RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 LIN52Q52LA3 116 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 PPP6R3Q5H9R7 873 aaPredicted RBP9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 KDM7AQ6ZMT4 941 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 ZNF677Q86XU0 584 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 MMAAQ8IVH4 418 aaKnown RBP9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 CDH26Q8IXH8 852 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 IFNL2Q8IZJ0 200 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 DTX3Q8N9I9 347 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 TTLL11Q8NHH1 800 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 PHOSPHO2Q8TCD6 241 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 RIN2Q8WYP3 895 aaPredicted RBP9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 RRP36Q96EU6 259 aaKnown RBP9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 HS6ST2Q96MM7 605 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 CMTM3Q96MX0 182 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 NOX5Q96PH1 765 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 NCOR1P1Q9H4R4 102 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 WDR6Q9NNW5 1121 aaKnown RBP9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 AMACRQ9UHK6 382 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 PCOLCE2Q9UKZ9 415 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 DUSP12Q9UNI6 340 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 LRCH1Q9Y2L9 728 aa9.19□□□□□ -0.94
MCF2L2-203ENST00000447025 PDS5AQ29RF7 1337 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 SH3PXD2BA1X283 911 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 IKBKBO14920 756 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 TSC22D2O75157 780 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 DLATP10515 647 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 SELLP14151 372 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 CTNNA1P35221 906 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 ATP6V1E1P36543 226 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 ADCY7P51828 1080 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 CTDSPL2Q05D32 466 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 CDC20Q12834 499 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 R3HDM1Q15032 1099 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 CFAP221Q4G0U5 840 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 FYB2Q5VWT5 728 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 SMYD5Q6GMV2 418 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 PDE12Q6L8Q7 609 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 KIAA1841Q6NSI8 718 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 GGT6Q6P531 493 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 IDO2Q6ZQW0 420 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 KCTD20Q7Z5Y7 419 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 CPLX4Q7Z7G2 160 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 CCNJLQ8IV13 435 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 ANKRD44Q8N8A2 993 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 MLKLQ8NB16 471 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 PDZD8Q8NEN9 1154 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 GTF3C2Q8WUA4 911 aaPredicted RBP9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 NAT14Q8WUY8 206 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 RAPGEF5Q92565 580 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 USB1Q9BQ65 265 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 BTBD2Q9BX70 525 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 NUSAP1Q9BXS6 441 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 SLITRK6Q9H5Y7 841 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 SP140LQ9H930 580 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 ZNF287Q9HBT7 754 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 MRPL40Q9NQ50 206 aaKnown RBP9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 SELENONQ9NZV5 590 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 TNFRSF10DQ9UBN6 386 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 SLC12A4Q9UP95 1085 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 MAPRE3Q9UPY8 281 aa9.18□□□□□ -0.94
MCF2L2-203ENST00000447025 CAPN14A8MX76 684 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 IFNA14P01570 189 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 CAPNS1P04632 268 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 HEXBP07686 556 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 CPA1P15085 419 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 TCEA1P23193 301 aaKnown RBP9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 DNAJB2P25686 324 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 ITGA9Q13797 1035 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 NFIL3Q16649 462 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 MAJINQ3KP22 176 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 GRTP1Q5TC63 336 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 AADACL4Q5VUY2 407 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 AGMOQ6ZNB7 445 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 PASD1Q8IV76 773 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 LRRC34Q8IZ02 419 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 FBXL16Q8N461 479 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 CFAP61Q8NHU2 1237 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 FBF1Q8TES7 1133 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 GMCL1Q96IK5 515 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 AIFM3Q96NN9 605 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 RPRD1AQ96P16 312 aaPredicted RBP9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 NEURL2Q9BR09 285 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 WACQ9BTA9 647 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 INTS2Q9H0H0 1204 aaKnown RBP9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 ESF1Q9H501 851 aaKnown RBP9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 CLEC4AQ9UMR7 237 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 AP3M1Q9Y2T2 418 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 PCDHB15Q9Y5E8 787 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 CACNG2Q9Y698 323 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 STON1Q9Y6Q2 735 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 INO80Q9ULG1 1556 aaPredicted RBP9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 BCL9O00512 1426 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 C5orf60A6NFR6 353 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 STX16-NPEPL1H3BU86 382 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 TRIM77I1YAP6 450 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 HMGN1P05114 100 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 NQO1P15559 274 aaKnown RBP9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 EPB42P16452 691 aa9.17□□□□□ -0.94
MCF2L2-203ENST00000447025 TMEM11P17152 192 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms