RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 TMEM175Q9BSA9 504 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 TOPORSQ9NS56 1045 aaPredicted RBP16.04■□□□□ 0.16
CLCN1-203ENST00000455478 SPG21Q9NZD8 308 aa16.04■□□□□ 0.16
CLCN1-203ENST00000455478 AGO2Q9UKV8 859 aaKnown RBP16.04■□□□□ 0.16
CLCN1-203ENST00000455478 UBE4BO95155 1302 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 SMIM28A0A1B0GU29 152 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 TGFB1I1O43294 461 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 KINO60870 393 aaKnown RBP16.03■□□□□ 0.16
CLCN1-203ENST00000455478 ALDH2P05091 517 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 THP07101 528 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 CXCL8P10145 99 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 GARTP22102 1010 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 CAMK1Q14012 370 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 ENOX2Q16206 610 aaKnown RBP16.03■□□□□ 0.16
CLCN1-203ENST00000455478 KYAT1Q16773 422 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 CRELD2Q6UXH1 353 aaPredicted RBP16.03■□□□□ 0.16
CLCN1-203ENST00000455478 TMEM173Q86WV6 379 aaPredicted RBP16.03■□□□□ 0.16
CLCN1-203ENST00000455478 NELFCDQ8IXH7 590 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 ZSWIM2Q8NEG5 633 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 SPATA20Q8TB22 786 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 BCL7CQ8WUZ0 217 aaPredicted RBP16.03■□□□□ 0.16
CLCN1-203ENST00000455478 POMGNT1Q8WZA1 660 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 ERCC4Q92889 916 aaPredicted RBP16.03■□□□□ 0.16
CLCN1-203ENST00000455478 ZMAT2Q96NC0 199 aaKnown RBP16.03■□□□□ 0.16
CLCN1-203ENST00000455478 PPP1R10Q96QC0 940 aaKnown RBP16.03■□□□□ 0.16
CLCN1-203ENST00000455478 CBWD1Q9BRT8 395 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 LMBRD1Q9NUN5 540 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 LMCD1Q9NZU5 365 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 CNTN3Q9P232 1028 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 CPSF3Q9UKF6 684 aaKnown RBP16.03■□□□□ 0.16
CLCN1-203ENST00000455478 STXBP5LQ9Y2K9 1186 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 FAN1Q9Y2M0 1017 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 PCDHA5Q9Y5H7 936 aa16.03■□□□□ 0.16
CLCN1-203ENST00000455478 TTC26A0AVF1 554 aa16.02■□□□□ 0.16
CLCN1-203ENST00000455478 NRP1O14786 923 aa16.02■□□□□ 0.16
CLCN1-203ENST00000455478 ADRB2P07550 413 aa16.02■□□□□ 0.16
CLCN1-203ENST00000455478 KCNE1P15382 129 aa16.02■□□□□ 0.16
CLCN1-203ENST00000455478 PPM1AP35813 382 aa16.02■□□□□ 0.16
CLCN1-203ENST00000455478 ACOT2P49753 483 aa16.02■□□□□ 0.16
CLCN1-203ENST00000455478 TUSC3Q13454 348 aa16.02■□□□□ 0.16
CLCN1-203ENST00000455478 GLRA4Q5JXX5 417 aa16.02■□□□□ 0.16
CLCN1-203ENST00000455478 CCDC47Q96A33 483 aaKnown RBP16.02■□□□□ 0.16
CLCN1-203ENST00000455478 MRPL38Q96DV4 380 aaKnown RBP16.02■□□□□ 0.16
CLCN1-203ENST00000455478 IGSF21Q96ID5 467 aa16.02■□□□□ 0.16
CLCN1-203ENST00000455478 GBP4Q96PP9 640 aa16.02■□□□□ 0.16
CLCN1-203ENST00000455478 LMAN2LQ9H0V9 348 aa16.02■□□□□ 0.16
CLCN1-203ENST00000455478 PLEKHA5Q9HAU0 1116 aa16.02■□□□□ 0.16
CLCN1-203ENST00000455478 CACNG4Q9UBN1 327 aa16.02■□□□□ 0.16
CLCN1-203ENST00000455478 CARNS1A5YM72 827 aa16.01■□□□□ 0.15
CLCN1-203ENST00000455478 LACTBL1A8MY62 500 aa16.01■□□□□ 0.15
CLCN1-203ENST00000455478 OR1G1P47890 313 aa16.01■□□□□ 0.15
CLCN1-203ENST00000455478 UBE3AQ05086 875 aa16.01■□□□□ 0.15
CLCN1-203ENST00000455478 KNOP1Q1ED39 458 aaKnown RBP16.01■□□□□ 0.15
CLCN1-203ENST00000455478 POF1BQ8WVV4 589 aa16.01■□□□□ 0.15
CLCN1-203ENST00000455478 RABGGTAQ92696 567 aa16.01■□□□□ 0.15
CLCN1-203ENST00000455478 SAAL1Q96ER3 474 aa16.01■□□□□ 0.15
CLCN1-203ENST00000455478 GSDMAQ96QA5 445 aa16.01■□□□□ 0.15
CLCN1-203ENST00000455478 PAAF1Q9BRP4 392 aa16.01■□□□□ 0.15
CLCN1-203ENST00000455478 PCIF1Q9H4Z3 704 aa16.01■□□□□ 0.15
CLCN1-203ENST00000455478 RPF1Q9H9Y2 349 aaKnown RBP16.01■□□□□ 0.15
CLCN1-203ENST00000455478 AGPAT3Q9NRZ7 376 aa16.01■□□□□ 0.15
CLCN1-203ENST00000455478 MARCH5Q9NX47 278 aa16.01■□□□□ 0.15
CLCN1-203ENST00000455478 HOOK1Q9UJC3 728 aaKnown RBP16.01■□□□□ 0.15
CLCN1-203ENST00000455478 LZTS1Q9Y250 596 aa16.01■□□□□ 0.15
CLCN1-203ENST00000455478 ATG2AQ2TAZ0 1938 aa16.01■□□□□ 0.15
CLCN1-203ENST00000455478 PDCD11Q14690 1871 aaKnown RBP16.01■□□□□ 0.15
CLCN1-203ENST00000455478 REV3LO60673 3130 aa16■□□□□ 0.15
CLCN1-203ENST00000455478 ANK1P16157 1881 aa16■□□□□ 0.15
CLCN1-203ENST00000455478 F8W810 466 aa16■□□□□ 0.15
CLCN1-203ENST00000455478 SMC2O95347 1197 aa16■□□□□ 0.15
CLCN1-203ENST00000455478 EFEMP2O95967 443 aa16■□□□□ 0.15
CLCN1-203ENST00000455478 ERVFC1P60507 584 aa16■□□□□ 0.15
CLCN1-203ENST00000455478 SNRPFP62306 86 aaKnown RBP16■□□□□ 0.15
CLCN1-203ENST00000455478 POU5F1Q01860 360 aaKnown RBP16■□□□□ 0.15
CLCN1-203ENST00000455478 KRT17Q04695 432 aa16■□□□□ 0.15
CLCN1-203ENST00000455478 SOX4Q06945 474 aaPredicted RBP16■□□□□ 0.15
CLCN1-203ENST00000455478 ZBTB6Q15916 424 aa16■□□□□ 0.15
CLCN1-203ENST00000455478 PTPROQ16827 1216 aa16■□□□□ 0.15
CLCN1-203ENST00000455478 ARMCX5Q6P1M9 558 aa16■□□□□ 0.15
CLCN1-203ENST00000455478 FAM213AQ9BRX8 229 aa16■□□□□ 0.15
CLCN1-203ENST00000455478 VN1R3Q9BXE9 311 aa16■□□□□ 0.15
CLCN1-203ENST00000455478 KCTD10Q9H3F6 313 aa16■□□□□ 0.15
CLCN1-203ENST00000455478 PRG3Q9Y2Y8 225 aaPredicted RBP16■□□□□ 0.15
CLCN1-203ENST00000455478 COL6A3P12111 3177 aa15.99■□□□□ 0.15
CLCN1-203ENST00000455478 GOLGA8IPA6NC78 632 aa15.99■□□□□ 0.15
CLCN1-203ENST00000455478 CASTOR2A6NHX0 329 aa15.99■□□□□ 0.15
CLCN1-203ENST00000455478 GOLGA8JA6NMD2 632 aa15.99■□□□□ 0.15
CLCN1-203ENST00000455478 CLIC2O15247 247 aa15.99■□□□□ 0.15
CLCN1-203ENST00000455478 EXTL3O43909 919 aa15.99■□□□□ 0.15
CLCN1-203ENST00000455478 LDHAP00338 332 aaKnown RBP15.99■□□□□ 0.15
CLCN1-203ENST00000455478 IGFBP6P24592 240 aaPredicted RBP15.99■□□□□ 0.15
CLCN1-203ENST00000455478 IRS1P35568 1242 aa15.99■□□□□ 0.15
CLCN1-203ENST00000455478 SPAG1Q07617 926 aa15.99■□□□□ 0.15
CLCN1-203ENST00000455478 DDX53Q86TM3 631 aaKnown RBP15.99■□□□□ 0.15
CLCN1-203ENST00000455478 CD302Q8IX05 232 aa15.99■□□□□ 0.15
CLCN1-203ENST00000455478 SMARCE1Q969G3 411 aa15.99■□□□□ 0.15
CLCN1-203ENST00000455478 C18orf25Q96B23 403 aaPredicted RBP15.99■□□□□ 0.15
CLCN1-203ENST00000455478 TMEM169Q96HH4 297 aa15.99■□□□□ 0.15
CLCN1-203ENST00000455478 COLEC11Q9BWP8 271 aa15.99■□□□□ 0.15
CLCN1-203ENST00000455478 GOLGA2P5Q9HBQ8 144 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms