RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 ATP8B3O60423 1300 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 FOXN3O00409 490 aaPredicted RBP23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 PPP1R37O75864 691 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 ACAP3Q96P50 834 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 NT5DC1Q5TFE4 455 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.77■■□□□ 1.49e-12■■■■■ 142.3
CTDSPL-206ENST00000443503 HACL1Q9UJ83 578 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 PHF2O75151 1096 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 PSMC6P62333 389 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 EZH2Q15910 746 aaKnown RBP23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 TTC39CQ8N584 583 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 GBP7Q8N8V2 638 aaPredicted RBP23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 CYP2W1Q8TAV3 490 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 NUDCD1Q96RS6 583 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 ARHGAP20Q9P2F6 1191 aa23.77■■□□□ 1.4
CTDSPL-206ENST00000443503 DBN1Q16643 649 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 KLHL38Q2WGJ6 581 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 MMGT1Q8N4V1 131 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 C9orf72Q96LT7 481 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 TRIM55Q9BYV6 548 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 AKAP3O75969 853 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 MAGEA9P43362 315 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 SKA2Q8WVK7 121 aaPredicted RBP23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 NUDT12Q9BQG2 462 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 CBWD1Q9BRT8 395 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 SNX9Q9Y5X1 595 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 P4HA2O15460 535 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 ATG16L1Q676U5 607 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 HEATR6Q6AI08 1181 aaKnown RBP23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 C1orf228Q6PIY5 440 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 CBWD2Q8IUF1 395 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 ADAM33Q9BZ11 813 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 SMARCAD1Q9H4L7 1026 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 TRAPPC11Q7Z392 1133 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 JAMLQ86YT9 394 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 IL17RAQ96F46 866 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 TBX20Q9UMR3 447 aa23.76■■□□□ 1.39
CTDSPL-206ENST00000443503 TAP1Q03518 808 aa23.75■■□□□ 1.39
CTDSPL-206ENST00000443503 GRIK5Q16478 980 aa23.75■■□□□ 1.39
CTDSPL-206ENST00000443503 XRRA1Q6P2D8 792 aa23.75■■□□□ 1.39
CTDSPL-206ENST00000443503 CDR2LQ86X02 465 aaPredicted RBP23.75■■□□□ 1.39
CTDSPL-206ENST00000443503 ATP11CQ8NB49 1132 aa23.75■■□□□ 1.39
CTDSPL-206ENST00000443503 CHMP6Q96FZ7 201 aa23.75■■□□□ 1.39
CTDSPL-206ENST00000443503 ROR1Q01973 937 aa23.75■■□□□ 1.39
CTDSPL-206ENST00000443503 MYLK4Q86YV6 388 aaPredicted RBP23.75■■□□□ 1.39
CTDSPL-206ENST00000443503 FAM118BQ9BPY3 351 aa23.75■■□□□ 1.39
CTDSPL-206ENST00000443503 PACSIN1Q9BY11 444 aa23.75■■□□□ 1.39
CTDSPL-206ENST00000443503 SMAD1Q15797 465 aaKnown RBP23.75■■□□□ 1.39
CTDSPL-206ENST00000443503 SGSM1Q2NKQ1 1148 aa23.75■■□□□ 1.39
CTDSPL-206ENST00000443503 THAP2Q9H0W7 228 aa23.75■■□□□ 1.39
CTDSPL-206ENST00000443503 RICTORQ6R327 1708 aa23.75■■□□□ 1.39
CTDSPL-206ENST00000443503 FER1L4A9Z1Z3 1794 aa23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 NCF2P19878 526 aaPredicted RBP23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 ACTR2P61160 394 aa23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 RBBP5Q15291 538 aaKnown RBP23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 RIC1Q4ADV7 1423 aa23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 NFIBO00712 420 aa23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 BYSLQ13895 437 aaKnown RBP23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 MCEEQ96PE7 176 aa23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 PNMA5Q96PV4 448 aa23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 DCTN4Q9UJW0 460 aa23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 TYW5A2RUC4 315 aaKnown RBP23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 WEE2P0C1S8 567 aa23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 RGS7P49802 495 aa23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 HERVK_113P62684 666 aa23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 TPCN2Q8NHX9 752 aa23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 SENP7Q9BQF6 1050 aa23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 PPARGC1AQ9UBK2 798 aaKnown RBP23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 FAM163AQ96GL9 167 aaPredicted RBP23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 OSBPL8Q9BZF1 889 aa23.74■■□□□ 1.39
CTDSPL-206ENST00000443503 PDGFRAP16234 1089 aa23.73■■□□□ 1.39
CTDSPL-206ENST00000443503 PLCB4Q15147 1175 aa23.73■■□□□ 1.39
CTDSPL-206ENST00000443503 CSPG5O95196 566 aa23.73■■□□□ 1.39
CTDSPL-206ENST00000443503 EIF3EP60228 445 aaKnown RBP23.73■■□□□ 1.39
CTDSPL-206ENST00000443503 NBPF9Q3BBW0 867 aa23.73■■□□□ 1.39
CTDSPL-206ENST00000443503 DEFB132Q7Z7B7 95 aa23.73■■□□□ 1.39
CTDSPL-206ENST00000443503 CRLF3Q8IUI8 442 aa23.73■■□□□ 1.39
CTDSPL-206ENST00000443503 ZIM3Q96PE6 472 aa23.73■■□□□ 1.39
CTDSPL-206ENST00000443503 TGS1Q96RS0 853 aaKnown RBP23.73■■□□□ 1.39
CTDSPL-206ENST00000443503 SPAG7O75391 227 aa23.73■■□□□ 1.39
CTDSPL-206ENST00000443503 GPRASP2Q96D09 838 aa23.73■■□□□ 1.39
CTDSPL-206ENST00000443503 GBP5Q96PP8 586 aa23.73■■□□□ 1.39
CTDSPL-206ENST00000443503 RPS12P25398 132 aaKnown RBP23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 NME3Q13232 169 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 E2F4Q16254 413 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 HIF1AQ16665 826 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 JADE1Q6IE81 842 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 VPS11Q9H270 941 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 MYO5BQ9ULV0 1848 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 WDR75Q8IWA0 830 aaKnown RBP23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 RYBPQ8N488 228 aaPredicted RBP23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 GMCL1P1Q8NEA9 526 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 HNRNPLLQ8WVV9 542 aaKnown RBP23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 PIN4Q9Y237 131 aaKnown RBP23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 CASQ2O14958 399 aaPredicted RBP23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 OPHN1O60890 802 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 RFC5P40937 340 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 ANKMY2Q8IV38 441 aa23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 RBM15Q96T37 977 aaKnown RBP eCLIP23.72■■□□□ 1.39
CTDSPL-206ENST00000443503 TRAIPQ9BWF2 469 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms