RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 GRIK3Q13003 919 aa26.18■■□□□ 1.78
C9orf3-207ENST00000445181 GRAMD1CQ8IYS0 662 aa26.18■■□□□ 1.78
C9orf3-207ENST00000445181 ACAP3Q96P50 834 aa26.18■■□□□ 1.78
C9orf3-207ENST00000445181 TMEM175Q9BSA9 504 aa26.18■■□□□ 1.78
C9orf3-207ENST00000445181 TOPORSQ9NS56 1045 aaPredicted RBP26.18■■□□□ 1.78
C9orf3-207ENST00000445181 FAN1Q9Y2M0 1017 aa26.18■■□□□ 1.78
C9orf3-207ENST00000445181 ABLIM1O14639 778 aa26.17■■□□□ 1.78
C9orf3-207ENST00000445181 FSCN2O14926 492 aa26.17■■□□□ 1.78
C9orf3-207ENST00000445181 PER2O15055 1255 aa26.17■■□□□ 1.78
C9orf3-207ENST00000445181 B4GALT3O60512 393 aa26.17■■□□□ 1.78
C9orf3-207ENST00000445181 PIGRP01833 764 aa26.17■■□□□ 1.78
C9orf3-207ENST00000445181 CASP1P29466 404 aa26.17■■□□□ 1.78
C9orf3-207ENST00000445181 MCL1Q07820 350 aa26.17■■□□□ 1.78
C9orf3-207ENST00000445181 ALCAMQ13740 583 aa26.17■■□□□ 1.78
C9orf3-207ENST00000445181 CNNM4Q6P4Q7 775 aa26.17■■□□□ 1.78
C9orf3-207ENST00000445181 GJD3Q8N144 294 aa26.17■■□□□ 1.78
C9orf3-207ENST00000445181 GSTCDQ8NEC7 633 aa26.17■■□□□ 1.78
C9orf3-207ENST00000445181 PAGE5Q96GU1 130 aa26.17■■□□□ 1.78
C9orf3-207ENST00000445181 ACCSQ96QU6 501 aa26.17■■□□□ 1.78
C9orf3-207ENST00000445181 EXOC7Q9UPT5 735 aa26.17■■□□□ 1.78
C9orf3-207ENST00000445181 TDRD15B5MCY1 1934 aaKnown RBP26.17■■□□□ 1.78
C9orf3-207ENST00000445181 FAM237AA0A1B0GTK4 181 aa26.16■■□□□ 1.78
C9orf3-207ENST00000445181 THP07101 528 aa26.16■■□□□ 1.78
C9orf3-207ENST00000445181 MYBP10242 640 aa26.16■■□□□ 1.78
C9orf3-207ENST00000445181 SSTR3P32745 418 aaPredicted RBP26.16■■□□□ 1.78
C9orf3-207ENST00000445181 CUL4BQ13620 913 aa26.16■■□□□ 1.78
C9orf3-207ENST00000445181 L1TD1Q5T7N2 865 aaKnown RBP26.16■■□□□ 1.78
C9orf3-207ENST00000445181 STXBP4Q6ZWJ1 553 aa26.16■■□□□ 1.78
C9orf3-207ENST00000445181 COLGALT2Q8IYK4 626 aa26.16■■□□□ 1.78
C9orf3-207ENST00000445181 GOLPH3LQ9H4A5 285 aa26.16■■□□□ 1.78
C9orf3-207ENST00000445181 ENTPD7Q9NQZ7 604 aa26.16■■□□□ 1.78
C9orf3-207ENST00000445181 CD207Q9UJ71 328 aa26.16■■□□□ 1.78
C9orf3-207ENST00000445181 PRG3Q9Y2Y8 225 aaPredicted RBP26.16■■□□□ 1.78
C9orf3-207ENST00000445181 NRP1O14786 923 aa26.15■■□□□ 1.78
C9orf3-207ENST00000445181 MBTPS2O43462 519 aa26.15■■□□□ 1.78
C9orf3-207ENST00000445181 PPP1R37O75864 691 aa26.15■■□□□ 1.78
C9orf3-207ENST00000445181 CASP5P51878 434 aa26.15■■□□□ 1.78
C9orf3-207ENST00000445181 SEZ6Q53EL9 994 aa26.15■■□□□ 1.78
C9orf3-207ENST00000445181 PLPP4Q5VZY2 271 aa26.15■■□□□ 1.78
C9orf3-207ENST00000445181 UNC13DQ70J99 1090 aa26.15■■□□□ 1.78
C9orf3-207ENST00000445181 SYCP3Q8IZU3 236 aa26.15■■□□□ 1.78
C9orf3-207ENST00000445181 HPS3Q969F9 1004 aa26.15■■□□□ 1.78
C9orf3-207ENST00000445181 IGSF21Q96ID5 467 aa26.15■■□□□ 1.78
C9orf3-207ENST00000445181 TCF25Q9BQ70 676 aa26.15■■□□□ 1.78
C9orf3-207ENST00000445181 MSTO1Q9BUK6 570 aa26.15■■□□□ 1.78
C9orf3-207ENST00000445181 PTGESO14684 152 aa26.14■■□□□ 1.78
C9orf3-207ENST00000445181 DSC1Q08554 894 aa26.14■■□□□ 1.78
C9orf3-207ENST00000445181 SMAD4Q13485 552 aaKnown RBP26.14■■□□□ 1.78
C9orf3-207ENST00000445181 DUSP6Q16828 381 aa26.14■■□□□ 1.78
C9orf3-207ENST00000445181 GLRA4Q5JXX5 417 aa26.14■■□□□ 1.78
C9orf3-207ENST00000445181 TMEM173Q86WV6 379 aaPredicted RBP26.14■■□□□ 1.78
C9orf3-207ENST00000445181 MSLNLQ96KJ4 702 aa26.14■■□□□ 1.78
C9orf3-207ENST00000445181 CDCA3Q99618 268 aaPredicted RBP26.14■■□□□ 1.78
C9orf3-207ENST00000445181 STRA6Q9BX79 667 aa26.14■■□□□ 1.78
C9orf3-207ENST00000445181 FGFBP2Q9BYJ0 223 aa26.14■■□□□ 1.78
C9orf3-207ENST00000445181 HAPLN2Q9GZV7 340 aa26.14■■□□□ 1.78
C9orf3-207ENST00000445181 CXCL16Q9H2A7 254 aa26.14■■□□□ 1.78
C9orf3-207ENST00000445181 EPHX3Q9H6B9 360 aa26.14■■□□□ 1.78
C9orf3-207ENST00000445181 NGRNQ9NPE2 291 aaKnown RBP26.14■■□□□ 1.78
C9orf3-207ENST00000445181 CLEC1BQ9P126 229 aa26.14■■□□□ 1.78
C9orf3-207ENST00000445181 MUC3AQ02505 3323 aa26.13■■□□□ 1.77
C9orf3-207ENST00000445181 ANKRD63C9JTQ0 380 aa26.13■■□□□ 1.77
C9orf3-207ENST00000445181 GLP2RO95838 553 aa26.13■■□□□ 1.77
C9orf3-207ENST00000445181 CA8P35219 290 aa26.13■■□□□ 1.77
C9orf3-207ENST00000445181 KCNA1Q09470 495 aa26.13■■□□□ 1.77
C9orf3-207ENST00000445181 TUSC3Q13454 348 aa26.13■■□□□ 1.77
C9orf3-207ENST00000445181 SMAD2Q15796 467 aaKnown RBP26.13■■□□□ 1.77
C9orf3-207ENST00000445181 KYAT1Q16773 422 aa26.13■■□□□ 1.77
C9orf3-207ENST00000445181 FAM26FQ5R3K3 315 aa26.13■■□□□ 1.77
C9orf3-207ENST00000445181 SLFN12LQ6IEE8 588 aa26.13■■□□□ 1.77
C9orf3-207ENST00000445181 SLC39A4Q6P5W5 647 aa26.13■■□□□ 1.77
C9orf3-207ENST00000445181 TMC7Q7Z402 723 aa26.13■■□□□ 1.77
C9orf3-207ENST00000445181 KHSRPQ92945 711 aaKnown RBP eCLIP26.13■■□□□ 1.776e-6■■■■□ 21
C9orf3-207ENST00000445181 PRKAG3Q9UGI9 489 aa26.13■■□□□ 1.77
C9orf3-207ENST00000445181 BARX2Q9UMQ3 279 aaPredicted RBP26.13■■□□□ 1.77
C9orf3-207ENST00000445181 PVALEFA0A1B0GWK0 134 aa26.12■■□□□ 1.77
C9orf3-207ENST00000445181 PRPF6O94906 941 aaKnown RBP26.12■■□□□ 1.77
C9orf3-207ENST00000445181 ZNF202O95125 648 aa26.12■■□□□ 1.77
C9orf3-207ENST00000445181 CLTAP09496 248 aa26.12■■□□□ 1.77
C9orf3-207ENST00000445181 BMS1Q14692 1282 aaKnown RBP26.12■■□□□ 1.77
C9orf3-207ENST00000445181 BCL7CQ8WUZ0 217 aaPredicted RBP26.12■■□□□ 1.77
C9orf3-207ENST00000445181 CCDC34Q96HJ3 373 aa26.12■■□□□ 1.77
C9orf3-207ENST00000445181 SNX27Q96L92 541 aa26.12■■□□□ 1.77
C9orf3-207ENST00000445181 COLEC11Q9BWP8 271 aa26.12■■□□□ 1.77
C9orf3-207ENST00000445181 C1QTNF1Q9BXJ1 281 aa26.12■■□□□ 1.77
C9orf3-207ENST00000445181 TMEM206Q9H813 350 aa26.12■■□□□ 1.77
C9orf3-207ENST00000445181 A0A0B4J269 797 aa26.11■■□□□ 1.77
C9orf3-207ENST00000445181 FSD2A1L4K1 749 aa26.11■■□□□ 1.77
C9orf3-207ENST00000445181 CASTOR2A6NHX0 329 aa26.11■■□□□ 1.77
C9orf3-207ENST00000445181 HIDE1A8MVS5 230 aa26.11■■□□□ 1.77
C9orf3-207ENST00000445181 TISP43B9A030 160 aa26.11■■□□□ 1.77
C9orf3-207ENST00000445181 OGTO15294 1046 aa26.11■■□□□ 1.77
C9orf3-207ENST00000445181 MYL1P05976 194 aa26.11■■□□□ 1.77
C9orf3-207ENST00000445181 RBM10P98175 930 aaKnown RBP26.11■■□□□ 1.77
C9orf3-207ENST00000445181 ZP2Q05996 745 aa26.11■■□□□ 1.77
C9orf3-207ENST00000445181 KRBA2Q6ZNG9 492 aa26.11■■□□□ 1.77
C9orf3-207ENST00000445181 DDX53Q86TM3 631 aaKnown RBP26.11■■□□□ 1.77
C9orf3-207ENST00000445181 VPS52Q8N1B4 723 aa26.11■■□□□ 1.77
C9orf3-207ENST00000445181 POMGNT1Q8WZA1 660 aa26.11■■□□□ 1.77
C9orf3-207ENST00000445181 IKZF4Q9H2S9 585 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms