RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 MNX1P50219 401 aaPredicted RBP6.5□□□□□ -1.37
SDC4P-201ENST00000453285 MXI1P50539 228 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 CDK7P50613 346 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 JAM2P57087 298 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 CDK17Q00537 523 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 PTK7Q13308 1070 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 HSP90AA2PQ14568 343 aaPredicted RBP6.5□□□□□ -1.37
SDC4P-201ENST00000453285 SURF1Q15526 300 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 PTGISQ16647 500 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 SLC10A6Q3KNW5 377 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 FAM47CQ5HY64 1035 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 FAM26DQ5JW98 314 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 UBXN11Q5T124 520 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 TDRD10Q5VZ19 366 aaKnown RBP6.5□□□□□ -1.37
SDC4P-201ENST00000453285 HGSNATQ68CP4 663 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 LMBRD2Q68DH5 695 aaPredicted RBP6.5□□□□□ -1.37
SDC4P-201ENST00000453285 KRT39Q6A163 491 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 RRAGAQ7L523 313 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 CATSPER4Q7RTX7 472 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 IRF2BP2Q7Z5L9 587 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 FAM228AQ86W67 206 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 TMTC1Q8IUR5 882 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 ARHGEF19Q8IW93 802 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 THNSL1Q8IYQ7 743 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 ZNF397Q8NF99 534 aaPredicted RBP6.5□□□□□ -1.37
SDC4P-201ENST00000453285 OR5B17Q8NGF7 314 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 TAS1R2Q8TE23 839 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 SYN2Q92777 582 aaPredicted RBP6.5□□□□□ -1.37
SDC4P-201ENST00000453285 GLT1D1Q96MS3 346 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 SCLT1Q96NL6 688 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 CGRRF1Q99675 332 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 GPR88Q9GZN0 384 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 SENP6Q9GZR1 1112 aaPredicted RBP6.5□□□□□ -1.37
SDC4P-201ENST00000453285 TRMT13Q9NUP7 481 aaKnown RBP6.5□□□□□ -1.37
SDC4P-201ENST00000453285 SPTLC3Q9NUV7 552 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 AIPL1Q9NZN9 384 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 ARHGAP20Q9P2F6 1191 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 DNAJC12Q9UKB3 198 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 OGDHLQ9ULD0 1010 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 MYO6Q9UM54 1294 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 GINS2Q9Y248 185 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 NOC2LQ9Y3T9 749 aaKnown RBP6.5□□□□□ -1.37
SDC4P-201ENST00000453285 TRPV2Q9Y5S1 764 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 CDY2AQ9Y6F7 541 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 TTC3P53804 2025 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 ALPK3Q96L96 1907 aa6.5□□□□□ -1.37
SDC4P-201ENST00000453285 FNDC1Q4ZHG4 1894 aaPredicted RBP6.49□□□□□ -1.37
SDC4P-201ENST00000453285 USP27XA6NNY8 438 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 LACTBL1A8MY62 500 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 ARVCFO00192 962 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 DNM1LO00429 736 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 NPTXRO95502 500 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 CST3P01034 146 aaPredicted RBP6.49□□□□□ -1.37
SDC4P-201ENST00000453285 HLA-DRAP01903 254 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 RPLP2P05387 115 aaKnown RBP6.49□□□□□ -1.37
SDC4P-201ENST00000453285 PLEKP08567 350 aaPredicted RBP6.49□□□□□ -1.37
SDC4P-201ENST00000453285 CXCL8P10145 99 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 TNNI1P19237 187 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 MSNP26038 577 aaKnown RBP6.49□□□□□ -1.37
SDC4P-201ENST00000453285 GRM5P41594 1212 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 OSTNP61366 133 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 CETN1Q12798 172 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 KYAT1Q16773 422 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 ASTE1Q2TB18 679 aaPredicted RBP6.49□□□□□ -1.37
SDC4P-201ENST00000453285 DCAF4L1Q3SXM0 396 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 SLC9C1Q4G0N8 1177 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 SFMBT2Q5VUG0 894 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 SLC27A1Q6PCB7 646 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 TRAF7Q6Q0C0 670 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 CYP26C1Q6V0L0 522 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 TOGARAM2Q6ZUX3 1019 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 CACNA2D4Q7Z3S7 1137 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 USP37Q86T82 979 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 RSPH3Q86UC2 560 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 WDR49Q8IV35 697 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 REXO1L1PQ8IX06 675 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 EFCAB13Q8IY85 973 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 CCAR2Q8N163 923 aaKnown RBP6.49□□□□□ -1.37
SDC4P-201ENST00000453285 FBXL13Q8NEE6 735 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 OLIG1Q8TAK6 271 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 CXorf38Q8TB03 319 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 HELQQ8TDG4 1101 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 KAT5Q92993 513 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 TATDN2Q93075 761 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 VTI1AQ96AJ9 217 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 KREMEN1Q96MU8 473 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 DEFB118Q96PH6 123 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 FNBP1Q96RU3 617 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 EIF2AQ9BY44 585 aaKnown RBP6.49□□□□□ -1.37
SDC4P-201ENST00000453285 STK33Q9BYT3 514 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 CRISPLD2Q9H0B8 497 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 TRPV6Q9H1D0 765 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 NUCKS1Q9H1E3 243 aaKnown RBP6.49□□□□□ -1.37
SDC4P-201ENST00000453285 CXCL16Q9H2A7 254 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 ASB7Q9H672 318 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 AGO3Q9H9G7 860 aaKnown RBP6.49□□□□□ -1.37
SDC4P-201ENST00000453285 RPF1Q9H9Y2 349 aaKnown RBP6.49□□□□□ -1.37
SDC4P-201ENST00000453285 RNF216Q9NWF9 866 aaPredicted RBP6.49□□□□□ -1.37
SDC4P-201ENST00000453285 RAB20Q9NX57 234 aa6.49□□□□□ -1.37
SDC4P-201ENST00000453285 APEX2Q9UBZ4 518 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms