RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 CCDC195A0A1B0GUA6 201 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 TGM5O43548 720 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 SPATA31D3P0C874 917 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 RPL17P18621 184 aaKnown RBP22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 PROZP22891 400 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 GRM5P41594 1212 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 XKR4Q5GH76 650 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 PRSS55Q6UWB4 352 aaPredicted RBP22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 SPATA31D4Q6ZUB0 917 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 CCDC149Q6ZUS6 474 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 UBALD2Q8IYN6 164 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 FBXL6Q8N531 539 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 CEP120Q8N960 986 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 PIK3R5Q8WYR1 880 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 AK8Q96MA6 479 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 TTPALQ9BTX7 342 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 KCND2Q9NZV8 630 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 LIMD1Q9UGP4 676 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 C2orf16Q68DN1 1984 aa22.3■■□□□ 1.16
NCKIPSD-206ENST00000439518 TMEM189-UBE2V1I3L0A0 370 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 ABLIM1O14639 778 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 SLC16A4O15374 487 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 SLC26A4O43511 780 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 RFPL2O75678 378 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 BRD1O95696 1058 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 PLA2G4BP0C869 781 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 PLS3P13797 630 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 RAD51AP2Q09MP3 1159 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 MTMR3Q13615 1198 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 ZNF568Q3ZCX4 644 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 GLRA4Q5JXX5 417 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 FAM171A1Q5VUB5 890 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 ALKAL1Q6UXT8 129 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 OTOP3Q7RTS5 596 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 BRAPQ7Z569 592 aa22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 ZNF707Q96C28 371 aaPredicted RBP22.29■■□□□ 1.16
NCKIPSD-206ENST00000439518 SMIM28A0A1B0GU29 152 aa22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 ASGR2P07307 311 aa22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 MYBP10242 640 aa22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 MCF2P10911 925 aa22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 IGFBP6P24592 240 aaPredicted RBP22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 ELAVL2Q12926 359 aaKnown RBP22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 ARSHQ5FYA8 562 aa22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 GLYCTKQ8IVS8 523 aa22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 TMEM161BQ8NDZ6 487 aa22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 LNX1Q8TBB1 728 aaPredicted RBP22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 ACSF2Q96CM8 615 aaPredicted RBP22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 CDK5RAP3Q96JB5 506 aa22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 CLSTN3Q9BQT9 956 aa22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 CCDC94Q9BW85 323 aaPredicted RBP22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 KCNG1Q9UIX4 513 aa22.28■■□□□ 1.16
NCKIPSD-206ENST00000439518 BMP15O95972 392 aa22.27■■□□□ 1.16
NCKIPSD-206ENST00000439518 HOXD11P31277 338 aaPredicted RBP22.27■■□□□ 1.16
NCKIPSD-206ENST00000439518 DCLRE1AQ6PJP8 1040 aa22.27■■□□□ 1.16
NCKIPSD-206ENST00000439518 MPZL3Q6UWV2 235 aa22.27■■□□□ 1.16
NCKIPSD-206ENST00000439518 CD300LGQ6UXG3 332 aa22.27■■□□□ 1.16
NCKIPSD-206ENST00000439518 CEP57Q86XR8 500 aa22.27■■□□□ 1.16
NCKIPSD-206ENST00000439518 SUGP1Q8IWZ8 645 aaKnown RBP22.27■■□□□ 1.16
NCKIPSD-206ENST00000439518 UROC1Q96N76 676 aa22.27■■□□□ 1.16
NCKIPSD-206ENST00000439518 WDR6Q9NNW5 1121 aaKnown RBP22.27■■□□□ 1.16
NCKIPSD-206ENST00000439518 TOPORSQ9NS56 1045 aaPredicted RBP22.27■■□□□ 1.16
NCKIPSD-206ENST00000439518 ZDHHC7Q9NXF8 308 aa22.27■■□□□ 1.16
NCKIPSD-206ENST00000439518 TRIP11Q15643 1979 aa22.27■■□□□ 1.15
NCKIPSD-206ENST00000439518 N4BP1O75113 896 aaKnown RBP22.26■■□□□ 1.15
NCKIPSD-206ENST00000439518 B3GAT3O94766 335 aa22.26■■□□□ 1.15
NCKIPSD-206ENST00000439518 MAPTP10636 758 aaKnown RBP22.26■■□□□ 1.15
NCKIPSD-206ENST00000439518 YARSP54577 528 aaKnown RBP22.26■■□□□ 1.15
NCKIPSD-206ENST00000439518 OSTNP61366 133 aa22.26■■□□□ 1.15
NCKIPSD-206ENST00000439518 UPP1Q16831 310 aa22.26■■□□□ 1.15
NCKIPSD-206ENST00000439518 LRRC15Q8TF66 581 aa22.26■■□□□ 1.15
NCKIPSD-206ENST00000439518 SMG7Q92540 1137 aaKnown RBP22.26■■□□□ 1.15
NCKIPSD-206ENST00000439518 TCHPQ9BT92 498 aa22.26■■□□□ 1.15
NCKIPSD-206ENST00000439518 SMOC2Q9H3U7 446 aa22.26■■□□□ 1.15
NCKIPSD-206ENST00000439518 GOLGA2P5Q9HBQ8 144 aa22.26■■□□□ 1.15
NCKIPSD-206ENST00000439518 MTCL1Q9Y4B5 1905 aaKnown RBP22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 NPHP3-ACAD11A0A0J9YXS1 232 aa22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 FGFR3P22607 806 aa22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 UBA7P41226 1012 aa22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 CLCNKBP51801 687 aa22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 SMTNP53814 917 aa22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 SOX4Q06945 474 aaPredicted RBP22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 PSMD5Q16401 504 aa22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 IER5LQ5T953 404 aa22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 PDXDC1Q6P996 788 aa22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 KCNN1Q92952 543 aa22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 ZBTB45Q96K62 511 aaPredicted RBP22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 SNX27Q96L92 541 aa22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 ZMAT2Q96NC0 199 aaKnown RBP22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 PRKD2Q9BZL6 878 aa22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 CLUHO75153 1309 aa22.25■■□□□ 1.15
NCKIPSD-206ENST00000439518 CACNA1HO95180 2353 aa22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 VWA8A3KMH1 1905 aa22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 MEFVO15553 781 aaPredicted RBP22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 ADAM12O43184 909 aa22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 TOM1L1O75674 476 aa22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 ZMYND10O75800 440 aa22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 KCNE1P15382 129 aa22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 LONP1P36776 959 aaKnown RBP22.24■■□□□ 1.15
NCKIPSD-206ENST00000439518 GRIN1Q05586 938 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms