNP61366 133 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 CCDC85BQ15834 202 aaPredicted RBP10.98□□□□□ -0.65
ATG4A-206ENST00000457035 BMT2Q1RMZ1 405 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 SLC10A6Q3KNW5 377 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 SEZ6Q53EL9 994 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 STXBP4Q6ZWJ1 553 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 LRRC43Q8N309 656 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 ARNTL2Q8WYA1 636 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 SAMD11Q96NU1 681 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 ACAP3Q96P50 834 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 GSDMAQ96QA5 445 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 MRPL9Q9BYD2 267 aaKnown RBP10.98□□□□□ -0.65
ATG4A-206ENST00000457035 NRDE2Q9H7Z3 1164 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 ANKFY1Q9P2R3 1169 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 PLAGL2Q9UPG8 496 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 INPP5FQ9Y2H2 1132 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 RWDD3Q9Y3V2 267 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 ZMYM2Q9UBW7 1377 aa10.98□□□□□ -0.65
ATG4A-206ENST00000457035 SPTBN5Q9NRC6 3674 aaKnown RBP10.97□□□□□ -0.65
ATG4A-206ENST00000457035 PTGESO14684 152 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 OGTO15294 1046 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 POMCP01189 267 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 ADRB2P07550 413 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 CLTAP09496 248 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 HARSP12081 509 aaKnown RBP10.97□□□□□ -0.65
ATG4A-206ENST00000457035 GARTP22102 1010 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 TNFSF9P41273 254 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 MATR3P43243 847 aaKnown RBP eCLIP10.97□□□□□ -0.65
ATG4A-206ENST00000457035 SCNN1GP51170 649 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 DSC1Q08554 894 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 DSG2Q14126 1118 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 NAB2Q15742 525 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 ZBTB41Q5SVQ8 909 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 CRELD2Q6UXH1 353 aaPredicted RBP10.97□□□□□ -0.65
ATG4A-206ENST00000457035 PLPP6Q8IY26 295 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 COLGALT2Q8IYK4 626 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 SYCP3Q8IZU3 236 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 ZSWIM2Q8NEG5 633 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 URGCPQ8TCY9 931 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 MSTO1Q9BUK6 570 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 CCDC94Q9BW85 323 aaPredicted RBP10.97□□□□□ -0.65
ATG4A-206ENST00000457035 PLVAPQ9BX97 442 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 GBP3Q9H0R5 595 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 HOOK1Q9UJC3 728 aaKnown RBP10.97□□□□□ -0.65
ATG4A-206ENST00000457035 AGO2Q9UKV8 859 aaKnown RBP10.97□□□□□ -0.65
ATG4A-206ENST00000457035 MTUS1Q9ULD2 1270 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 COL4A4P53420 1690 aaPredicted RBP10.97□□□□□ -0.65
ATG4A-206ENST00000457035 ATG2AQ2TAZ0 1938 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 SCN1AP35498 2009 aa10.97□□□□□ -0.65
ATG4A-206ENST00000457035 UBE4BO95155 1302 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 SMIM28A0A1B0GU29 152 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 TTC26A0AVF1 554 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 H3BNC9 293 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 SMC2O95347 1197 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 GALTP07902 379 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 LAG3P18627 525 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 CTNNB1P35222 781 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 ACOT2P49753 483 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 BCAR1P56945 870 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 SNRPFP62306 86 aaKnown RBP10.96□□□□□ -0.65
ATG4A-206ENST00000457035 RNASELQ05823 741 aaKnown RBP10.96□□□□□ -0.65
ATG4A-206ENST00000457035 ADGRE1Q14246 886 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 KYAT1Q16773 422 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 KNOP1Q1ED39 458 aaKnown RBP10.96□□□□□ -0.65
ATG4A-206ENST00000457035 TJAP1Q5JTD0 557 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 SPOUT1Q5T280 376 aaKnown RBP10.96□□□□□ -0.65
ATG4A-206ENST00000457035 KCNT2Q6UVM3 1135 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 NELFCDQ8IXH7 590 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 KLHL23Q8NBE8 558 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 COLGALT1Q8NBJ5 622 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 POMGNT1Q8WZA1 660 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 P2RX5Q93086 422 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 CCDC47Q96A33 483 aaKnown RBP10.96□□□□□ -0.65
ATG4A-206ENST00000457035 ZMAT2Q96NC0 199 aaKnown RBP10.96□□□□□ -0.65
ATG4A-206ENST00000457035 PPP1R10Q96QC0 940 aaKnown RBP10.96□□□□□ -0.65
ATG4A-206ENST00000457035 CBWD1Q9BRT8 395 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 KCTD10Q9H3F6 313 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 PLEKHA5Q9HAU0 1116 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 AAASQ9NRG9 546 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 DNAJB4Q9UDY4 337 aa10.96□□□□□ -0.65
ATG4A-206ENST00000457035 CPSF3Q9UKF6 684 aaKnown RBP10.96□□□□□ -0.65
ATG4A-206ENST00000457035 PCDHB12Q9Y5F1 795 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms