RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 MATR3P43243 847 aaKnown RBP eCLIP25.86■■□□□ 1.73
VARS-217ENST00000440048 LIG4P49917 911 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 PTPN14Q15678 1187 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 ZC2HC1CQ53FD0 456 aaPredicted RBP25.86■■□□□ 1.73
VARS-217ENST00000440048 XKR4Q5GH76 650 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 GLRA4Q5JXX5 417 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 ALKAL1Q6UXT8 129 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 TAS1R1Q7RTX1 841 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 RNF168Q8IYW5 571 aaPredicted RBP25.86■■□□□ 1.73
VARS-217ENST00000440048 STAMQ92783 540 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 PPP1R10Q96QC0 940 aaKnown RBP25.86■■□□□ 1.73
VARS-217ENST00000440048 HERC2P3Q9BVR0 1158 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 CUEDC2Q9H467 287 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 SEL1LQ9UBV2 794 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 CD207Q9UJ71 328 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 FAM50BQ9Y247 325 aa25.86■■□□□ 1.73
VARS-217ENST00000440048 C5orf42Q9H799 3197 aa25.85■■□□□ 1.73
VARS-217ENST00000440048 HNRNPDLO14979 420 aaKnown RBP25.85■■□□□ 1.73
VARS-217ENST00000440048 CLASP2O75122 1294 aaKnown RBP25.85■■□□□ 1.73
VARS-217ENST00000440048 IDEP14735 1019 aa25.85■■□□□ 1.73
VARS-217ENST00000440048 IL9P15248 144 aa25.85■■□□□ 1.73
VARS-217ENST00000440048 HSP90AA2PQ14568 343 aaPredicted RBP25.85■■□□□ 1.73
VARS-217ENST00000440048 SEZ6Q53EL9 994 aa25.85■■□□□ 1.73
VARS-217ENST00000440048 RESP18Q5W5W9 173 aa25.85■■□□□ 1.73
VARS-217ENST00000440048 ZNF720Q7Z2F6 126 aa25.85■■□□□ 1.73
VARS-217ENST00000440048 MAP4K3Q8IVH8 894 aa25.85■■□□□ 1.73
VARS-217ENST00000440048 IQUBQ8NA54 791 aa25.85■■□□□ 1.73
VARS-217ENST00000440048 SNX27Q96L92 541 aa25.85■■□□□ 1.73
VARS-217ENST00000440048 TNMDQ9H2S6 317 aa25.85■■□□□ 1.73
VARS-217ENST00000440048 KBTBD4Q9NVX7 518 aa25.85■■□□□ 1.73
VARS-217ENST00000440048 ADAM28Q9UKQ2 775 aa25.85■■□□□ 1.73
VARS-217ENST00000440048 SMIM28A0A1B0GU29 152 aa25.84■■□□□ 1.73
VARS-217ENST00000440048 FRMD3A2A2Y4 597 aa25.84■■□□□ 1.73
VARS-217ENST00000440048 KRT85P78386 507 aa25.84■■□□□ 1.73
VARS-217ENST00000440048 LLGL2Q6P1M3 1020 aa25.84■■□□□ 1.73
VARS-217ENST00000440048 TMEM184AQ6ZMB5 413 aa25.84■■□□□ 1.73
VARS-217ENST00000440048 LEO1Q8WVC0 666 aaPredicted RBP25.84■■□□□ 1.73
VARS-217ENST00000440048 GPR62Q9BZJ7 368 aa25.84■■□□□ 1.73
VARS-217ENST00000440048 MRPL44Q9H9J2 332 aaKnown RBP25.84■■□□□ 1.73
VARS-217ENST00000440048 FAM13BQ9NYF5 915 aa25.84■■□□□ 1.73
VARS-217ENST00000440048 TBC1D7Q9P0N9 293 aa25.84■■□□□ 1.73
VARS-217ENST00000440048 PDCD11Q14690 1871 aaKnown RBP25.83■■□□□ 1.73
VARS-217ENST00000440048 POLR2DO15514 142 aaKnown RBP25.83■■□□□ 1.73
VARS-217ENST00000440048 MEFVO15553 781 aaPredicted RBP25.83■■□□□ 1.73
VARS-217ENST00000440048 LILRB3O75022 631 aa25.83■■□□□ 1.73
VARS-217ENST00000440048 TADA2AO75478 443 aa25.83■■□□□ 1.73
VARS-217ENST00000440048 COASYQ13057 564 aa25.83■■□□□ 1.73
VARS-217ENST00000440048 HERC4Q5GLZ8 1057 aaPredicted RBP25.83■■□□□ 1.73
VARS-217ENST00000440048 FUT10Q6P4F1 479 aa25.83■■□□□ 1.73
VARS-217ENST00000440048 SLC39A4Q6P5W5 647 aa25.83■■□□□ 1.73
VARS-217ENST00000440048 TMEM87AQ8NBN3 555 aa25.83■■□□□ 1.73
VARS-217ENST00000440048 STRA6Q9BX79 667 aa25.83■■□□□ 1.73
VARS-217ENST00000440048 LRRC27Q9C0I9 530 aa25.83■■□□□ 1.73
VARS-217ENST00000440048 MRPL17Q9NRX2 175 aaKnown RBP25.83■■□□□ 1.73
VARS-217ENST00000440048 PANK4Q9NVE7 773 aa25.83■■□□□ 1.73
VARS-217ENST00000440048 MBTPS2O43462 519 aa25.82■■□□□ 1.72
VARS-217ENST00000440048 PPP1R37O75864 691 aa25.82■■□□□ 1.72
VARS-217ENST00000440048 KIF4AO95239 1232 aa25.82■■□□□ 1.72
VARS-217ENST00000440048 URODP06132 367 aa25.82■■□□□ 1.72
VARS-217ENST00000440048 KCNE1P15382 129 aa25.82■■□□□ 1.72
VARS-217ENST00000440048 SMAD4Q13485 552 aaKnown RBP25.82■■□□□ 1.72
VARS-217ENST00000440048 SLC10A6Q3KNW5 377 aa25.82■■□□□ 1.72
VARS-217ENST00000440048 HASPINQ8TF76 798 aa25.82■■□□□ 1.72
VARS-217ENST00000440048 HVCN1Q96D96 273 aa25.82■■□□□ 1.72
VARS-217ENST00000440048 SPATA32Q96LK8 384 aa25.82■■□□□ 1.72
VARS-217ENST00000440048 ZMAT2Q96NC0 199 aaKnown RBP25.82■■□□□ 1.72
VARS-217ENST00000440048 OLFML3Q9NRN5 406 aa25.82■■□□□ 1.72
VARS-217ENST00000440048 CNTN3Q9P232 1028 aa25.82■■□□□ 1.72
VARS-217ENST00000440048 ATP6V1DQ9Y5K8 247 aa25.82■■□□□ 1.72
VARS-217ENST00000440048 HCFC2Q9Y5Z7 792 aa25.82■■□□□ 1.72
VARS-217ENST00000440048 ANKRD63C9JTQ0 380 aa25.81■■□□□ 1.72
VARS-217ENST00000440048 C2CD2LO14523 706 aa25.81■■□□□ 1.72
VARS-217ENST00000440048 CLTAP09496 248 aa25.81■■□□□ 1.72
VARS-217ENST00000440048 SRGAP2BP0DMP2 458 aa25.81■■□□□ 1.72
VARS-217ENST00000440048 GLUD2P49448 558 aa25.81■■□□□ 1.72
VARS-217ENST00000440048 KIAA0319Q5VV43 1072 aa25.81■■□□□ 1.72
VARS-217ENST00000440048 SMRP1Q8NCR6 262 aa25.81■■□□□ 1.72
VARS-217ENST00000440048 KLHL5Q96PQ7 755 aa25.81■■□□□ 1.72
VARS-217ENST00000440048 TRIM9Q9C026 710 aa25.81■■□□□ 1.72
VARS-217ENST00000440048 GOLGA2P5Q9HBQ8 144 aa25.81■■□□□ 1.72
VARS-217ENST00000440048 CHST7Q9NS84 486 aa25.81■■□□□ 1.72
VARS-217ENST00000440048 A0A0B4J269 797 aa25.8■■□□□ 1.72
VARS-217ENST00000440048 OGTO15294 1046 aa25.8■■□□□ 1.72
VARS-217ENST00000440048 FAM189A1O60320 539 aa25.8■■□□□ 1.72
VARS-217ENST00000440048 CNPP09543 421 aaKnown RBP25.8■■□□□ 1.72
VARS-217ENST00000440048 AMPD3Q01432 767 aa25.8■■□□□ 1.72
VARS-217ENST00000440048 DSG1Q02413 1049 aa25.8■■□□□ 1.72
VARS-217ENST00000440048 SOX4Q06945 474 aaPredicted RBP25.8■■□□□ 1.72
VARS-217ENST00000440048 ANKRD54Q6NXT1 300 aa25.8■■□□□ 1.72
VARS-217ENST00000440048 CCDC65Q8IXS2 484 aa25.8■■□□□ 1.72
VARS-217ENST00000440048 CASP10Q92851 521 aa25.8■■□□□ 1.72
VARS-217ENST00000440048 B3GALT6Q96L58 329 aa25.8■■□□□ 1.72
VARS-217ENST00000440048 EMILIN2Q9BXX0 1053 aa25.8■■□□□ 1.72
VARS-217ENST00000440048 IKZF4Q9H2S9 585 aa25.8■■□□□ 1.72
VARS-217ENST00000440048 SLC38A7Q9NVC3 462 aa25.8■■□□□ 1.72
VARS-217ENST00000440048 KCNH3Q9ULD8 1083 aa25.8■■□□□ 1.72
VARS-217ENST00000440048 SSX2IPQ9Y2D8 614 aa25.8■■□□□ 1.72
VARS-217ENST00000440048 SF3B1O75533 1304 aaKnown RBP eCLIP25.8■■□□□ 1.724e-7■■■■■ 34.5
VARS-217ENST00000440048 TISP43B9A030 160 aa25.79■■□□□ 1.72
VARS-217ENST00000440048 GCNT3O95395 438 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms