RNA–Protein interactions for RNA: ENST00000456224.7

SCN11A-203, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-203ENST00000456224 CAPN9O14815 690 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 KRT14P02533 472 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 MMEP08473 750 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 SUPT20HL2P0C7V6 817 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 TRIM49P0CI25 452 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 TRIM49CP0CI26 452 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 ACTN1P12814 892 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 MDH1P40925 334 aaKnown RBP5.28□□□□□ -1.56
SCN11A-203ENST00000456224 CDR2Q01850 454 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 IFRD2Q12894 506 aaPredicted RBP5.28□□□□□ -1.56
SCN11A-203ENST00000456224 SPP2Q13103 211 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 SNX1Q13596 522 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 SPARCL1Q14515 664 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 EAPPQ56P03 285 aaPredicted RBP5.28□□□□□ -1.56
SCN11A-203ENST00000456224 ADAT2Q7Z6V5 191 aaKnown RBP5.28□□□□□ -1.56
SCN11A-203ENST00000456224 SLC9A9Q8IVB4 645 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 SEPT1Q8WYJ6 367 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 FUT8Q9BYC5 575 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 EFCC1Q9HA90 598 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 SLC38A10Q9HBR0 1119 aa5.28□□□□□ -1.56
SCN11A-203ENST00000456224 DDX4Q9NQI0 724 aaKnown RBP5.28□□□□□ -1.56
SCN11A-203ENST00000456224 CNOT7Q9UIV1 285 aaKnown RBP5.28□□□□□ -1.56
SCN11A-203ENST00000456224 SMG5Q9UPR3 1016 aaKnown RBP5.28□□□□□ -1.56
SCN11A-203ENST00000456224 LRRD1A4D1F6 860 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 CFAP69A5D8W1 941 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 CYP26A1O43174 497 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 PSMD3O43242 534 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 SORBS3O60504 671 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 GH1P01241 217 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 RPLP2P05387 115 aaKnown RBP5.27□□□□□ -1.57
SCN11A-203ENST00000456224 DPEP1P16444 411 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 ECE1P42892 770 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 ZNF131P52739 623 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 BACE1P56817 501 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 ROR1Q01973 937 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 KRT17Q04695 432 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 GABPAQ06546 454 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 ZNF484Q5JVG2 852 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 OR6B2Q6IFH4 312 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 PDIK1LQ8N165 341 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 SLC10A4Q96EP9 437 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 KATNAL1Q9BW62 490 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 TRIM10Q9UDY6 481 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 NAGPAQ9UK23 515 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 NOD1Q9Y239 953 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 STRCP1A6NGW2 1772 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 TOMM70O94826 608 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 SLC9A1P19634 815 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 ATICP31939 592 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 CLK2P49760 499 aaKnown RBP5.27□□□□□ -1.57
SCN11A-203ENST00000456224 IGBP1P78318 339 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 MAP7D1Q3KQU3 841 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 WDR49Q8IV35 697 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 MTMR14Q8NCE2 650 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 MGARPQ8TDB4 240 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 PYROXD1Q8WU10 500 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 APBB2Q92870 758 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 SAAL1Q96ER3 474 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 VCXQ9H320 206 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 TMEM51Q9NW97 253 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 FAM198AQ9UFP1 575 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 HACL1Q9UJ83 578 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 COL1A1P02452 1464 aaPredicted RBP5.27□□□□□ -1.57
SCN11A-203ENST00000456224 COL16A1Q07092 1604 aaPredicted RBP5.27□□□□□ -1.57
SCN11A-203ENST00000456224 RAD51CO43502 376 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 HBP1O60381 514 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 MT-ND3P03897 115 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 DSG3P32926 999 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 HNRNPH2P55795 449 aaKnown RBP5.27□□□□□ -1.57
SCN11A-203ENST00000456224 YWHAGP61981 247 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCN11A-203ENST00000456224 CYP24A1Q07973 514 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 SNAPC2Q13487 334 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 BAATQ14032 418 aaPredicted RBP5.27□□□□□ -1.57
SCN11A-203ENST00000456224 ARHGEF6Q15052 776 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 C12orf56Q8IXR9 622 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 CHMP6Q96FZ7 201 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 PRDM16Q9HAZ2 1276 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 GPBP1L1Q9HC44 474 aaPredicted RBP5.27□□□□□ -1.57
SCN11A-203ENST00000456224 FGFR1OP2Q9NVK5 253 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 PRMT7Q9NVM4 692 aaPredicted RBP5.27□□□□□ -1.57
SCN11A-203ENST00000456224 INTS13Q9NVM9 706 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 ARHGAP20Q9P2F6 1191 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 MYPNQ86TC9 1320 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 IQCA1LA6NCM1 817 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 NKRFO15226 690 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCN11A-203ENST00000456224 PSMD10O75832 226 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 IFNB1P01574 187 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 SRGAP2CP0DJJ0 459 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 CHRM1P11229 460 aaPredicted RBP5.27□□□□□ -1.57
SCN11A-203ENST00000456224 ACADSBP45954 432 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 EN1Q05925 392 aaPredicted RBP5.27□□□□□ -1.57
SCN11A-203ENST00000456224 CLEC16AQ2KHT3 1053 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 SMIM5Q71RC9 77 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 EPM2AIP1Q7L775 607 aaPredicted RBP5.27□□□□□ -1.57
SCN11A-203ENST00000456224 CEP57Q86XR8 500 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 SIX6OS1Q8N1H7 587 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 ATP11CQ8NB49 1132 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 ETNPPLQ8TBG4 499 aa5.27□□□□□ -1.57
SCN11A-203ENST00000456224 ALKBH8Q96BT7 664 aaKnown RBP5.27□□□□□ -1.57
SCN11A-203ENST00000456224 VCPIP1Q96JH7 1222 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms