RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 TLR9Q9NR96 1032 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 AGO2Q9UKV8 859 aaKnown RBP9.68□□□□□ -0.86
COL8A1-203ENST00000452013 SSX2IPQ9Y2D8 614 aa9.68□□□□□ -0.86
COL8A1-203ENST00000452013 TET1Q8NFU7 2136 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 UBE4BO95155 1302 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 FSD2A1L4K1 749 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 GOLGA6L3A6NEY3 463 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 PTGESO14684 152 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 KINO60870 393 aaKnown RBP9.67□□□□□ -0.86
COL8A1-203ENST00000452013 PRPF40AO75400 957 aaKnown RBP9.67□□□□□ -0.86
COL8A1-203ENST00000452013 SMC2O95347 1197 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 CXCL14O95715 111 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 DNAJB1P25685 340 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 RPL9P32969 192 aaKnown RBP9.67□□□□□ -0.86
COL8A1-203ENST00000452013 MRE11P49959 708 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 CASP5P51878 434 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 ERVFC1P60507 584 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 UBE2HP62256 183 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 PPP2R3AQ06190 1150 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 EHHADHQ08426 723 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 KCNA1Q09470 495 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 DPYDQ12882 1025 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 SNW1Q13573 536 aaKnown RBP9.67□□□□□ -0.86
COL8A1-203ENST00000452013 CAMK1Q14012 370 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 SMC1AQ14683 1233 aaKnown RBP9.67□□□□□ -0.86
COL8A1-203ENST00000452013 SLC10A6Q3KNW5 377 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 SEZ6Q53EL9 994 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 SLC39A4Q6P5W5 647 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 EPM2AIP1Q7L775 607 aaPredicted RBP9.67□□□□□ -0.86
COL8A1-203ENST00000452013 HS2ST1Q7LGA3 356 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 VPS52Q8N1B4 723 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 GOLGA5Q8TBA6 731 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 HPS3Q969F9 1004 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 FAM212AQ96EL1 285 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 SNX27Q96L92 541 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 PPP1R10Q96QC0 940 aaKnown RBP9.67□□□□□ -0.86
COL8A1-203ENST00000452013 TCF25Q9BQ70 676 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 GTPBP4Q9BZE4 634 aaKnown RBP9.67□□□□□ -0.86
COL8A1-203ENST00000452013 HAPLN2Q9GZV7 340 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 ASB7Q9H672 318 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 TLE6Q9H808 572 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 KIAA1586Q9HCI6 787 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 ENTPD7Q9NQZ7 604 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 RMND1Q9NWS8 449 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 CNTN3Q9P232 1028 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 CGNQ9P2M7 1197 aaKnown RBP9.67□□□□□ -0.86
COL8A1-203ENST00000452013 CPSF3Q9UKF6 684 aaKnown RBP9.67□□□□□ -0.86
COL8A1-203ENST00000452013 COG5Q9UP83 839 aa9.67□□□□□ -0.86
COL8A1-203ENST00000452013 PRG3Q9Y2Y8 225 aaPredicted RBP9.67□□□□□ -0.86
COL8A1-203ENST00000452013 RANBP2P49792 3224 aaKnown RBP9.66□□□□□ -0.86
COL8A1-203ENST00000452013 TTC26A0AVF1 554 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 LACTBL1A8MY62 500 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 TRAPPC3O43617 180 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 KLRC4O43908 158 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 RHOBTB3O94955 611 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 ADRB2P07550 413 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 CYP3A5P20815 502 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 ADSSP30520 456 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 ACOT2P49753 483 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 ELAVL2Q12926 359 aaKnown RBP9.66□□□□□ -0.86
COL8A1-203ENST00000452013 STK4Q13043 487 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 KCNB1Q14721 858 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 KNOP1Q1ED39 458 aaKnown RBP9.66□□□□□ -0.86
COL8A1-203ENST00000452013 TCEAL5Q5H9L2 206 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 KIAA1841Q6NSI8 718 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 ARMCX5Q6P1M9 558 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 MRPL43Q8N983 215 aaKnown RBP9.66□□□□□ -0.86
COL8A1-203ENST00000452013 SCFD1Q8WVM8 642 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 CDCA3Q99618 268 aaPredicted RBP9.66□□□□□ -0.86
COL8A1-203ENST00000452013 FGFBP2Q9BYJ0 223 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 ADAM28Q9UKQ2 775 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 UBQLN1Q9UMX0 589 aaKnown RBP9.66□□□□□ -0.86
COL8A1-203ENST00000452013 DERAQ9Y315 318 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 TRIOBPQ9H2D6 2365 aa9.66□□□□□ -0.86
COL8A1-203ENST00000452013 CASTOR2A6NHX0 329 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 ZNF233A6NK53 670 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 TULP1O00294 542 aaPredicted RBP9.65□□□□□ -0.86
COL8A1-203ENST00000452013 FSCN2O14926 492 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 EXTL3O43909 919 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 B4GALT3O60512 393 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 GADD45BO75293 160 aaPredicted RBP9.65□□□□□ -0.86
COL8A1-203ENST00000452013 B3GAT3O94766 335 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 IL18RAPO95256 599 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 SOD2P04179 222 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 PRR29P0C7W0 189 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 CXCL8P10145 99 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 CTSAP10619 480 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 PAX3P23760 479 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 CA8P35219 290 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 IRS1P35568 1242 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 TNFSF9P41273 254 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 SURF1Q15526 300 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 NAB2Q15742 525 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 ZBTB6Q15916 424 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 ENOX2Q16206 610 aaKnown RBP9.65□□□□□ -0.86
COL8A1-203ENST00000452013 BMT2Q1RMZ1 405 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 AAK1Q2M2I8 961 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 USP41Q3LFD5 358 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 GLRA4Q5JXX5 417 aa9.65□□□□□ -0.86
COL8A1-203ENST00000452013 PLPP4Q5VZY2 271 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms