RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 CNGA1P29973 690 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 SPP2Q13103 211 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 DGKZQ13574 1117 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 ZKSCAN8Q15776 578 aaPredicted RBP13.8□□□□□ -0.2
SHC1-210ENST00000448116 KYNUQ16719 465 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 TAOK1Q7L7X3 1001 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 TBC1D1Q86TI0 1168 aaPredicted RBP13.8□□□□□ -0.2
SHC1-210ENST00000448116 FAM160B2Q86V87 743 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 CEP120Q8N960 986 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 CENPTQ96BT3 561 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 BICD1Q96G01 975 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 ZNF341Q9BYN7 854 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 STMN4Q9H169 189 aaPredicted RBP13.8□□□□□ -0.2
SHC1-210ENST00000448116 ZNF70Q9UC06 446 aaPredicted RBP13.8□□□□□ -0.2
SHC1-210ENST00000448116 SUFUQ9UMX1 484 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 USP20Q9Y2K6 914 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 CTDP1Q9Y5B0 961 aaPredicted RBP13.8□□□□□ -0.2
SHC1-210ENST00000448116 LY75O60449 1722 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 TTC36A6NLP5 189 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 GGPS1O95749 300 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 CHKAP35790 457 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 ADCY8P40145 1251 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 B3GNT9Q6UX72 402 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 OGFOD1Q8N543 542 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 KIFAP3Q92845 792 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 VTI1AQ96AJ9 217 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 CNOT7Q9UIV1 285 aaKnown RBP13.8□□□□□ -0.2
SHC1-210ENST00000448116 GTF3C4Q9UKN8 822 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 USTQ9Y2C2 406 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 DHX15O43143 795 aaKnown RBP13.8□□□□□ -0.2
SHC1-210ENST00000448116 C21orf2O43822 256 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 ATP9AO75110 1047 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 ADSSP30520 456 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 GBP1P32455 592 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 CDR2Q01850 454 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 EXOC3L1Q86VI1 746 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 SHC3Q92529 594 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 ART4Q93070 314 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 TBC1D31Q96DN5 1066 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 TAAR1Q96RJ0 339 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 PLVAPQ9BX97 442 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 AGO4Q9HCK5 861 aaKnown RBP13.8□□□□□ -0.2
SHC1-210ENST00000448116 FEM1BQ9UK73 627 aa13.8□□□□□ -0.2
SHC1-210ENST00000448116 TPX2Q9ULW0 747 aaKnown RBP13.8□□□□□ -0.2
SHC1-210ENST00000448116 ATRNL1Q5VV63 1379 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 GSTTP1A0A1W2PQM5 241 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 ALCAMQ13740 583 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 FBXL13Q8NEE6 735 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 PARD3BQ8TEW8 1205 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 CD101Q93033 1021 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 RUNDC3BQ96NL0 473 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 HOMER3Q9NSC5 361 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 FGFR1OP2Q9NVK5 253 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 RAB20Q9NX57 234 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 TCP11X1B4DZS4 312 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 SCP2P22307 547 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 MRPS9P82933 396 aaKnown RBP13.79□□□□□ -0.2
SHC1-210ENST00000448116 GTF2BQ00403 316 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 CCDC63Q8NA47 563 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 NSRP1Q9H0G5 558 aaKnown RBP13.79□□□□□ -0.2
SHC1-210ENST00000448116 KDM4CQ9H3R0 1056 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 KMT5AQ9NQR1 393 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 TBX20Q9UMR3 447 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 UBR3Q6ZT12 1888 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 LTBP4Q8N2S1 1624 aa13.79□□□□□ -0.2
SHC1-210ENST00000448116 TMEM120BA0PK00 339 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 THAP12O43422 761 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 CYP1A2P05177 515 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 CAP2P40123 477 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 FKBP1AP62942 108 aaKnown RBP13.78□□□□□ -0.2
SHC1-210ENST00000448116 CNGA2Q16280 664 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 NUGGCQ68CJ6 796 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 SEPT14Q6ZU15 432 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 SV2AQ7L0J3 742 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 HELQQ8TDG4 1101 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 FAM151AQ8WW52 585 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 ABCF3Q9NUQ8 709 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 EXOC7Q9UPT5 735 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 NPTX2P47972 431 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 ITGA8P53708 1063 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 SIX1Q15475 284 aaPredicted RBP13.78□□□□□ -0.2
SHC1-210ENST00000448116 ACAD10Q6JQN1 1059 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 CROCCP2Q86T23 111 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 PRUNE1Q86TP1 453 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 PASD1Q8IV76 773 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 MORC4Q8TE76 937 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 IWS1Q96ST2 819 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 PAIP2Q9BPZ3 127 aaKnown RBP13.78□□□□□ -0.2
SHC1-210ENST00000448116 FAM213AQ9BRX8 229 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 UVRAGQ9P2Y5 699 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 SIPA1L1O43166 1804 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 HNRNPDLO14979 420 aaKnown RBP13.78□□□□□ -0.2
SHC1-210ENST00000448116 APBA3O96018 575 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 RRM1P23921 792 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 DMP1Q13316 513 aaPredicted RBP13.78□□□□□ -0.2
SHC1-210ENST00000448116 CYFIP1Q7L576 1253 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 GIMAP7Q8NHV1 300 aa13.78□□□□□ -0.2
SHC1-210ENST00000448116 ANAPC5Q9UJX4 755 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms