RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 SH2D3AQ9BRG2 576 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 C12orf65Q9H3J6 166 aaKnown RBP12.44□□□□□ -0.42
SMPD4-209ENST00000439886 PREBQ9HCU5 417 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 KLHL11Q9NVR0 708 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 CNOT7Q9UIV1 285 aaKnown RBP12.44□□□□□ -0.42
SMPD4-209ENST00000439886 PAIP2BQ9ULR5 123 aaKnown RBP12.44□□□□□ -0.42
SMPD4-209ENST00000439886 ZNF652Q9Y2D9 606 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 PCDHA1Q9Y5I3 950 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 PEX11AO75192 247 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 TPBGLP0DKB5 382 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 BCRP11274 1271 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 ATP6V1C1P21283 382 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 SP100P23497 879 aaPredicted RBP12.44□□□□□ -0.42
SMPD4-209ENST00000439886 POLGP54098 1239 aaPredicted RBP12.44□□□□□ -0.42
SMPD4-209ENST00000439886 RHBDL3P58872 404 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 POU5F1Q01860 360 aaKnown RBP12.44□□□□□ -0.42
SMPD4-209ENST00000439886 EDRF1Q3B7T1 1238 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 TMEM119Q4V9L6 283 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 SBK1Q52WX2 424 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 CEP128Q6ZU80 1094 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 CATSPER3Q86XQ3 398 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 HIPK4Q8NE63 616 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 ZNF564Q8TBZ8 553 aaPredicted RBP12.44□□□□□ -0.42
SMPD4-209ENST00000439886 PLVAPQ9BX97 442 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 CHST7Q9NS84 486 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 ITM2BQ9Y287 266 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 MYO3BQ8WXR4 1341 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 SCN11AQ9UI33 1791 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 GOLGA8IPA6NC78 632 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 FAM47DPA6NHR8 397 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 GOLGA8JA6NMD2 632 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 ZBTB39O15060 712 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 VIL1P09327 827 aaKnown RBP12.44□□□□□ -0.42
SMPD4-209ENST00000439886 FGRP09769 529 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 PLS3P13797 630 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 PIK3CAP42336 1068 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 PTGIRP43119 386 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 FMO5P49326 533 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 SPARCL1Q14515 664 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 CBWD6Q4V339 395 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 KHDC1Q4VXA5 237 aaKnown RBP12.44□□□□□ -0.42
SMPD4-209ENST00000439886 CBWD3Q5JTY5 395 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 CBWD5Q5RIA9 395 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 BTNL9Q6UXG8 535 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 SLFN11Q7Z7L1 901 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 FAM178BQ8IXR5 827 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 ADGRF4Q8IZF3 695 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 SERPINB12Q96P63 405 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 STK33Q9BYT3 514 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 TYW1Q9NV66 732 aaKnown RBP12.44□□□□□ -0.42
SMPD4-209ENST00000439886 NMRK1Q9NWW6 199 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 ZNF804BA4D1E1 1349 aa12.44□□□□□ -0.42
SMPD4-209ENST00000439886 O00370 1275 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 MAP3K7O43318 606 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 DCTN3O75935 186 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 LDHCP07864 332 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 HOXA13P31271 388 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-209ENST00000439886 GIT2Q14161 759 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 ARSHQ5FYA8 562 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 TRMT10CQ7L0Y3 403 aaKnown RBP12.43□□□□□ -0.42
SMPD4-209ENST00000439886 RHOT2Q8IXI1 618 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 OGFOD1Q8N543 542 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 UTP4Q969X6 686 aaKnown RBP12.43□□□□□ -0.42
SMPD4-209ENST00000439886 DHRS1Q96LJ7 313 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 MAGEB18Q96M61 343 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 TRABDQ9H4I3 376 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 KCNQ5Q9NR82 932 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 CHKBQ9Y259 395 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 RABGAP1Q9Y3P9 1069 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 LRP6O75581 1613 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 LAMB4A4D0S4 1761 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 CYP26A1O43174 497 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 GM2AP17900 193 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 TAC1P20366 129 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 MARK3P27448 753 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 KPNB1Q14974 876 aaKnown RBP12.43□□□□□ -0.42
SMPD4-209ENST00000439886 MTFR1Q15390 333 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 ODR4Q5SWX8 454 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 SDR16C5Q8N3Y7 309 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 SLC5A5Q92911 643 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 KAT5Q92993 513 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 FAM161BQ96MY7 647 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 CRAMP1Q96RY5 1269 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 ROPN1BQ9BZX4 212 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-209ENST00000439886 DNAJC18Q9H819 358 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 ROPN1Q9HAT0 212 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-209ENST00000439886 DIS3Q9Y2L1 958 aaKnown RBP12.43□□□□□ -0.42
SMPD4-209ENST00000439886 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-209ENST00000439886 BTNL10A8MVZ5 291 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 MIF4GDA9UHW6 222 aaKnown RBP12.43□□□□□ -0.42
SMPD4-209ENST00000439886 ZBED4O75132 1171 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 KRT38O76015 456 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 TTC4O95801 387 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 TROVE2P10155 538 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMPD4-209ENST00000439886 ATF7P17544 494 aaPredicted RBP12.43□□□□□ -0.42
SMPD4-209ENST00000439886 PRKCIP41743 596 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 COBLL1Q53SF7 1204 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 CCDC62Q6P9F0 684 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 CCDC125Q86Z20 511 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms