RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 MAGEB2O15479 319 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 CYP26A1O43174 497 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 SGPL1O95470 568 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 VNN1O95497 513 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 HLA-DRAP01903 254 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 TMEM253P0C7T8 217 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 TNFSF9P41273 254 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 MBTD1Q05BQ5 628 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 POU5F1BQ06416 359 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 TAF1CQ15572 869 aaPredicted RBP19.09■□□□□ 0.65
LMNA-208ENST00000448611 MEI1Q5TIA1 1274 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 ENOSF1Q7L5Y1 443 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 ZBTB33Q86T24 672 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 NOP9Q86U38 636 aaKnown RBP19.09■□□□□ 0.65
LMNA-208ENST00000448611 NOA1Q8NC60 698 aaKnown RBP19.09■□□□□ 0.65
LMNA-208ENST00000448611 ZNF668Q96K58 619 aaPredicted RBP19.09■□□□□ 0.65
LMNA-208ENST00000448611 TCHPQ9BT92 498 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 ANKZF1Q9H8Y5 726 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 PTPRHQ9HD43 1115 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 TAS2R14Q9NYV8 317 aa19.09■□□□□ 0.65
LMNA-208ENST00000448611 NCANO14594 1321 aa19.08■□□□□ 0.65
LMNA-208ENST00000448611 H3BRB1 525 aa19.08■□□□□ 0.65
LMNA-208ENST00000448611 FTCDO95954 541 aa19.08■□□□□ 0.65
LMNA-208ENST00000448611 MAP2K5Q13163 448 aa19.08■□□□□ 0.65
LMNA-208ENST00000448611 NOGQ13253 232 aa19.08■□□□□ 0.65
LMNA-208ENST00000448611 IFI16Q16666 785 aaKnown RBP19.08■□□□□ 0.65
LMNA-208ENST00000448611 LRRC57Q8N9N7 239 aa19.08■□□□□ 0.65
LMNA-208ENST00000448611 OR6J1Q8NGC5 347 aa19.08■□□□□ 0.65
LMNA-208ENST00000448611 RPGRIP1Q96KN7 1286 aa19.08■□□□□ 0.65
LMNA-208ENST00000448611 FAM81BQ96LP2 452 aa19.08■□□□□ 0.65
LMNA-208ENST00000448611 ZIC5Q96T25 663 aa19.08■□□□□ 0.65
LMNA-208ENST00000448611 PARD6BQ9BYG5 372 aa19.08■□□□□ 0.65
LMNA-208ENST00000448611 TUT1Q9H6E5 874 aaKnown RBP19.08■□□□□ 0.65
LMNA-208ENST00000448611 MINDY3Q9H8M7 445 aa19.08■□□□□ 0.65
LMNA-208ENST00000448611 C1orf112Q9NSG2 853 aa19.08■□□□□ 0.65
LMNA-208ENST00000448611 TMCO5BA8MYB1 307 aa19.08■□□□□ 0.64
LMNA-208ENST00000448611 INO80B-WBP1J3KQ70 363 aa19.08■□□□□ 0.64
LMNA-208ENST00000448611 OGTO15294 1046 aa19.08■□□□□ 0.64
LMNA-208ENST00000448611 B4GALT5O43286 388 aa19.08■□□□□ 0.64
LMNA-208ENST00000448611 CHRNB2P17787 502 aa19.08■□□□□ 0.64
LMNA-208ENST00000448611 CLCN6P51797 869 aa19.08■□□□□ 0.64
LMNA-208ENST00000448611 ZNF572Q7Z3I7 529 aaPredicted RBP19.08■□□□□ 0.64
LMNA-208ENST00000448611 SLC47A2Q86VL8 602 aa19.08■□□□□ 0.64
LMNA-208ENST00000448611 RPUSD2Q8IZ73 545 aaKnown RBP19.08■□□□□ 0.64
LMNA-208ENST00000448611 MSANTD4Q8NCY6 345 aa19.08■□□□□ 0.64
LMNA-208ENST00000448611 OR5B17Q8NGF7 314 aa19.08■□□□□ 0.64
LMNA-208ENST00000448611 TPCN2Q8NHX9 752 aa19.08■□□□□ 0.64
LMNA-208ENST00000448611 DHX38Q92620 1227 aaKnown RBP19.08■□□□□ 0.64
LMNA-208ENST00000448611 INO80BQ9C086 356 aaPredicted RBP19.08■□□□□ 0.64
LMNA-208ENST00000448611 PDCL3Q9H2J4 239 aa19.08■□□□□ 0.64
LMNA-208ENST00000448611 IFT122Q9HBG6 1241 aa19.08■□□□□ 0.64
LMNA-208ENST00000448611 ACP6Q9NPH0 428 aa19.08■□□□□ 0.64
LMNA-208ENST00000448611 SEPT11Q9NVA2 429 aaKnown RBP19.08■□□□□ 0.64
LMNA-208ENST00000448611 CPSF3Q9UKF6 684 aaKnown RBP19.08■□□□□ 0.64
LMNA-208ENST00000448611 RRP9O43818 475 aaKnown RBP19.07■□□□□ 0.64
LMNA-208ENST00000448611 AOC2O75106 756 aa19.07■□□□□ 0.64
LMNA-208ENST00000448611 HOXC6P09630 235 aa19.07■□□□□ 0.64
LMNA-208ENST00000448611 IQCF3P0C7M6 154 aa19.07■□□□□ 0.64
LMNA-208ENST00000448611 PIK3CAP42336 1068 aa19.07■□□□□ 0.64
LMNA-208ENST00000448611 NOP2P46087 812 aaKnown RBP19.07■□□□□ 0.64
LMNA-208ENST00000448611 BIRC3Q13489 604 aa19.07■□□□□ 0.64
LMNA-208ENST00000448611 IRF5Q13568 498 aa19.07■□□□□ 0.64
LMNA-208ENST00000448611 WDR44Q5JSH3 913 aa19.07■□□□□ 0.64
LMNA-208ENST00000448611 ATF7IP2Q5U623 682 aa19.07■□□□□ 0.64
LMNA-208ENST00000448611 MTHFD1LQ6UB35 978 aa19.07■□□□□ 0.64
LMNA-208ENST00000448611 MPZL3Q6UWV2 235 aa19.07■□□□□ 0.64
LMNA-208ENST00000448611 C17orf99Q6UX52 265 aa19.07■□□□□ 0.64
LMNA-208ENST00000448611 IFNL1Q8IU54 200 aa19.07■□□□□ 0.64
LMNA-208ENST00000448611 IFNLR1Q8IU57 520 aaPredicted RBP19.07■□□□□ 0.64
LMNA-208ENST00000448611 PCDHB18PQ96TA0 734 aa19.07■□□□□ 0.64
LMNA-208ENST00000448611 ISCUQ9H1K1 167 aa19.07■□□□□ 0.64
LMNA-208ENST00000448611 CYP11B1P15538 503 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 HSPA6P17066 643 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 CXCR5P32302 372 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 INHBEP58166 350 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 TNFAIP2Q03169 654 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 SREBF2Q12772 1141 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 DGKDQ16760 1214 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 CAGE1Q8TC20 777 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 USP6NLQ92738 828 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 PSMB7Q99436 277 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 ARGLU1Q9NWB6 273 aaPredicted RBP19.06■□□□□ 0.64
LMNA-208ENST00000448611 FLRT1Q9NZU1 646 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 ANKRD62A6NC57 917 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 ECM2O94769 699 aaPredicted RBP19.06■□□□□ 0.64
LMNA-208ENST00000448611 SLFN11Q7Z7L1 901 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 WDR49Q8IV35 697 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 CTNNBL1Q8WYA6 563 aaPredicted RBP19.06■□□□□ 0.64
LMNA-208ENST00000448611 RFFLQ8WZ73 363 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 ARID3AQ99856 593 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 THAP2Q9H0W7 228 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 PRMT7Q9NVM4 692 aaPredicted RBP19.06■□□□□ 0.64
LMNA-208ENST00000448611 GNEQ9Y223 722 aaKnown RBP19.06■□□□□ 0.64
LMNA-208ENST00000448611 TNFSF13BQ9Y275 285 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 ZSWIM8A7E2V4 1837 aa19.06■□□□□ 0.64
LMNA-208ENST00000448611 EVPLQ92817 2033 aa19.05■□□□□ 0.64
LMNA-208ENST00000448611 ABCB4P21439 1286 aa19.05■□□□□ 0.64
LMNA-208ENST00000448611 PHKA2P46019 1235 aa19.05■□□□□ 0.64
LMNA-208ENST00000448611 VEGFBP49765 207 aa19.05■□□□□ 0.64
LMNA-208ENST00000448611 AP3M2P53677 418 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms