RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 KBTBD4Q9NVX7 518 aa27.32■■□□□ 1.96
UFD1-204ENST00000447868 CITO14578 2027 aa27.31■■□□□ 1.96
UFD1-204ENST00000447868 GLP2RO95838 553 aa27.31■■□□□ 1.96
UFD1-204ENST00000447868 PIGRP01833 764 aa27.31■■□□□ 1.96
UFD1-204ENST00000447868 HSP90AA2PQ14568 343 aaPredicted RBP27.31■■□□□ 1.96
UFD1-204ENST00000447868 TPRNQ4KMQ1 711 aa27.31■■□□□ 1.96
UFD1-204ENST00000447868 LLGL2Q6P1M3 1020 aa27.31■■□□□ 1.96
UFD1-204ENST00000447868 TAS1R1Q7RTX1 841 aa27.31■■□□□ 1.96
UFD1-204ENST00000447868 TMEM87AQ8NBN3 555 aa27.31■■□□□ 1.96
UFD1-204ENST00000447868 VN1R2Q8NFZ6 395 aa27.31■■□□□ 1.96
UFD1-204ENST00000447868 ADAMTS19Q8TE59 1207 aa27.31■■□□□ 1.96
UFD1-204ENST00000447868 SNX27Q96L92 541 aa27.31■■□□□ 1.96
UFD1-204ENST00000447868 PPP1R10Q96QC0 940 aaKnown RBP27.31■■□□□ 1.96
UFD1-204ENST00000447868 STK39Q9UEW8 545 aa27.31■■□□□ 1.96
UFD1-204ENST00000447868 KCNH3Q9ULD8 1083 aa27.31■■□□□ 1.96
UFD1-204ENST00000447868 BARX2Q9UMQ3 279 aaPredicted RBP27.31■■□□□ 1.96
UFD1-204ENST00000447868 VCANP13611 3396 aa27.31■■□□□ 1.96
UFD1-204ENST00000447868 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.3■■□□□ 1.96
UFD1-204ENST00000447868 SMIM28A0A1B0GU29 152 aa27.3■■□□□ 1.96
UFD1-204ENST00000447868 FRMD3A2A2Y4 597 aa27.3■■□□□ 1.96
UFD1-204ENST00000447868 AMPD3Q01432 767 aa27.3■■□□□ 1.96
UFD1-204ENST00000447868 PTCRAQ6ISU1 281 aaPredicted RBP27.3■■□□□ 1.96
UFD1-204ENST00000447868 ALKAL1Q6UXT8 129 aa27.3■■□□□ 1.96
UFD1-204ENST00000447868 CCDC65Q8IXS2 484 aa27.3■■□□□ 1.96
UFD1-204ENST00000447868 HASPINQ8TF76 798 aa27.3■■□□□ 1.96
UFD1-204ENST00000447868 HERC2P3Q9BVR0 1158 aa27.3■■□□□ 1.96
UFD1-204ENST00000447868 ANKRD63C9JTQ0 380 aa27.29■■□□□ 1.96
UFD1-204ENST00000447868 C2CD2LO14523 706 aa27.29■■□□□ 1.96
UFD1-204ENST00000447868 MEFVO15553 781 aaPredicted RBP27.29■■□□□ 1.96
UFD1-204ENST00000447868 TADA2AO75478 443 aa27.29■■□□□ 1.96
UFD1-204ENST00000447868 GCNT3O95395 438 aa27.29■■□□□ 1.96
UFD1-204ENST00000447868 SOD2P04179 222 aa27.29■■□□□ 1.96
UFD1-204ENST00000447868 ASIC1P78348 528 aa27.29■■□□□ 1.96
UFD1-204ENST00000447868 PTPN14Q15678 1187 aa27.29■■□□□ 1.96
UFD1-204ENST00000447868 SLC39A4Q6P5W5 647 aa27.29■■□□□ 1.96
UFD1-204ENST00000447868 TRIM9Q9C026 710 aa27.29■■□□□ 1.96
UFD1-204ENST00000447868 SCAND2PQ9GZW5 306 aaPredicted RBP27.29■■□□□ 1.96
UFD1-204ENST00000447868 IKZF4Q9H2S9 585 aa27.29■■□□□ 1.96
UFD1-204ENST00000447868 CLEC1BQ9P126 229 aa27.29■■□□□ 1.96
UFD1-204ENST00000447868 ADAM28Q9UKQ2 775 aa27.29■■□□□ 1.96
UFD1-204ENST00000447868 FSD2A1L4K1 749 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 TISP43B9A030 160 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 CLASP2O75122 1294 aaKnown RBP27.28■■□□□ 1.96
UFD1-204ENST00000447868 PPP1R37O75864 691 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 KIF4AO95239 1232 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 URODP06132 367 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 MYBP10242 640 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 CASP5P51878 434 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 NUCB2P80303 420 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 COASYQ13057 564 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 XKR4Q5GH76 650 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 ADALQ6DHV7 355 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 FUT10Q6P4F1 479 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 HVCN1Q96D96 273 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 B3GALT6Q96L58 329 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 ZMAT2Q96NC0 199 aaKnown RBP27.28■■□□□ 1.96
UFD1-204ENST00000447868 NECAB3Q96P71 396 aaPredicted RBP27.28■■□□□ 1.96
UFD1-204ENST00000447868 MSTO1Q9BUK6 570 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 FGFBP2Q9BYJ0 223 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 GPR62Q9BZJ7 368 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 MAGEF1Q9HAY2 307 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 GOLGA2P5Q9HBQ8 144 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 GDPD2Q9HCC8 539 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 OLFML3Q9NRN5 406 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 MRPL17Q9NRX2 175 aaKnown RBP27.28■■□□□ 1.96
UFD1-204ENST00000447868 CD207Q9UJ71 328 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 IRAK3Q9Y616 596 aa27.28■■□□□ 1.96
UFD1-204ENST00000447868 A0A1B0GVL5 298 aa27.27■■□□□ 1.96
UFD1-204ENST00000447868 CLTAP09496 248 aa27.27■■□□□ 1.96
UFD1-204ENST00000447868 CXCL8P10145 99 aa27.27■■□□□ 1.96
UFD1-204ENST00000447868 PFKFB1P16118 471 aa27.27■■□□□ 1.96
UFD1-204ENST00000447868 CMA1P23946 247 aa27.27■■□□□ 1.96
UFD1-204ENST00000447868 TNFSF9P41273 254 aa27.27■■□□□ 1.96
UFD1-204ENST00000447868 KCNA1Q09470 495 aa27.27■■□□□ 1.96
UFD1-204ENST00000447868 SLC10A6Q3KNW5 377 aa27.27■■□□□ 1.96
UFD1-204ENST00000447868 ZBTB41Q5SVQ8 909 aa27.27■■□□□ 1.96
UFD1-204ENST00000447868 RNF168Q8IYW5 571 aaPredicted RBP27.27■■□□□ 1.96
UFD1-204ENST00000447868 PYM1Q9BRP8 204 aaKnown RBP27.27■■□□□ 1.96
UFD1-204ENST00000447868 STRA6Q9BX79 667 aa27.27■■□□□ 1.96
UFD1-204ENST00000447868 BLZF1Q9H2G9 400 aa27.27■■□□□ 1.96
UFD1-204ENST00000447868 CNTN3Q9P232 1028 aa27.27■■□□□ 1.96
UFD1-204ENST00000447868 SERTAD1Q9UHV2 236 aa27.27■■□□□ 1.96
UFD1-204ENST00000447868 A0A0B4J269 797 aa27.26■■□□□ 1.95
UFD1-204ENST00000447868 OGTO15294 1046 aa27.26■■□□□ 1.95
UFD1-204ENST00000447868 EFEMP2O95967 443 aa27.26■■□□□ 1.95
UFD1-204ENST00000447868 SRGAP2BP0DMP2 458 aa27.26■■□□□ 1.95
UFD1-204ENST00000447868 IL9P15248 144 aa27.26■■□□□ 1.95
UFD1-204ENST00000447868 CASP1P29466 404 aa27.26■■□□□ 1.95
UFD1-204ENST00000447868 AFMP43652 599 aa27.26■■□□□ 1.95
UFD1-204ENST00000447868 GLUD2P49448 558 aa27.26■■□□□ 1.95
UFD1-204ENST00000447868 SOX4Q06945 474 aaPredicted RBP27.26■■□□□ 1.95
UFD1-204ENST00000447868 PUS10Q3MIT2 529 aaKnown RBP27.26■■□□□ 1.95
UFD1-204ENST00000447868 L1TD1Q5T7N2 865 aaKnown RBP27.26■■□□□ 1.95
UFD1-204ENST00000447868 KIAA1841Q6NSI8 718 aa27.26■■□□□ 1.95
UFD1-204ENST00000447868 CEP57L1Q8IYX8 460 aa27.26■■□□□ 1.95
UFD1-204ENST00000447868 HPS3Q969F9 1004 aa27.26■■□□□ 1.95
UFD1-204ENST00000447868 ACCSQ96QU6 501 aa27.26■■□□□ 1.95
UFD1-204ENST00000447868 UHRF1Q96T88 793 aaPredicted RBP27.26■■□□□ 1.95
UFD1-204ENST00000447868 C7orf25Q9BPX7 421 aa27.26■■□□□ 1.95
UFD1-204ENST00000447868 SLC38A7Q9NVC3 462 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms