RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 TMEM173Q86WV6 379 aaPredicted RBP9.28□□□□□ -0.92
SP140-207ENST00000456542 BCL7CQ8WUZ0 217 aaPredicted RBP9.28□□□□□ -0.92
SP140-207ENST00000456542 PPM1EQ8WY54 764 aa9.28□□□□□ -0.92
SP140-207ENST00000456542 PPP1R10Q96QC0 940 aaKnown RBP9.28□□□□□ -0.92
SP140-207ENST00000456542 TSPAN18Q96SJ8 248 aa9.28□□□□□ -0.92
SP140-207ENST00000456542 FGFBP2Q9BYJ0 223 aa9.28□□□□□ -0.92
SP140-207ENST00000456542 BLZF1Q9H2G9 400 aa9.28□□□□□ -0.92
SP140-207ENST00000456542 PLEKHA5Q9HAU0 1116 aa9.28□□□□□ -0.92
SP140-207ENST00000456542 NGRNQ9NPE2 291 aaKnown RBP9.28□□□□□ -0.92
SP140-207ENST00000456542 SLC38A7Q9NVC3 462 aa9.28□□□□□ -0.92
SP140-207ENST00000456542 CNTN3Q9P232 1028 aa9.28□□□□□ -0.92
SP140-207ENST00000456542 COG5Q9UP83 839 aa9.28□□□□□ -0.92
SP140-207ENST00000456542 IRAK3Q9Y616 596 aa9.28□□□□□ -0.92
SP140-207ENST00000456542 TRANK1O15050 2925 aa9.28□□□□□ -0.92
SP140-207ENST00000456542 SMIM28A0A1B0GU29 152 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 TTC26A0AVF1 554 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 ANKRD63C9JTQ0 380 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 TMEM189-UBE2V1I3L0A0 370 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 KIAA0391O15091 583 aaKnown RBP9.27□□□□□ -0.93
SP140-207ENST00000456542 NCK2O43639 380 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 KLRC4O43908 158 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 EFEMP2O95967 443 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 ADRB2P07550 413 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 GARTP22102 1010 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 CASP1P29466 404 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 IRS1P35568 1242 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 OR1G1P47890 313 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 ERVFC1P60507 584 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 FAM160A1Q05DH4 1040 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 KCNA1Q09470 495 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 COL19A1Q14993 1142 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 SLC10A6Q3KNW5 377 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 TCEAL5Q5H9L2 206 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 GLRA4Q5JXX5 417 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 EPM2AIP1Q7L775 607 aaPredicted RBP9.27□□□□□ -0.93
SP140-207ENST00000456542 CD302Q8IX05 232 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 GRAMD1CQ8IYS0 662 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 RNF168Q8IYW5 571 aaPredicted RBP9.27□□□□□ -0.93
SP140-207ENST00000456542 SYCP3Q8IZU3 236 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 FMR1NBQ8N0W7 255 aaPredicted RBP9.27□□□□□ -0.93
SP140-207ENST00000456542 TMEM87AQ8NBN3 555 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 ENGASEQ8NFI3 743 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 ZNF507Q8TCN5 953 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 MICAL1Q8TDZ2 1067 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 UROC1Q96N76 676 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 TCF25Q9BQ70 676 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 MSTO1Q9BUK6 570 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 COLEC11Q9BWP8 271 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 ZBP1Q9H171 429 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 CXCL16Q9H2A7 254 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 ENTPD7Q9NQZ7 604 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 MARCH5Q9NX47 278 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 CPSF3Q9UKF6 684 aaKnown RBP9.27□□□□□ -0.93
SP140-207ENST00000456542 PRG3Q9Y2Y8 225 aaPredicted RBP9.27□□□□□ -0.93
SP140-207ENST00000456542 VWA8A3KMH1 1905 aa9.27□□□□□ -0.93
SP140-207ENST00000456542 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 TISP43B9A030 160 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 MEFVO15553 781 aaPredicted RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 PRPF6O94906 941 aaKnown RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 LDHAP00338 332 aaKnown RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 SOD2P04179 222 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 CXCL8P10145 99 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 CTSAP10619 480 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 ADSSP30520 456 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 TNFSF9P41273 254 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 SNRPFP62306 86 aaKnown RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 PPP2R3AQ06190 1150 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 DPYDQ12882 1025 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 PSMD2Q13200 908 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 SNW1Q13573 536 aaKnown RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 HSP90AA2PQ14568 343 aaPredicted RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 SMC1AQ14683 1233 aaKnown RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 SKIV2LQ15477 1246 aaKnown RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 BMT2Q1RMZ1 405 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 SEZ6Q53EL9 994 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 TMC7Q7Z402 723 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 GPR65Q8IYL9 337 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 VPS52Q8N1B4 723 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 GLIS3Q8NEA6 775 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 POMGNT1Q8WZA1 660 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 HLA-CQ95604 372 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 HPS3Q969F9 1004 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 CCDC47Q96A33 483 aaKnown RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 PABPC5Q96DU9 382 aaKnown RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 DDX27Q96GQ7 796 aaKnown RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 TIGD1Q96MW7 591 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 ZMAT2Q96NC0 199 aaKnown RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 CDCA3Q99618 268 aaPredicted RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 HERC2P3Q9BVR0 1158 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 VN1R3Q9BXE9 311 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 ASB7Q9H672 318 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 RPF1Q9H9Y2 349 aaKnown RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 EXOC1Q9NV70 894 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 THEGQ9P2T0 379 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 ADAM28Q9UKQ2 775 aa9.26□□□□□ -0.93
SP140-207ENST00000456542 AGO2Q9UKV8 859 aaKnown RBP9.26□□□□□ -0.93
SP140-207ENST00000456542 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.25□□□□□ -0.93
SP140-207ENST00000456542 C2orf71A6NGG8 1288 aa9.25□□□□□ -0.93
SP140-207ENST00000456542 CASTOR2A6NHX0 329 aa9.25□□□□□ -0.93
SP140-207ENST00000456542 XPOTO43592 962 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms