RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 DPF3Q92784 378 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 RCC1LQ96I51 464 aaKnown RBP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 KAT14Q9H8E8 782 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 METTL5Q9NRN9 209 aaKnown RBP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 SAMSN1Q9NSI8 373 aaKnown RBP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 CLEC1BQ9P126 229 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 CGGBP1Q9UFW8 167 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 LIMA1Q9UHB6 759 aaKnown RBP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 FBXO2Q9UK22 296 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 MYO6Q9UM54 1294 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 AKT3Q9Y243 479 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 SLC12A7Q9Y666 1083 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 FAM169AQ9Y6X4 670 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 STK36Q9NRP7 1315 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 ARHGAP23Q9P227 1491 aa4.61□□□□□ -1.67
HMGB3P22-202ENST00000451823 TJP1Q07157 1748 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 PKD1L3Q7Z443 1732 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 LAMB4A4D0S4 1761 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 RGPD2P0DJD1 1756 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 ANKRD65E5RJM6 399 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 EBAG9O00559 213 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 RNF113AO15541 343 aaKnown RBP4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 RASSF9O75901 435 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 DDX58O95786 925 aaKnown RBP4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 RHOXF2BP0C7M4 288 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 TNFRSF8P28908 595 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 MAP2K2P36507 400 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 USP8P40818 1118 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 TOB1P50616 345 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 FXR1P51114 621 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 STIM1Q13586 685 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 POSTNQ15063 836 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 PLCB4Q15147 1175 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 MAP9Q49MG5 647 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 PREPLQ4J6C6 727 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 TTLL5Q6EMB2 1281 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 KIAA1211LQ6NV74 962 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 C6orf89Q6UWU4 347 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 ATG9AQ7Z3C6 839 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 VPS37DQ86XT2 251 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 CNGA4Q8IV77 575 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZNF654Q8IZM8 581 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 MMGT1Q8N4V1 131 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 FAM26EQ8N5C1 309 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 ANKRD20A12PQ8NF67 263 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 KLHDC4Q8TBB5 520 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 PLEKHO2Q8TD55 490 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 ADAMTS17Q8TE56 1095 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 KLHL6Q8WZ60 621 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 LOXL4Q96JB6 756 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 CDC5LQ99459 802 aaKnown RBP4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 APBA2Q99767 749 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 GORASP1Q9BQQ3 440 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 RHOXF2Q9BQY4 288 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 C11orf84Q9BUA3 381 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZSWIM4Q9H7M6 989 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 TOMM22Q9NS69 142 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 GJB4Q9NTQ9 266 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 SMPD4Q9NXE4 827 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 BTG4Q9NY30 223 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 KIAA1522Q9P206 1035 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 MCM8Q9UJA3 840 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 ABCC12Q96J65 1359 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 DISP2A7MBM2 1401 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 ATRNO75882 1429 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 TIAM2Q8IVF5 1701 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 ARFGEF2Q9Y6D5 1785 aa4.6□□□□□ -1.67
HMGB3P22-202ENST00000451823 TRBV23OR9-2A0A075B6M9 112 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 KLF18A0A0U1RQI7 1052 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 ANO9A1A5B4 782 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 TMCO5BA8MYB1 307 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 GOLGA8KD6RF30 607 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 M0R2C6 588 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 PRC1O43663 620 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 RTN2O75298 545 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 KCNH1O95259 989 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 MYBL2P10244 700 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 CYP2C8P10632 490 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 PLS3P13797 630 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 PRLRP16471 622 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 MARCKSP29966 332 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 CASP14P31944 242 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 CCT5P48643 541 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 MRPL12P52815 198 aaKnown RBP4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 AFDNP55196 1824 aaKnown RBP4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 ADAM17P78536 824 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 SATB1Q01826 763 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 GRIN1Q05586 938 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 TEFQ10587 303 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 DRP2Q13474 957 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 COL9A2Q14055 689 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 TRIM14Q14142 442 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 TBC1D10BQ4KMP7 808 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 AMOTQ4VCS5 1084 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 TTC39AQ5SRH9 613 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 NCAPH2Q6IBW4 605 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 TLDC1Q6P9B6 456 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 DDX46Q7L014 1031 aaKnown RBP4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 CD302Q8IX05 232 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms