RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 RAB20Q9NX57 234 aa20.65■□□□□ 0.9
SNX17-203ENST00000440760 COQ4Q9Y3A0 265 aa20.65■□□□□ 0.9
SNX17-203ENST00000440760 MEFVO15553 781 aaPredicted RBP20.64■□□□□ 0.89
SNX17-203ENST00000440760 ZSCAN12O43309 604 aa20.64■□□□□ 0.89
SNX17-203ENST00000440760 MYCP01106 439 aaPredicted RBP20.64■□□□□ 0.89
SNX17-203ENST00000440760 C4BPAP04003 597 aaKnown RBP20.64■□□□□ 0.89
SNX17-203ENST00000440760 ENPEPQ07075 957 aa20.64■□□□□ 0.89
SNX17-203ENST00000440760 SNX17Q15036 470 aa20.64■□□□□ 0.89
SNX17-203ENST00000440760 NYAP1Q6ZVC0 841 aa20.64■□□□□ 0.89
SNX17-203ENST00000440760 RNF180Q86T96 592 aa20.64■□□□□ 0.89
SNX17-203ENST00000440760 SYN2Q92777 582 aaPredicted RBP20.64■□□□□ 0.89
SNX17-203ENST00000440760 AIPL1Q9NZN9 384 aa20.64■□□□□ 0.89
SNX17-203ENST00000440760 TFR2Q9UP52 801 aa20.64■□□□□ 0.89
SNX17-203ENST00000440760 GFPT2O94808 682 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 VNN1O95497 513 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 CTSHP09668 335 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 MCF2P10911 925 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 HOXA11P31270 313 aaPredicted RBP20.63■□□□□ 0.89
SNX17-203ENST00000440760 PIK3CAP42336 1068 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 KIF11P52732 1056 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 CYP27A1Q02318 531 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 ARHGEF6Q15052 776 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 ZACNQ401N2 412 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 TMEM130Q8N3G9 435 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 CCDC42Q96M95 316 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 BEGAINQ9BUH8 593 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 MTMR12Q9C0I1 747 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 DEF6Q9H4E7 631 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 HMX1Q9NP08 348 aaPredicted RBP20.63■□□□□ 0.89
SNX17-203ENST00000440760 ZNF263O14978 683 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 HLA-DRAP01903 254 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 SERPING1P05155 500 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 STAG3L1P0CL83 205 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 EIF4BP23588 611 aaKnown RBP20.63■□□□□ 0.89
SNX17-203ENST00000440760 CYLC1P35663 651 aaPredicted RBP20.63■□□□□ 0.89
SNX17-203ENST00000440760 HSP90AA2PQ14568 343 aaPredicted RBP20.63■□□□□ 0.89
SNX17-203ENST00000440760 SLC9C1Q4G0N8 1177 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 LHX8Q68G74 356 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 EFCAB13Q8IY85 973 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 PPM1KQ8N3J5 372 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 PCSK9Q8NBP7 692 aaKnown RBP20.63■□□□□ 0.89
SNX17-203ENST00000440760 STK33Q9BYT3 514 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 LZTFL1Q9NQ48 299 aa20.63■□□□□ 0.89
SNX17-203ENST00000440760 CITO14578 2027 aa20.62■□□□□ 0.89
SNX17-203ENST00000440760 A0A1B0GUA9 196 aa20.62■□□□□ 0.89
SNX17-203ENST00000440760 ACLYP53396 1101 aa20.62■□□□□ 0.89
SNX17-203ENST00000440760 KLHL30Q0D2K2 578 aa20.62■□□□□ 0.89
SNX17-203ENST00000440760 TAF2Q6P1X5 1199 aa20.62■□□□□ 0.89
SNX17-203ENST00000440760 IRF2BP2Q7Z5L9 587 aa20.62■□□□□ 0.89
SNX17-203ENST00000440760 CCDC170Q8IYT3 715 aa20.62■□□□□ 0.89
SNX17-203ENST00000440760 VTI1AQ96AJ9 217 aa20.62■□□□□ 0.89
SNX17-203ENST00000440760 HAUS4Q9H6D7 363 aa20.62■□□□□ 0.89
SNX17-203ENST00000440760 CCP110O43303 1012 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 NPTXRO95502 500 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 ABL1P00519 1130 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 TNNT1P13805 278 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 PRMT2P55345 433 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 CDC42EP1Q00587 391 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 PTPN14Q15678 1187 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 SPOPLQ6IQ16 392 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 WDR49Q8IV35 697 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 TATDN2Q93075 761 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 KREMEN1Q96MU8 473 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 EIF2AQ9BY44 585 aaKnown RBP20.61■□□□□ 0.89
SNX17-203ENST00000440760 RPF1Q9H9Y2 349 aaKnown RBP20.61■□□□□ 0.89
SNX17-203ENST00000440760 MYO6Q9UM54 1294 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 EVI5O60447 810 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 SOX5P35711 763 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 STAT1P42224 750 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 MRPS6P82932 125 aaKnown RBP20.61■□□□□ 0.89
SNX17-203ENST00000440760 GFPT1Q06210 699 aaPredicted RBP20.61■□□□□ 0.89
SNX17-203ENST00000440760 SERINC5Q86VE9 423 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 HELQQ8TDG4 1101 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 NT5C1BQ96P26 610 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 PIN4Q9Y237 131 aaKnown RBP20.61■□□□□ 0.89
SNX17-203ENST00000440760 CDY2AQ9Y6F7 541 aa20.61■□□□□ 0.89
SNX17-203ENST00000440760 TRIP11Q15643 1979 aa20.6■□□□□ 0.89
SNX17-203ENST00000440760 EIF3CLB5ME19 914 aaKnown RBP20.6■□□□□ 0.89
SNX17-203ENST00000440760 AKR1B10O60218 316 aa20.6■□□□□ 0.89
SNX17-203ENST00000440760 CLSTN1O94985 981 aa20.6■□□□□ 0.89
SNX17-203ENST00000440760 CRYBB1P53674 252 aaPredicted RBP20.6■□□□□ 0.89
SNX17-203ENST00000440760 TFAMQ00059 246 aaKnown RBP20.6■□□□□ 0.89
SNX17-203ENST00000440760 PTK2Q05397 1052 aa20.6■□□□□ 0.89
SNX17-203ENST00000440760 MAPK8IP2Q13387 824 aaPredicted RBP20.6■□□□□ 0.89
SNX17-203ENST00000440760 ITGA7Q13683 1181 aa20.6■□□□□ 0.89
SNX17-203ENST00000440760 ASTE1Q2TB18 679 aaPredicted RBP20.6■□□□□ 0.89
SNX17-203ENST00000440760 EIF3CQ99613 913 aaKnown RBP20.6■□□□□ 0.89
SNX17-203ENST00000440760 ADPGKQ9BRR6 497 aa20.6■□□□□ 0.89
SNX17-203ENST00000440760 CELF4Q9BZC1 486 aaKnown RBP20.6■□□□□ 0.89
SNX17-203ENST00000440760 TRMT13Q9NUP7 481 aaKnown RBP20.6■□□□□ 0.89
SNX17-203ENST00000440760 TRIM10Q9UDY6 481 aa20.6■□□□□ 0.89
SNX17-203ENST00000440760 FOXN3O00409 490 aaPredicted RBP20.59■□□□□ 0.89
SNX17-203ENST00000440760 NFICP08651 508 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 CLTAP09496 248 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 HSPA6P17066 643 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 RFX1P22670 979 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 PTGISQ16647 500 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 ZNF571Q7Z3V5 609 aaPredicted RBP20.59■□□□□ 0.89
SNX17-203ENST00000440760 SESTD1Q86VW0 696 aa20.59■□□□□ 0.89
SNX17-203ENST00000440760 NME8Q8N427 588 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms