RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 RBM15Q96T37 977 aaKnown RBP eCLIP11.03□□□□□ -0.645e-8■■■■□ 26.5
CTC1-202ENST00000449476 TMEM8AQ9HCN3 771 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 BAG5Q9UL15 447 aa11.03□□□□□ -0.64
CTC1-202ENST00000449476 SCAF8Q9UPN6 1271 aaKnown RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 APOBEC2Q9Y235 224 aaKnown RBP11.03□□□□□ -0.64
CTC1-202ENST00000449476 TYW5A2RUC4 315 aaKnown RBP11.02□□□□□ -0.64
CTC1-202ENST00000449476 SPECC1L-ADORA2AF8WAN1 911 aa11.02□□□□□ -0.64
CTC1-202ENST00000449476 P4HA2O15460 535 aa11.02□□□□□ -0.64
CTC1-202ENST00000449476 LPXNO60711 386 aa11.02□□□□□ -0.64
CTC1-202ENST00000449476 SMIM24O75264 130 aa11.02□□□□□ -0.64
CTC1-202ENST00000449476 ARFIP2P53365 341 aa11.02□□□□□ -0.64
CTC1-202ENST00000449476 WDR93Q6P2C0 686 aa11.02□□□□□ -0.64
CTC1-202ENST00000449476 C1orf228Q6PIY5 440 aa11.02□□□□□ -0.64
CTC1-202ENST00000449476 TRIM65Q6PJ69 517 aa11.02□□□□□ -0.64
CTC1-202ENST00000449476 TRMT10CQ7L0Y3 403 aaKnown RBP11.02□□□□□ -0.64
CTC1-202ENST00000449476 ZNF280CQ8ND82 737 aa11.02□□□□□ -0.64
CTC1-202ENST00000449476 HIPK4Q8NE63 616 aa11.02□□□□□ -0.64
CTC1-202ENST00000449476 ZNF473Q8WTR7 871 aaKnown RBP11.02□□□□□ -0.64
CTC1-202ENST00000449476 CYTH2Q99418 400 aa11.02□□□□□ -0.64
CTC1-202ENST00000449476 MMP19Q99542 508 aa11.02□□□□□ -0.64
CTC1-202ENST00000449476 CHORDC1Q9UHD1 332 aaPredicted RBP11.02□□□□□ -0.64
CTC1-202ENST00000449476 CNOT7Q9UIV1 285 aaKnown RBP11.02□□□□□ -0.64
CTC1-202ENST00000449476 ANGPTL2Q9UKU9 493 aa11.02□□□□□ -0.64
CTC1-202ENST00000449476 TPX2Q9ULW0 747 aaKnown RBP11.02□□□□□ -0.64
CTC1-202ENST00000449476 ANGPTL3Q9Y5C1 460 aa11.02□□□□□ -0.64
CTC1-202ENST00000449476 TCP11X1B4DZS4 312 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 HLA-DRAP01903 254 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 TXNP10599 105 aaKnown RBP11.02□□□□□ -0.65
CTC1-202ENST00000449476 LSP1P33241 339 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 EIF3EP60228 445 aaKnown RBP11.02□□□□□ -0.65
CTC1-202ENST00000449476 PRKCEQ02156 737 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 ACTN3Q08043 901 aaPredicted RBP11.02□□□□□ -0.65
CTC1-202ENST00000449476 RCOR2Q8IZ40 523 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 SEPT1Q8WYJ6 367 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 SENP7Q9BQF6 1050 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 SLC13A1Q9BZW2 595 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 CARD9Q9H257 536 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 SCOCQ9UIL1 159 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 L1RE1Q9UN81 338 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 F5H423 210 aaPredicted RBP11.02□□□□□ -0.65
CTC1-202ENST00000449476 FOXP2O15409 715 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 MYL3P08590 195 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 PON1P27169 355 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 SH3BGRP55822 239 aaPredicted RBP11.02□□□□□ -0.65
CTC1-202ENST00000449476 KIAA1841Q6NSI8 718 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 ANKMY2Q8IV38 441 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 TPCN2Q8NHX9 752 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 ACER1Q8TDN7 264 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 SDCCAG3Q96C92 435 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 GRAMD1AQ96CP6 724 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 EFHD1Q9BUP0 239 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 ADAM33Q9BZ11 813 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 OSBPL8Q9BZF1 889 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 RIOX1Q9H6W3 641 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 PSD3Q9NYI0 1048 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 SENP1Q9P0U3 644 aa11.02□□□□□ -0.65
CTC1-202ENST00000449476 POLRMTO00411 1230 aaKnown RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 S100BP04271 92 aaPredicted RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 CHN1P15882 459 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 ADORA2BP29275 332 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 CASP4P49662 377 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 RPS6P62753 249 aaKnown RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 EMC2Q15006 297 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 LONRF1Q17RB8 773 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 P3H1Q32P28 736 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 EPC2Q52LR7 807 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 PAPD7Q5XG87 772 aaKnown RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 MOXD1Q6UVY6 613 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 MOV10L1Q9BXT6 1211 aaKnown RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 ARHGAP20Q9P2F6 1191 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 DBR1Q9UK59 544 aaKnown RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 ZWINTO95229 277 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 KITP10721 976 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 PMLP29590 882 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 PMS1P54277 932 aaKnown RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 HERVK_113P62684 666 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 COG7P83436 770 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 CDK17Q00537 523 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 NT5DC1Q5TFE4 455 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 C3orf67Q6ZVT6 689 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 SERPINI1Q99574 410 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 PRMT1Q99873 361 aaKnown RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 PI4K2AQ9BTU6 479 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 BEGAINQ9BUH8 593 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 TRABDQ9H4I3 376 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 IL17RBQ9NRM6 502 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 BFARQ9NZS9 450 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 LRFN2Q9ULH4 789 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 PHF20L1A8MW92 1017 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 C19orf81C9J6K1 198 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 MAFGO15525 162 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 MDM2Q00987 491 aaPredicted RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 KLC3Q6P597 504 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 NUDCD3Q8IVD9 361 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 CDKL3Q8IVW4 592 aaPredicted RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 DHX38Q92620 1227 aaKnown RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 GCOM2Q9BZD3 368 aaPredicted RBP11.01□□□□□ -0.65
CTC1-202ENST00000449476 THAP2Q9H0W7 228 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 ANKEF1Q9NU02 776 aa11.01□□□□□ -0.65
CTC1-202ENST00000449476 AGAP1Q9UPQ3 857 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms