RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 PCDHA7Q9UN72 937 aa20.56■□□□□ 0.88
HDAC4-203ENST00000445704 HCFC2Q9Y5Z7 792 aa20.56■□□□□ 0.88
HDAC4-203ENST00000445704 TTC28Q96AY4 2481 aa20.56■□□□□ 0.88
HDAC4-203ENST00000445704 SMIM28A0A1B0GU29 152 aa20.55■□□□□ 0.88
HDAC4-203ENST00000445704 TNFRSF10AO00220 468 aa20.55■□□□□ 0.88
HDAC4-203ENST00000445704 KIF4AO95239 1232 aa20.55■□□□□ 0.88
HDAC4-203ENST00000445704 YARSP54577 528 aaKnown RBP20.55■□□□□ 0.88
HDAC4-203ENST00000445704 GTF2BQ00403 316 aa20.55■□□□□ 0.88
HDAC4-203ENST00000445704 BMS1Q14692 1282 aaKnown RBP20.55■□□□□ 0.88
HDAC4-203ENST00000445704 FUT10Q6P4F1 479 aa20.55■□□□□ 0.88
HDAC4-203ENST00000445704 SLC39A4Q6P5W5 647 aa20.55■□□□□ 0.88
HDAC4-203ENST00000445704 HASPINQ8TF76 798 aa20.55■□□□□ 0.88
HDAC4-203ENST00000445704 STAMQ92783 540 aa20.55■□□□□ 0.88
HDAC4-203ENST00000445704 B3GALT6Q96L58 329 aa20.55■□□□□ 0.88
HDAC4-203ENST00000445704 ZMAT2Q96NC0 199 aaKnown RBP20.55■□□□□ 0.88
HDAC4-203ENST00000445704 GOLGA2P5Q9HBQ8 144 aa20.55■□□□□ 0.88
HDAC4-203ENST00000445704 CD320Q9NPF0 282 aa20.55■□□□□ 0.88
HDAC4-203ENST00000445704 STK39Q9UEW8 545 aa20.55■□□□□ 0.88
HDAC4-203ENST00000445704 TRIP11Q15643 1979 aa20.55■□□□□ 0.88
HDAC4-203ENST00000445704 C2CD2LO14523 706 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 HNRNPDLO14979 420 aaKnown RBP20.54■□□□□ 0.88
HDAC4-203ENST00000445704 CLDN3O15551 220 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 IGFBP6P24592 240 aaPredicted RBP20.54■□□□□ 0.88
HDAC4-203ENST00000445704 ME1P48163 572 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 LIG4P49917 911 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 SOX4Q06945 474 aaPredicted RBP20.54■□□□□ 0.88
HDAC4-203ENST00000445704 SMAD2Q15796 467 aaKnown RBP20.54■□□□□ 0.88
HDAC4-203ENST00000445704 ANKRD54Q6NXT1 300 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 SYCE2Q6PIF2 218 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 MAP4K3Q8IVH8 894 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 SLC22A17Q8WUG5 538 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 DHX58Q96C10 678 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 ACAP3Q96P50 834 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 KLHL5Q96PQ7 755 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 IKZF4Q9H2S9 585 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 ST6GALNAC4Q9H4F1 302 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 MRPL17Q9NRX2 175 aaKnown RBP20.54■□□□□ 0.88
HDAC4-203ENST00000445704 TOPORSQ9NS56 1045 aaPredicted RBP20.54■□□□□ 0.88
HDAC4-203ENST00000445704 RCOR1Q9UKL0 485 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 CFAP45Q9UL16 551 aa20.54■□□□□ 0.88
HDAC4-203ENST00000445704 TISP43B9A030 160 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 PPP1R37O75864 691 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 URODP06132 367 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 CNPP09543 421 aaKnown RBP20.53■□□□□ 0.88
HDAC4-203ENST00000445704 EPCAMP16422 314 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 SCP2P22307 547 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 GLUD2P49448 558 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 SLC10A6Q3KNW5 377 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 ZBTB41Q5SVQ8 909 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 KIAA0319Q5VV43 1072 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 ZNF720Q7Z2F6 126 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 APOL5Q9BWW9 433 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 STRA6Q9BX79 667 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 CHST7Q9NS84 486 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 TBC1D7Q9P0N9 293 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 CNTN3Q9P232 1028 aa20.53■□□□□ 0.88
HDAC4-203ENST00000445704 USP15Q9Y4E8 981 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-203ENST00000445704 FRMD3A2A2Y4 597 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 ANKRD63C9JTQ0 380 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 FAM189A1O60320 539 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 TADA2AO75478 443 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 SRGAP2BP0DMP2 458 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 IDEP14735 1019 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 KCNE1P15382 129 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 GAP43P17677 238 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 TNFSF9P41273 254 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 MATR3P43243 847 aaKnown RBP eCLIP20.52■□□□□ 0.88
HDAC4-203ENST00000445704 DSG1Q02413 1049 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 RESP18Q5W5W9 173 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 CASP10Q92851 521 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 FGFBP2Q9BYJ0 223 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 S1PR5Q9H228 398 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 KBTBD4Q9NVX7 518 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 SEL1LQ9UBV2 794 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 FAM50BQ9Y247 325 aa20.52■□□□□ 0.88
HDAC4-203ENST00000445704 CITO14578 2027 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 A0A0B4J269 797 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 CXCL8P10145 99 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 CLCNKBP51801 687 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 CASP5P51878 434 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 ZP2Q05996 745 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 KCNA1Q09470 495 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 BECN1Q14457 450 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 CD300LGQ6UXG3 332 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 TMEM130Q8N3G9 435 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 TMEM87AQ8NBN3 555 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 C3orf58Q8NDZ4 430 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 C18orf25Q96B23 403 aaPredicted RBP20.51■□□□□ 0.87
HDAC4-203ENST00000445704 EMILIN2Q9BXX0 1053 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 TNMDQ9H2S6 317 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 MRPL44Q9H9J2 332 aaKnown RBP20.51■□□□□ 0.87
HDAC4-203ENST00000445704 CDH22Q9UJ99 828 aa20.51■□□□□ 0.87
HDAC4-203ENST00000445704 PDCD11Q14690 1871 aaKnown RBP20.51■□□□□ 0.87
HDAC4-203ENST00000445704 SF3B1O75533 1304 aaKnown RBP eCLIP20.51■□□□□ 0.87
HDAC4-203ENST00000445704 TMEM189-UBE2V1I3L0A0 370 aa20.5■□□□□ 0.87
HDAC4-203ENST00000445704 TEX28O15482 410 aa20.5■□□□□ 0.87
HDAC4-203ENST00000445704 MYBP10242 640 aa20.5■□□□□ 0.87
HDAC4-203ENST00000445704 KLRC2P26717 231 aa20.5■□□□□ 0.87
HDAC4-203ENST00000445704 CLCN4P51793 760 aa20.5■□□□□ 0.87
HDAC4-203ENST00000445704 UPP1Q16831 310 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms