RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 SOX10P56693 466 aa16.46■□□□□ 0.22
APP-208ENST00000439274 IRX3P78415 501 aaPredicted RBP16.46■□□□□ 0.22
APP-208ENST00000439274 KRT39Q6A163 491 aa16.46■□□□□ 0.22
APP-208ENST00000439274 CPXCR1Q8N123 301 aa16.46■□□□□ 0.22
APP-208ENST00000439274 C12orf50Q8NA57 414 aaPredicted RBP16.46■□□□□ 0.22
APP-208ENST00000439274 TMEM39BQ9GZU3 492 aa16.46■□□□□ 0.22
APP-208ENST00000439274 LRRC19Q9H756 370 aa16.46■□□□□ 0.22
APP-208ENST00000439274 VEZTQ9HBM0 779 aa16.46■□□□□ 0.22
APP-208ENST00000439274 A1CFQ9NQ94 594 aaKnown RBP16.46■□□□□ 0.22
APP-208ENST00000439274 ABCF3Q9NUQ8 709 aa16.46■□□□□ 0.22
APP-208ENST00000439274 SPDYE2BA6NHP3 402 aa16.45■□□□□ 0.22
APP-208ENST00000439274 GRIN3BO60391 1043 aa16.45■□□□□ 0.22
APP-208ENST00000439274 DNAJC8O75937 253 aaPredicted RBP16.45■□□□□ 0.22
APP-208ENST00000439274 SPDYE6P0CI01 402 aa16.45■□□□□ 0.22
APP-208ENST00000439274 KRT5P13647 590 aa16.45■□□□□ 0.22
APP-208ENST00000439274 RDXP35241 583 aaKnown RBP16.45■□□□□ 0.22
APP-208ENST00000439274 CAP2P40123 477 aa16.45■□□□□ 0.22
APP-208ENST00000439274 TNIP1Q15025 636 aa16.45■□□□□ 0.22
APP-208ENST00000439274 FAM160B2Q86V87 743 aa16.45■□□□□ 0.22
APP-208ENST00000439274 CEP57Q86XR8 500 aa16.45■□□□□ 0.22
APP-208ENST00000439274 PARD3BQ8TEW8 1205 aa16.45■□□□□ 0.22
APP-208ENST00000439274 TMEM174Q8WUU8 243 aa16.45■□□□□ 0.22
APP-208ENST00000439274 P3H4Q92791 437 aa16.45■□□□□ 0.22
APP-208ENST00000439274 ZNF70Q9UC06 446 aaPredicted RBP16.45■□□□□ 0.22
APP-208ENST00000439274 ANAPC7Q9UJX3 599 aa16.45■□□□□ 0.22
APP-208ENST00000439274 LOXHD1Q8IVV2 1947 aa16.45■□□□□ 0.22
APP-208ENST00000439274 H0YIN7 160 aa16.45■□□□□ 0.22
APP-208ENST00000439274 EIF2AK2P19525 551 aaKnown RBP16.45■□□□□ 0.22
APP-208ENST00000439274 MAP2K2P36507 400 aa16.45■□□□□ 0.22
APP-208ENST00000439274 VPS41P49754 854 aa16.45■□□□□ 0.22
APP-208ENST00000439274 NCKAP1LP55160 1127 aa16.45■□□□□ 0.22
APP-208ENST00000439274 GSCP56915 257 aaPredicted RBP16.45■□□□□ 0.22
APP-208ENST00000439274 DGKZQ13574 1117 aa16.45■□□□□ 0.22
APP-208ENST00000439274 MTMR1Q13613 665 aa16.45■□□□□ 0.22
APP-208ENST00000439274 ITIH4Q14624 930 aa16.45■□□□□ 0.22
APP-208ENST00000439274 ZNF568Q3ZCX4 644 aa16.45■□□□□ 0.22
APP-208ENST00000439274 ACAD10Q6JQN1 1059 aa16.45■□□□□ 0.22
APP-208ENST00000439274 TAX1BP1Q86VP1 789 aa16.45■□□□□ 0.22
APP-208ENST00000439274 TEX2Q8IWB9 1127 aa16.45■□□□□ 0.22
APP-208ENST00000439274 CLEC4DQ8WXI8 215 aa16.45■□□□□ 0.22
APP-208ENST00000439274 FAM118BQ9BPY3 351 aa16.45■□□□□ 0.22
APP-208ENST00000439274 UVRAGQ9P2Y5 699 aa16.45■□□□□ 0.22
APP-208ENST00000439274 FEM1BQ9UK73 627 aa16.45■□□□□ 0.22
APP-208ENST00000439274 TBX20Q9UMR3 447 aa16.45■□□□□ 0.22
APP-208ENST00000439274 CNTNAP1P78357 1384 aa16.44■□□□□ 0.22
APP-208ENST00000439274 ATP9AO75110 1047 aa16.44■□□□□ 0.22
APP-208ENST00000439274 XKR9Q5GH70 373 aa16.44■□□□□ 0.22
APP-208ENST00000439274 HIBCHQ6NVY1 386 aaPredicted RBP16.44■□□□□ 0.22
APP-208ENST00000439274 ARHGEF2Q92974 986 aaKnown RBP16.44■□□□□ 0.22
APP-208ENST00000439274 RUNDC3BQ96NL0 473 aa16.44■□□□□ 0.22
APP-208ENST00000439274 NT5C1BQ96P26 610 aa16.44■□□□□ 0.22
APP-208ENST00000439274 CCDC134Q9H6E4 229 aa16.44■□□□□ 0.22
APP-208ENST00000439274 SCAF8Q9UPN6 1271 aaKnown RBP16.44■□□□□ 0.22
APP-208ENST00000439274 COL2A1P02458 1487 aaPredicted RBP16.44■□□□□ 0.22
APP-208ENST00000439274 FSCN2O14926 492 aa16.44■□□□□ 0.22
APP-208ENST00000439274 MAPK13O15264 365 aa16.44■□□□□ 0.22
APP-208ENST00000439274 ICAM1P05362 532 aa16.44■□□□□ 0.22
APP-208ENST00000439274 CNGA1P29973 690 aa16.44■□□□□ 0.22
APP-208ENST00000439274 MAPK4P31152 587 aa16.44■□□□□ 0.22
APP-208ENST00000439274 ELF3P78545 371 aaPredicted RBP16.44■□□□□ 0.22
APP-208ENST00000439274 E2F5Q15329 346 aa16.44■□□□□ 0.22
APP-208ENST00000439274 MFSD5Q6N075 450 aa16.44■□□□□ 0.22
APP-208ENST00000439274 TAOK1Q7L7X3 1001 aa16.44■□□□□ 0.22
APP-208ENST00000439274 ANKRD42Q8N9B4 389 aa16.44■□□□□ 0.22
APP-208ENST00000439274 TMEM161BQ8NDZ6 487 aa16.44■□□□□ 0.22
APP-208ENST00000439274 FAM151AQ8WW52 585 aa16.44■□□□□ 0.22
APP-208ENST00000439274 DYDC1Q8WWB3 177 aa16.44■□□□□ 0.22
APP-208ENST00000439274 STMN4Q9H169 189 aaPredicted RBP16.44■□□□□ 0.22
APP-208ENST00000439274 TMEM8AQ9HCN3 771 aa16.44■□□□□ 0.22
APP-208ENST00000439274 RAB20Q9NX57 234 aa16.44■□□□□ 0.22
APP-208ENST00000439274 SLC12A4Q9UP95 1085 aa16.44■□□□□ 0.22
APP-208ENST00000439274 R3HDM2Q9Y2K5 976 aaKnown RBP16.44■□□□□ 0.22
APP-208ENST00000439274 USP20Q9Y2K6 914 aa16.44■□□□□ 0.22
APP-208ENST00000439274 UBIAD1Q9Y5Z9 338 aa16.44■□□□□ 0.22
APP-208ENST00000439274 TMEM120BA0PK00 339 aa16.43■□□□□ 0.22
APP-208ENST00000439274 TCP11X1B4DZS4 312 aa16.43■□□□□ 0.22
APP-208ENST00000439274 O00370 1275 aa16.43■□□□□ 0.22
APP-208ENST00000439274 PTGER2P43116 358 aa16.43■□□□□ 0.22
APP-208ENST00000439274 NPTX2P47972 431 aa16.43■□□□□ 0.22
APP-208ENST00000439274 GPC3P51654 580 aa16.43■□□□□ 0.22
APP-208ENST00000439274 KYNUQ16719 465 aa16.43■□□□□ 0.22
APP-208ENST00000439274 CLEC16AQ2KHT3 1053 aa16.43■□□□□ 0.22
APP-208ENST00000439274 SLC39A4Q6P5W5 647 aa16.43■□□□□ 0.22
APP-208ENST00000439274 RHBDF2Q6PJF5 856 aa16.43■□□□□ 0.22
APP-208ENST00000439274 TRMT10CQ7L0Y3 403 aaKnown RBP16.43■□□□□ 0.22
APP-208ENST00000439274 TRPM8Q7Z2W7 1104 aa16.43■□□□□ 0.22
APP-208ENST00000439274 CROCCP2Q86T23 111 aa16.43■□□□□ 0.22
APP-208ENST00000439274 FBXL13Q8NEE6 735 aa16.43■□□□□ 0.22
APP-208ENST00000439274 CPA5Q8WXQ8 436 aa16.43■□□□□ 0.22
APP-208ENST00000439274 BSNDQ8WZ55 320 aa16.43■□□□□ 0.22
APP-208ENST00000439274 MYCBPQ99417 103 aaPredicted RBP16.43■□□□□ 0.22
APP-208ENST00000439274 ST6GALNAC4Q9H4F1 302 aa16.43■□□□□ 0.22
APP-208ENST00000439274 FGFR1OP2Q9NVK5 253 aa16.43■□□□□ 0.22
APP-208ENST00000439274 AGAP1Q9UPQ3 857 aa16.43■□□□□ 0.22
APP-208ENST00000439274 SRCAPQ6ZRS2 3230 aa16.43■□□□□ 0.22
APP-208ENST00000439274 DENND3A2RUS2 1198 aa16.43■□□□□ 0.22
APP-208ENST00000439274 PMM2O15305 246 aa16.43■□□□□ 0.22
APP-208ENST00000439274 RAD17O75943 681 aa16.43■□□□□ 0.22
APP-208ENST00000439274 CCNE2O96020 404 aa16.43■□□□□ 0.22
APP-208ENST00000439274 MYCLP12524 364 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms