RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 AKAP3O75969 853 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 ANPEPP15144 967 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 VCAM1P19320 739 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 CDK7P50613 346 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 KRT81Q14533 505 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 EPHA7Q15375 998 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 LGSNQ5TDP6 509 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 OLFML1Q6UWY5 402 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 USP17L1Q7RTZ2 530 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 RABGAP1Q9Y3P9 1069 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 ARAP3Q8WWN8 1544 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 CSF1RP07333 972 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 PYGMP11217 842 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 VSTM1Q6UX27 236 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 C9orf72Q96LT7 481 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 GLT8D2Q9H1C3 349 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 RSPH10B2B2RC85 870 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 ERVV-2B6SEH9 535 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 RSPH10BP0C881 870 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 RARBP10826 455 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 PDK3Q15120 406 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 TMEM119Q4V9L6 283 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 FOXR2Q6PJQ5 311 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 FAM186BQ8IYM0 893 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 TAS2R14Q9NYV8 317 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 PSMC3IPQ9P2W1 217 aaPredicted RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 ALDH18A1P54886 795 aaKnown RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 ANKRD23Q86SG2 305 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 SCFD1Q8WVM8 642 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 IRGQQ8WZA9 623 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 SLCO1B3Q9NPD5 702 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 RPA3P35244 121 aaPredicted RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 ESRRGP62508 458 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 CENPUQ71F23 418 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 PRPF39Q86UA1 669 aaKnown RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 OSCARQ8IYS5 282 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 ZBTB8BQ8NAP8 495 aaPredicted RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 DYNLL2Q96FJ2 89 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 GPCPD1Q9NPB8 672 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 UMODL1Q5DID0 1318 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 FAM205AQ6ZU69 1335 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 KDM3AQ9Y4C1 1321 aa5.32□□□□□ -1.56
HERC1-201ENST00000443617 ZCCHC11Q5TAX3 1644 aaKnown RBP5.32□□□□□ -1.56
HERC1-201ENST00000443617 GCNT3O95395 438 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 DYNLL1P63167 89 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 TMPRSS15P98073 1019 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 FAM136AQ96C01 138 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 CDC42EP4Q9H3Q1 356 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 C2CD2LO14523 706 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 SLC26A4O43511 780 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 LRRN2O75325 713 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 GOLGA8HP0CJ92 632 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 GAP43P17677 238 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 XIAPP98170 497 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 ZCRB1Q8TBF4 217 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 NCSTNQ92542 709 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 LRGUKQ96M69 825 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 TUBGCP5Q96RT8 1024 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 ETNK2Q9NVF9 386 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 A6NJR5 290 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 KRT5P13647 590 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 BFSP1Q12934 665 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 ACAD11Q709F0 780 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 SATL1Q86VE3 508 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 CRLF3Q8IUI8 442 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 PHC3Q8NDX5 983 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 C17orf50Q8WW18 174 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 SHISA4Q96DD7 197 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 OXNAD1Q96HP4 312 aaPredicted RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 STK10O94804 968 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 PABPC4LP0CB38 370 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 HARSP12081 509 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 MYL7Q01449 175 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 OVGP1Q12889 678 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 ULK2Q8IYT8 1036 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 SLC20A1Q8WUM9 679 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 SPOCK2Q92563 424 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 KRT35Q92764 455 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 GJA10Q969M2 543 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 DDX3YO15523 660 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 CYP27B1O15528 508 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 MAP3K13O43283 966 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 SORBS3O60504 671 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 CREB1P16220 341 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 HPCAP84074 193 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 PDE1BQ01064 536 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 GJB7Q6PEY0 223 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 RBM44Q6ZP01 1051 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 PASD1Q8IV76 773 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 CYP4X1Q8N118 509 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 PPP4R1Q8TF05 950 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 DDX43Q9NXZ2 648 aaKnown RBP5.31□□□□□ -1.56
HERC1-201ENST00000443617 KCNA6P17658 529 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 ADRM1Q16186 407 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 LVRNQ6Q4G3 990 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 NSMFQ6X4W1 530 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 TLE6Q9H808 572 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 CNTNAP5Q8WYK1 1306 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 CYP1A2P05177 515 aa5.31□□□□□ -1.56
HERC1-201ENST00000443617 KRT4P19013 534 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms