RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 SNRNP35Q16560 246 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-205ENST00000450717 SCN4BQ8IWT1 228 aa13.97□□□□□ -0.17
SMARCA4-205ENST00000450717 C18orf8Q96DM3 657 aa13.97□□□□□ -0.17
SMARCA4-205ENST00000450717 PRKAG2Q9UGJ0 569 aa13.97□□□□□ -0.17
SMARCA4-205ENST00000450717 PRR12Q9ULL5 1215 aa13.97□□□□□ -0.17
SMARCA4-205ENST00000450717 FGFR4P22455 802 aa13.97□□□□□ -0.17
SMARCA4-205ENST00000450717 RFC5P40937 340 aa13.97□□□□□ -0.17
SMARCA4-205ENST00000450717 HP1BP3Q5SSJ5 553 aaPredicted RBP13.97□□□□□ -0.17
SMARCA4-205ENST00000450717 RNF149Q8NC42 400 aa13.97□□□□□ -0.17
SMARCA4-205ENST00000450717 EIF2AQ9BY44 585 aaKnown RBP13.97□□□□□ -0.17
SMARCA4-205ENST00000450717 ZNRF3Q9ULT6 936 aa13.97□□□□□ -0.17
SMARCA4-205ENST00000450717 NKX1-1Q15270 411 aaPredicted RBP13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 PARP9Q8IXQ6 854 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 TRIML2Q8N7C3 387 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 MS4A14Q96JA4 679 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 TEX13BQ9BXU2 312 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 IL25Q9H293 177 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 JMJD4Q9H9V9 463 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 SENP2Q9HC62 589 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 MLXIPLQ9NP71 852 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 SUCLA2Q9P2R7 463 aaPredicted RBP13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 DCTN4Q9UJW0 460 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 KITP10721 976 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 MTMR2Q13614 643 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 PIGHQ14442 188 aaPredicted RBP13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 VPS72Q15906 364 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 SGSM1Q2NKQ1 1148 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 C1orf228Q6PIY5 440 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 TRAPPC11Q7Z392 1133 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 LMCD1Q9NZU5 365 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 FHOD1Q9Y613 1164 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 NRXN1Q9ULB1 1477 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 MORF4L2Q15014 288 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 USP49Q70CQ1 688 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 MMGT1Q8N4V1 131 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 RBM46Q8TBY0 533 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 BTBD6Q96KE9 485 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 INPP5FQ9Y2H2 1132 aa13.96□□□□□ -0.17
SMARCA4-205ENST00000450717 GPR75-ASB3A0A0A6YYF3 556 aa13.96□□□□□ -0.18
SMARCA4-205ENST00000450717 CCDC195A0A1B0GUA6 201 aa13.96□□□□□ -0.18
SMARCA4-205ENST00000450717 LRRC14Q15048 493 aa13.96□□□□□ -0.18
SMARCA4-205ENST00000450717 XRRA1Q6P2D8 792 aa13.96□□□□□ -0.18
SMARCA4-205ENST00000450717 NOP9Q86U38 636 aaKnown RBP13.96□□□□□ -0.18
SMARCA4-205ENST00000450717 ZC3H18Q86VM9 953 aaKnown RBP13.96□□□□□ -0.18
SMARCA4-205ENST00000450717 ZNF677Q86XU0 584 aa13.96□□□□□ -0.18
SMARCA4-205ENST00000450717 POLR3CQ9BUI4 534 aaPredicted RBP13.96□□□□□ -0.18
SMARCA4-205ENST00000450717 KIFC3Q9BVG8 833 aa13.96□□□□□ -0.18
SMARCA4-205ENST00000450717 WWP1Q9H0M0 922 aa13.96□□□□□ -0.18
SMARCA4-205ENST00000450717 TRPV6Q9H1D0 765 aa13.96□□□□□ -0.18
SMARCA4-205ENST00000450717 VCPKMTQ9H867 229 aa13.96□□□□□ -0.18
SMARCA4-205ENST00000450717 ETNK1Q9HBU6 452 aa13.96□□□□□ -0.18
SMARCA4-205ENST00000450717 CNTNAP4Q9C0A0 1308 aa13.96□□□□□ -0.18
SMARCA4-205ENST00000450717 PFDN1O60925 122 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 SPATA21Q7Z572 469 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 TRABDQ9H4I3 376 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 SLC13A4Q9UKG4 626 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 ARL2BPQ9Y2Y0 163 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 SMAPO00193 183 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 MAFGO15525 162 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 RBP5P82980 135 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 GUCY1A3Q02108 690 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 SPATA31A1Q5TZJ5 1347 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 HMGCS2P54868 508 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 NME3Q13232 169 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 LINC00116Q8NCU8 138 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 ALKBH8Q96BT7 664 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 MXRA8Q9BRK3 442 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 FAM129AQ9BZQ8 928 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 SP110Q9HB58 689 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 TMEM8AQ9HCN3 771 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 MAD2L2Q9UI95 211 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 TAF6LQ9Y6J9 622 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 TYK2P29597 1187 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 CYP2C19P33261 490 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 POLE2P56282 527 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 PPP4CP60510 307 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 CDK17Q00537 523 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 NSUN2Q08J23 767 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 MAPRE2Q15555 327 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 MTHFD1LQ6UB35 978 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 OTUD5Q96G74 571 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 ITSN1Q15811 1721 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 H0Y3Z8 333 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 PSMD3O43242 534 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 CDH16O75309 829 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 MCF2P10911 925 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 NYAP1Q6ZVC0 841 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 FAM151AQ8WW52 585 aa13.95□□□□□ -0.18
SMARCA4-205ENST00000450717 ANKRD65E5RJM6 399 aa13.94□□□□□ -0.18
SMARCA4-205ENST00000450717 PIK3R2O00459 728 aa13.94□□□□□ -0.18
SMARCA4-205ENST00000450717 DIAPH2O60879 1101 aa13.94□□□□□ -0.18
SMARCA4-205ENST00000450717 NCOA4Q13772 614 aa13.94□□□□□ -0.18
SMARCA4-205ENST00000450717 EFTUD2Q15029 972 aaKnown RBP eCLIP13.94□□□□□ -0.182e-7■■■■□ 25.9
SMARCA4-205ENST00000450717 ICE2Q659A1 982 aa13.94□□□□□ -0.18
SMARCA4-205ENST00000450717 CCNYL1Q8N7R7 359 aa13.94□□□□□ -0.18
SMARCA4-205ENST00000450717 HIPK4Q8NE63 616 aa13.94□□□□□ -0.18
SMARCA4-205ENST00000450717 SMYD3Q9H7B4 428 aa13.94□□□□□ -0.18
SMARCA4-205ENST00000450717 ANLNQ9NQW6 1124 aa13.94□□□□□ -0.18
SMARCA4-205ENST00000450717 TMEM247A6NEH6 219 aa13.94□□□□□ -0.18
SMARCA4-205ENST00000450717 RECQLP46063 649 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms