RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 RPL21P46778 160 aaKnown RBP13.33□□□□□ -0.28
LINC00959-201ENST00000456581 JAK3P52333 1124 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 ADCY1Q08828 1119 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 RUFY4Q6ZNE9 571 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 JAMLQ86YT9 394 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 CBWD2Q8IUF1 395 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 SULF1Q8IWU6 871 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 MGARPQ8TDB4 240 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 RFFLQ8WZ73 363 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 TATDN2Q93075 761 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 GPRASP2Q96D09 838 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 HSPBP1Q9NZL4 362 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 SEPT9Q9UHD8 586 aaPredicted RBP13.33□□□□□ -0.28
LINC00959-201ENST00000456581 ALG6Q9Y672 507 aa13.33□□□□□ -0.28
LINC00959-201ENST00000456581 EIF4E1BA6NMX2 242 aaKnown RBP13.32□□□□□ -0.28
LINC00959-201ENST00000456581 FERP16591 822 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 MESDQ14696 234 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 NOL9Q5SY16 702 aaKnown RBP13.32□□□□□ -0.28
LINC00959-201ENST00000456581 C1orf220Q5T0J3 134 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 DAB2IPQ5VWQ8 1189 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 CACNA2D3Q8IZS8 1091 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 CCDC127Q96BQ5 260 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 DCPSQ96C86 337 aaKnown RBP13.32□□□□□ -0.28
LINC00959-201ENST00000456581 SLITRK6Q9H5Y7 841 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 SLC9A2Q9UBY0 812 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 L3MBTL1Q9Y468 752 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 DAAM1Q9Y4D1 1078 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 TNFAIP3P21580 790 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 SMTNP53814 917 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 OAZ1P54368 228 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 PTENP60484 403 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 PRKCEQ02156 737 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 BIRC3Q13489 604 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 MTERF2Q49AM1 385 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 FAM133BQ5BKY9 247 aaKnown RBP13.32□□□□□ -0.28
LINC00959-201ENST00000456581 DUPD1Q68J44 220 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 CCDC91Q7Z6B0 441 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 NCAPG2Q86XI2 1143 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 ARFGAP2Q8N6H7 521 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 TMEM161BQ8NDZ6 487 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 ACCSQ96QU6 501 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 PRMT1Q99873 361 aaKnown RBP13.32□□□□□ -0.28
LINC00959-201ENST00000456581 ERP44Q9BS26 406 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 SYT11Q9BT88 431 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 UBE2TQ9NPD8 197 aaPredicted RBP13.32□□□□□ -0.28
LINC00959-201ENST00000456581 XPNPEP1Q9NQW7 623 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 TOPORSQ9NS56 1045 aaPredicted RBP13.32□□□□□ -0.28
LINC00959-201ENST00000456581 CTTNBP2NLQ9P2B4 639 aa13.32□□□□□ -0.28
LINC00959-201ENST00000456581 DICER1Q9UPY3 1922 aaKnown RBP13.32□□□□□ -0.28
LINC00959-201ENST00000456581 DENND3A2RUS2 1198 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 A6NNZ2 444 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 PPFIA2O75334 1257 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 SKAP2O75563 359 aaPredicted RBP13.31□□□□□ -0.28
LINC00959-201ENST00000456581 FTLP02792 175 aaPredicted RBP13.31□□□□□ -0.28
LINC00959-201ENST00000456581 PGK2P07205 417 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 MMEP08473 750 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 ATP4AP20648 1035 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 SFNP31947 248 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 PMS2P54278 862 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 MYL7Q01449 175 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 TTLL12Q14166 644 aaPredicted RBP13.31□□□□□ -0.28
LINC00959-201ENST00000456581 TUBB8Q3ZCM7 444 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 YTHDF3Q7Z739 585 aaKnown RBP13.31□□□□□ -0.28
LINC00959-201ENST00000456581 LRRC34Q8IZ02 419 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 PRELID2Q8N945 189 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 LMBR1Q8WVP7 490 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 PWWP2AQ96N64 755 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 TXLNGYQ9BZA5 131 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 ADARB2Q9NS39 739 aaKnown RBP13.31□□□□□ -0.28
LINC00959-201ENST00000456581 AGAP1Q9UPQ3 857 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 CSADQ9Y600 493 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 LOXHD1Q8IVV2 1947 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 KIAA0391O15091 583 aaKnown RBP13.31□□□□□ -0.28
LINC00959-201ENST00000456581 GTF2BQ00403 316 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 C9orf131Q5VYM1 1079 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 LBX2Q6XYB7 198 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 SYCE1Q8N0S2 351 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 SEC14L1Q92503 715 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 HVCN1Q96D96 273 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 XPO6Q96QU8 1125 aaKnown RBP13.31□□□□□ -0.28
LINC00959-201ENST00000456581 MKNK1Q9BUB5 465 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 STK33Q9BYT3 514 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 TXNRD2Q9NNW7 524 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 GRHL1Q9NZI5 618 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 MCM3APO60318 1980 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 A8MUI8 341 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 ATP2A1O14983 1001 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 TMEM253P0C7T8 217 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 NFIL3Q16649 462 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 C2CD6Q53TS8 623 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 SLC39A4Q6P5W5 647 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 LMO3Q8TAP4 145 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 CCT6BQ92526 530 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 TMEM143Q96AN5 459 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 PCDHB18PQ96TA0 734 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 FAM118BQ9BPY3 351 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 ELAC2Q9BQ52 826 aaKnown RBP13.31□□□□□ -0.28
LINC00959-201ENST00000456581 DDX23Q9BUQ8 820 aaKnown RBP13.31□□□□□ -0.28
LINC00959-201ENST00000456581 ABCF3Q9NUQ8 709 aa13.31□□□□□ -0.28
LINC00959-201ENST00000456581 APEX2Q9UBZ4 518 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms