RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 SMG8Q8ND04 991 aaKnown RBP15.87■□□□□ 0.13
TNF-208ENST00000449264 TMC2Q8TDI7 906 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 SEPT8Q92599 483 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 PARP2Q9UGN5 583 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 PDCD11Q14690 1871 aaKnown RBP15.87■□□□□ 0.13
TNF-208ENST00000449264 MICAL3Q7RTP6 2002 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 PTPRJQ12913 1337 aa15.87■□□□□ 0.13
TNF-208ENST00000449264 KIAA0355O15063 1070 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 PARNO95453 639 aaKnown RBP15.86■□□□□ 0.13
TNF-208ENST00000449264 PPP3CAQ08209 521 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 HACE1Q8IYU2 909 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 LINC01599Q8WXQ3 324 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 MRFAP1L1Q96HT8 127 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 CGRRF1Q99675 332 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 FTHL17Q9BXU8 183 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 RNF39Q9H2S5 420 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 PRKAG2Q9UGJ0 569 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 LACTBL1A8MY62 500 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 MEFVO15553 781 aaPredicted RBP15.86■□□□□ 0.13
TNF-208ENST00000449264 IL18RAPO95256 599 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 CXCL10P02778 98 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 FMO5P49326 533 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 MXI1P50539 228 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 RAB27AP51159 221 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 MYL7Q01449 175 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 SLC10A6Q3KNW5 377 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 CBWD6Q4V339 395 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 CBWD3Q5JTY5 395 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 CBWD5Q5RIA9 395 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 DRC7Q8IY82 874 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 APBB2Q92870 758 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 LPPQ93052 612 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 SNX27Q96L92 541 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 CRACR2AQ9BSW2 395 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 KLK14Q9P0G3 267 aa15.86■□□□□ 0.13
TNF-208ENST00000449264 MEIS3P2A8K0S8 358 aa15.85■□□□□ 0.13
TNF-208ENST00000449264 STX10O60499 249 aa15.85■□□□□ 0.13
TNF-208ENST00000449264 NFICP08651 508 aa15.85■□□□□ 0.13
TNF-208ENST00000449264 ITGA4P13612 1032 aa15.85■□□□□ 0.13
TNF-208ENST00000449264 TFAMQ00059 246 aaKnown RBP15.85■□□□□ 0.13
TNF-208ENST00000449264 SURF1Q15526 300 aa15.85■□□□□ 0.13
TNF-208ENST00000449264 TCTN1Q2MV58 587 aa15.85■□□□□ 0.13
TNF-208ENST00000449264 EFCAB13Q8IY85 973 aa15.85■□□□□ 0.13
TNF-208ENST00000449264 PCMTD1Q96MG8 357 aaPredicted RBP15.85■□□□□ 0.13
TNF-208ENST00000449264 RGS18Q9NS28 235 aa15.85■□□□□ 0.13
TNF-208ENST00000449264 RNF19AQ9NV58 838 aa15.85■□□□□ 0.13
TNF-208ENST00000449264 A0A0U1RQF3 1178 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 TTC26A0AVF1 554 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 CSF2RAP15509 400 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 RFC2P35250 354 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 KLK7P49862 253 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 BIRC3Q13489 604 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 SYCP1Q15431 976 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 GLRA4Q5JXX5 417 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 JADE1Q6IE81 842 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 TMC6Q7Z403 805 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 RTN4RL1Q86UN2 441 aaPredicted RBP15.84■□□□□ 0.13
TNF-208ENST00000449264 WDR49Q8IV35 697 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 TNS4Q8IZW8 715 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 SPC24Q8NBT2 197 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 OR5B17Q8NGF7 314 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 HTATIP2Q9BUP3 242 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 TRAIPQ9BWF2 469 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 MTMR12Q9C0I1 747 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 TMEM117Q9H0C3 514 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 CXCL16Q9H2A7 254 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 TSPYL2Q9H2G4 693 aaPredicted RBP15.84■□□□□ 0.13
TNF-208ENST00000449264 TMEM8AQ9HCN3 771 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 GCNT4Q9P109 453 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 LTBP2Q14767 1821 aa15.84■□□□□ 0.13
TNF-208ENST00000449264 N4BP1O75113 896 aaKnown RBP15.83■□□□□ 0.13
TNF-208ENST00000449264 CLSTN1O94985 981 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 TMEM191BP0C7N4 346 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 SKIP12755 728 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 ATF7P17544 494 aaPredicted RBP15.83■□□□□ 0.13
TNF-208ENST00000449264 MLH1P40692 756 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 ENPEPQ07075 957 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 TMEM132DQ14C87 1099 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 KRT39Q6A163 491 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 MFSD5Q6N075 450 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 SLC24A5Q71RS6 500 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 ECHDC2Q86YB7 292 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 VSTM4Q8IW00 320 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 TMEM199Q8N511 208 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 ZNF516Q92618 1163 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 KIF12Q96FN5 646 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 ASB7Q9H672 318 aa15.83■□□□□ 0.13
TNF-208ENST00000449264 TDRD15B5MCY1 1934 aaKnown RBP15.83■□□□□ 0.12
TNF-208ENST00000449264 C9IYK1 514 aa15.83■□□□□ 0.12
TNF-208ENST00000449264 EVI5O60447 810 aa15.83■□□□□ 0.12
TNF-208ENST00000449264 CDC25BP30305 580 aa15.83■□□□□ 0.12
TNF-208ENST00000449264 CLDN10P78369 228 aa15.83■□□□□ 0.12
TNF-208ENST00000449264 POU5F1Q01860 360 aaKnown RBP15.83■□□□□ 0.12
TNF-208ENST00000449264 TDRD10Q5VZ19 366 aaKnown RBP15.83■□□□□ 0.12
TNF-208ENST00000449264 CNKSR3Q6P9H4 555 aa15.83■□□□□ 0.12
TNF-208ENST00000449264 SV2AQ7L0J3 742 aa15.83■□□□□ 0.12
TNF-208ENST00000449264 PGBD4Q96DM1 585 aa15.83■□□□□ 0.12
TNF-208ENST00000449264 ANKRD36BP1Q96IX9 119 aa15.83■□□□□ 0.12
TNF-208ENST00000449264 ZFP42Q96MM3 310 aa15.83■□□□□ 0.12
TNF-208ENST00000449264 PLEKHA5Q9HAU0 1116 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms