RNA–Protein interactions for RNA: ENST00000445752.5

CCDC144B-202, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2 BASIC

Gene CCDC144B, Length 2,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-202ENST00000445752 SPOPLQ6IQ16 392 aa17.17■□□□□ 0.34
CCDC144B-202ENST00000445752 ENOSF1Q7L5Y1 443 aa17.17■□□□□ 0.34
CCDC144B-202ENST00000445752 SCFD2Q8WU76 684 aa17.17■□□□□ 0.34
CCDC144B-202ENST00000445752 PDGFCQ9NRA1 345 aa17.17■□□□□ 0.34
CCDC144B-202ENST00000445752 ZNFX1Q9P2E3 1918 aaKnown RBP17.17■□□□□ 0.34
CCDC144B-202ENST00000445752 KRIT1O00522 736 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 LGR5O75473 907 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 ZBTB33Q86T24 672 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 RASGEF1CQ8N431 466 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 ATP8B4Q8TF62 1192 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 IFT81Q8WYA0 676 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 TAF1DQ9H5J8 278 aaPredicted RBP17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 ADGRA2Q96PE1 1338 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 CLDN3O15551 220 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 TNFRSF8P28908 595 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 EPHB4P54760 987 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 HADHBP55084 474 aaKnown RBP17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 LAMTOR4Q0VGL1 99 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 MKRN4PQ13434 485 aaPredicted RBP17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 PLCB4Q15147 1175 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 LDLRAD1Q5T700 205 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 IER5Q5VY09 327 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 CCDC62Q6P9F0 684 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 PLPPR4Q7Z2D5 763 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 RNF149Q8NC42 400 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 TRAPPC12Q8WVT3 735 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 DDX1Q92499 740 aaKnown RBP17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 TCHPQ9BT92 498 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 GDF3Q9NR23 364 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 VPS18Q9P253 973 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 TRPC6Q9Y210 931 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 ALG6Q9Y672 507 aa17.16■□□□□ 0.34
CCDC144B-202ENST00000445752 GLTPD2A6NH11 291 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 ZBTB42B2RXF5 422 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 PHACTR2O75167 634 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 VNN1O95497 513 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 CARSP49589 748 aaKnown RBP17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 DCAF12L1Q5VU92 463 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 ZNF771Q7L3S4 317 aaPredicted RBP17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 TCP11Q8WWU5 503 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 ZNF653Q96CK0 615 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 CALR3Q96L12 384 aaKnown RBP17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 NFU1Q9UMS0 254 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 CLEC11AQ9Y240 323 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 FGGP02679 453 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 ITGA4P13612 1032 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 EFNA5P52803 228 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 FAM193AP78312 1265 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 MKRN3Q13064 507 aaKnown RBP17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 MESDQ14696 234 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 C11orf63Q6NUN7 778 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 ZNF668Q96K58 619 aaPredicted RBP17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 FAM81BQ96LP2 452 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 CGRRF1Q99675 332 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 MRPL4Q9BYD3 311 aaKnown RBP17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 DDX47Q9H0S4 455 aaKnown RBP17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 PNMA3Q9UL41 463 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 PPME1Q9Y570 386 aa17.15■□□□□ 0.34
CCDC144B-202ENST00000445752 MSCO60682 206 aa17.14■□□□□ 0.33
CCDC144B-202ENST00000445752 TNFSF9P41273 254 aa17.14■□□□□ 0.33
CCDC144B-202ENST00000445752 ZNF211Q13398 564 aaPredicted RBP17.14■□□□□ 0.33
CCDC144B-202ENST00000445752 MXD4Q14582 209 aaPredicted RBP17.14■□□□□ 0.33
CCDC144B-202ENST00000445752 TTLL4Q14679 1199 aa17.14■□□□□ 0.33
CCDC144B-202ENST00000445752 EMBQ6PCB8 327 aa17.14■□□□□ 0.33
CCDC144B-202ENST00000445752 ZPBP2Q6X784 338 aa17.14■□□□□ 0.33
CCDC144B-202ENST00000445752 RHPN2Q8IUC4 686 aa17.14■□□□□ 0.33
CCDC144B-202ENST00000445752 ZBTB8OSQ8IWT0 167 aa17.14■□□□□ 0.33
CCDC144B-202ENST00000445752 OR5B17Q8NGF7 314 aa17.14■□□□□ 0.33
CCDC144B-202ENST00000445752 ZBTB10Q96DT7 871 aa17.14■□□□□ 0.33
CCDC144B-202ENST00000445752 NUP85Q9BW27 656 aa17.14■□□□□ 0.33
CCDC144B-202ENST00000445752 FAN1Q9Y2M0 1017 aa17.14■□□□□ 0.33
CCDC144B-202ENST00000445752 CNTNAP2Q9UHC6 1331 aa17.14■□□□□ 0.33
CCDC144B-202ENST00000445752 ASB14A6NK59 587 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 SART1O43290 800 aaKnown RBP17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 PRKCBP05771 671 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 GJB1P08034 283 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 AARSP49588 968 aaKnown RBP eCLIP17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 TCEAL1Q15170 157 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 TRADDQ15628 312 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 NAA35Q5VZE5 725 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 ARMCX2Q7L311 632 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 SHCBP1Q8NEM2 672 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 ZNF564Q8TBZ8 553 aaPredicted RBP17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 FAM71BQ8TC56 605 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 CASKIN2Q8WXE0 1202 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 ALG3Q92685 438 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 BTBD6Q96KE9 485 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 RNPC3Q96LT9 517 aaKnown RBP17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 CCDC113Q9H0I3 377 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 SMARCAD1Q9H4L7 1026 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 MED4Q9NPJ6 270 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 ZC3H4Q9UPT8 1303 aaKnown RBP17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 CCDC188H7C350 402 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 GAS2O43903 313 aaKnown RBP17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 GRIN3BO60391 1043 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 TOM1L1O75674 476 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 PAK2Q13177 524 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 MAPK6Q16659 721 aa17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 CDCA2Q69YH5 1023 aaPredicted RBP17.13■□□□□ 0.33
CCDC144B-202ENST00000445752 ACAD10Q6JQN1 1059 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms