RNA–Protein interactions for RNA: ENST00000454108.5

CALD1-212, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-212ENST00000454108 PDXDC1Q6P996 788 aa17.32■□□□□ 0.36
CALD1-212ENST00000454108 GPR152Q8TDT2 470 aa17.32■□□□□ 0.36
CALD1-212ENST00000454108 CLSTN3Q9BQT9 956 aa17.32■□□□□ 0.36
CALD1-212ENST00000454108 TBC1D17Q9HA65 648 aa17.32■□□□□ 0.36
CALD1-212ENST00000454108 FRYLO94915 3013 aa17.32■□□□□ 0.36
CALD1-212ENST00000454108 ANHXE9PGG2 379 aa17.31■□□□□ 0.36
CALD1-212ENST00000454108 EDN1P05305 212 aa17.31■□□□□ 0.36
CALD1-212ENST00000454108 C8AP07357 584 aa17.31■□□□□ 0.36
CALD1-212ENST00000454108 HNRNPA1P09651 372 aaKnown RBP eCLIP17.31■□□□□ 0.36
CALD1-212ENST00000454108 MUTP22033 750 aa17.31■□□□□ 0.36
CALD1-212ENST00000454108 GNL2Q13823 731 aaKnown RBP17.31■□□□□ 0.36
CALD1-212ENST00000454108 NAB2Q15742 525 aa17.31■□□□□ 0.36
CALD1-212ENST00000454108 PPM1LQ5SGD2 360 aa17.31■□□□□ 0.36
CALD1-212ENST00000454108 GRASPQ7Z6J2 395 aaPredicted RBP17.31■□□□□ 0.36
CALD1-212ENST00000454108 CCDC83Q8IWF9 413 aa17.31■□□□□ 0.36
CALD1-212ENST00000454108 LNX1Q8TBB1 728 aaPredicted RBP17.31■□□□□ 0.36
CALD1-212ENST00000454108 IFT74Q96LB3 600 aa17.31■□□□□ 0.36
CALD1-212ENST00000454108 KIFC3Q9BVG8 833 aa17.31■□□□□ 0.36
CALD1-212ENST00000454108 CXCL16Q9H2A7 254 aa17.31■□□□□ 0.36
CALD1-212ENST00000454108 FOXP1Q9H334 677 aaPredicted RBP17.31■□□□□ 0.36
CALD1-212ENST00000454108 USP20Q9Y2K6 914 aa17.31■□□□□ 0.36
CALD1-212ENST00000454108 GDAQ9Y2T3 454 aa17.31■□□□□ 0.36
CALD1-212ENST00000454108 ZFP37Q9Y6Q3 630 aaPredicted RBP17.31■□□□□ 0.36
CALD1-212ENST00000454108 NUMBLQ9Y6R0 609 aa17.31■□□□□ 0.36
CALD1-212ENST00000454108 CITO14578 2027 aa17.3■□□□□ 0.36
CALD1-212ENST00000454108 EFNA5P52803 228 aa17.3■□□□□ 0.36
CALD1-212ENST00000454108 TTC38Q5R3I4 469 aa17.3■□□□□ 0.36
CALD1-212ENST00000454108 EEF1DP3Q658K8 133 aa17.3■□□□□ 0.36
CALD1-212ENST00000454108 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.3■□□□□ 0.36
CALD1-212ENST00000454108 KIFAP3Q92845 792 aa17.3■□□□□ 0.36
CALD1-212ENST00000454108 SNX27Q96L92 541 aa17.3■□□□□ 0.36
CALD1-212ENST00000454108 ARHGEF3Q9NR81 526 aa17.3■□□□□ 0.36
CALD1-212ENST00000454108 POLIQ9UNA4 740 aa17.3■□□□□ 0.36
CALD1-212ENST00000454108 CCL16O15467 120 aa17.29■□□□□ 0.36
CALD1-212ENST00000454108 XYLBO75191 536 aa17.29■□□□□ 0.36
CALD1-212ENST00000454108 HOXA9P31269 272 aa17.29■□□□□ 0.36
CALD1-212ENST00000454108 CCT6AP40227 531 aaKnown RBP17.29■□□□□ 0.36
CALD1-212ENST00000454108 GLRA4Q5JXX5 417 aa17.29■□□□□ 0.36
CALD1-212ENST00000454108 ATF7IP2Q5U623 682 aa17.29■□□□□ 0.36
CALD1-212ENST00000454108 APBB1IPQ7Z5R6 666 aaPredicted RBP17.29■□□□□ 0.36
CALD1-212ENST00000454108 ST13P5Q8NFI4 369 aaPredicted RBP17.29■□□□□ 0.36
CALD1-212ENST00000454108 SLC7A14Q8TBB6 771 aa17.29■□□□□ 0.36
CALD1-212ENST00000454108 LLPHQ9BRT6 129 aaKnown RBP17.29■□□□□ 0.36
CALD1-212ENST00000454108 BHMT2Q9H2M3 363 aa17.29■□□□□ 0.36
CALD1-212ENST00000454108 SLC2A4RGQ9NR83 387 aa17.29■□□□□ 0.36
CALD1-212ENST00000454108 PPP4R2Q9NY27 417 aa17.29■□□□□ 0.36
CALD1-212ENST00000454108 DAXXQ9UER7 740 aaPredicted RBP17.29■□□□□ 0.36
CALD1-212ENST00000454108 CDH7Q9ULB5 785 aa17.29■□□□□ 0.36
CALD1-212ENST00000454108 LIMCH1Q9UPQ0 1083 aa17.29■□□□□ 0.36
CALD1-212ENST00000454108 DCHS1Q96JQ0 3298 aa17.29■□□□□ 0.36
CALD1-212ENST00000454108 GVINP1Q7Z2Y8 2422 aa17.29■□□□□ 0.36
CALD1-212ENST00000454108 ZNF292O60281 2723 aa17.28■□□□□ 0.36
CALD1-212ENST00000454108 MYH11P35749 1972 aa17.28■□□□□ 0.36
CALD1-212ENST00000454108 DMXL1Q9Y485 3027 aa17.28■□□□□ 0.36
CALD1-212ENST00000454108 TMEM189-UBE2V1I3L0A0 370 aa17.28■□□□□ 0.36
CALD1-212ENST00000454108 ADAM12O43184 909 aa17.28■□□□□ 0.36
CALD1-212ENST00000454108 TRAPPC10P48553 1259 aa17.28■□□□□ 0.36
CALD1-212ENST00000454108 RBM25P49756 843 aaKnown RBP17.28■□□□□ 0.36
CALD1-212ENST00000454108 FXR2P51116 673 aaKnown RBP eCLIP17.28■□□□□ 0.36
CALD1-212ENST00000454108 NTHL1P78549 312 aa17.28■□□□□ 0.36
CALD1-212ENST00000454108 SPECC1Q5M775 1068 aa17.28■□□□□ 0.36
CALD1-212ENST00000454108 PHLDB3Q6NSJ2 640 aa17.28■□□□□ 0.36
CALD1-212ENST00000454108 ADSSL1Q8N142 457 aa17.28■□□□□ 0.36
CALD1-212ENST00000454108 PPP1R10Q96QC0 940 aaKnown RBP17.28■□□□□ 0.36
CALD1-212ENST00000454108 LRWD1Q9UFC0 647 aa17.28■□□□□ 0.36
CALD1-212ENST00000454108 NOL7Q9UMY1 257 aaKnown RBP17.28■□□□□ 0.36
CALD1-212ENST00000454108 FANCMQ8IYD8 2048 aa17.28■□□□□ 0.36
CALD1-212ENST00000454108 NOTCH4Q99466 2003 aa17.28■□□□□ 0.36
CALD1-212ENST00000454108 PHLPP2Q6ZVD8 1323 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 PDCD11Q14690 1871 aaKnown RBP17.27■□□□□ 0.36
CALD1-212ENST00000454108 B3GAT3O94766 335 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 FGFR3P22607 806 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 OR1D2P34982 312 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 CLCNKBP51801 687 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 HMGN5P82970 282 aaKnown RBP17.27■□□□□ 0.36
CALD1-212ENST00000454108 ECM1Q16610 540 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 AXDND1Q5T1B0 1012 aaPredicted RBP17.27■□□□□ 0.36
CALD1-212ENST00000454108 NT5DC1Q5TFE4 455 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 DCLRE1AQ6PJP8 1040 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 PARM1Q6UWI2 310 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 MTSS1LQ765P7 747 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 FAM184AQ8NB25 1140 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 FBXO18Q8NFZ0 1043 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 FGF14Q92915 247 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 UROC1Q96N76 676 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 POLD4Q9HCU8 107 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 MTRRQ9UBK8 725 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 KIAA1024Q9UPX6 916 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 SIT1Q9Y3P8 196 aa17.27■□□□□ 0.36
CALD1-212ENST00000454108 PATJQ8NI35 1801 aa17.26■□□□□ 0.35
CALD1-212ENST00000454108 K7ERI5 159 aa17.26■□□□□ 0.35
CALD1-212ENST00000454108 TRAPPC3O43617 180 aa17.26■□□□□ 0.35
CALD1-212ENST00000454108 DCNP07585 359 aaKnown RBP17.26■□□□□ 0.35
CALD1-212ENST00000454108 POU2F2P09086 479 aa17.26■□□□□ 0.35
CALD1-212ENST00000454108 YARSP54577 528 aaKnown RBP17.26■□□□□ 0.35
CALD1-212ENST00000454108 RAB33AQ14088 237 aa17.26■□□□□ 0.35
CALD1-212ENST00000454108 NBR1Q14596 966 aa17.26■□□□□ 0.35
CALD1-212ENST00000454108 SNX29Q8TEQ0 813 aa17.26■□□□□ 0.35
CALD1-212ENST00000454108 FGF13Q92913 245 aa17.26■□□□□ 0.35
CALD1-212ENST00000454108 RAB34Q9BZG1 259 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms