RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 XKR3Q5GH77 459 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 UBXN11Q5T124 520 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 TTC22Q5TAA0 569 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 CEP68Q76N32 757 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 SPEM1Q8N4L4 309 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 FAM3CQ92520 227 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 IRF7Q92985 503 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 JPH2Q9BR39 696 aaPredicted RBP12.47□□□□□ -0.41
CSTF3-203ENST00000438862 PLA2G2FQ9BZM2 168 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 IL25Q9H293 177 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 BRD9Q9H8M2 597 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 IFT122Q9HBG6 1241 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 TRPV5Q9NQA5 729 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 ADAM28Q9UKQ2 775 aa12.47□□□□□ -0.41
CSTF3-203ENST00000438862 TADA2AO75478 443 aa12.46□□□□□ -0.41
CSTF3-203ENST00000438862 HOXA11P31270 313 aaPredicted RBP12.46□□□□□ -0.41
CSTF3-203ENST00000438862 JAK3P52333 1124 aa12.46□□□□□ -0.41
CSTF3-203ENST00000438862 RING1Q06587 406 aa12.46□□□□□ -0.41
CSTF3-203ENST00000438862 SF3A2Q15428 464 aaKnown RBP12.46□□□□□ -0.41
CSTF3-203ENST00000438862 MTERF2Q49AM1 385 aa12.46□□□□□ -0.41
CSTF3-203ENST00000438862 SRGAP1Q7Z6B7 1085 aa12.46□□□□□ -0.41
CSTF3-203ENST00000438862 SMG8Q8ND04 991 aaKnown RBP12.46□□□□□ -0.41
CSTF3-203ENST00000438862 MCRS1Q96EZ8 462 aa12.46□□□□□ -0.41
CSTF3-203ENST00000438862 NLRP4Q96MN2 994 aa12.46□□□□□ -0.41
CSTF3-203ENST00000438862 CEP89Q96ST8 783 aa12.46□□□□□ -0.41
CSTF3-203ENST00000438862 GAD1Q99259 594 aa12.46□□□□□ -0.41
CSTF3-203ENST00000438862 ARRDC1-AS1Q9H2J1 176 aa12.46□□□□□ -0.41
CSTF3-203ENST00000438862 RXFP3Q9NSD7 469 aa12.46□□□□□ -0.41
CSTF3-203ENST00000438862 DNMT3BQ9UBC3 853 aaKnown RBP12.46□□□□□ -0.41
CSTF3-203ENST00000438862 MRPS23Q9Y3D9 190 aaKnown RBP12.46□□□□□ -0.41
CSTF3-203ENST00000438862 SLC12A7Q9Y666 1083 aa12.46□□□□□ -0.41
CSTF3-203ENST00000438862 TAF6LQ9Y6J9 622 aa12.46□□□□□ -0.41
CSTF3-203ENST00000438862 F5P12259 2224 aa12.46□□□□□ -0.42
CSTF3-203ENST00000438862 NOTCH4Q99466 2003 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 F8W810 466 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 SH2B2O14492 632 aaPredicted RBP12.45□□□□□ -0.42
CSTF3-203ENST00000438862 AXIN1O15169 862 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 PRC1O43663 620 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 CHRNB1P11230 501 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 HOXA6P31267 233 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 MCM5P33992 734 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 MLLT6P55198 1093 aaPredicted RBP12.45□□□□□ -0.42
CSTF3-203ENST00000438862 PTH1RQ03431 593 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 SRSF5Q13243 272 aaKnown RBP12.45□□□□□ -0.42
CSTF3-203ENST00000438862 LAPTM4AQ15012 233 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 UGCGQ16739 394 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 PRR16Q569H4 304 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 JAKMIP3Q5VZ66 844 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 TANGO2Q6ICL3 276 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 PSAPL1Q6NUJ1 521 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 PRSS55Q6UWB4 352 aaPredicted RBP12.45□□□□□ -0.42
CSTF3-203ENST00000438862 KSR1Q8IVT5 923 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 RUFY2Q8WXA3 655 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 ZNF516Q92618 1163 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 RIT2Q99578 217 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 CLSTN3Q9BQT9 956 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 TRMT61BQ9BVS5 477 aaKnown RBP12.45□□□□□ -0.42
CSTF3-203ENST00000438862 IL21Q9HBE4 155 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 MIOSQ9NXC5 875 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 BARHL2Q9NY43 387 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 IPPQ9Y573 584 aa12.45□□□□□ -0.42
CSTF3-203ENST00000438862 SETXQ7Z333 2677 aaKnown RBP12.44□□□□□ -0.42
CSTF3-203ENST00000438862 K7ESF4 209 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 CIITAP33076 1130 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 MLH1P40692 756 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 SCNN1GP51170 649 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 LRRC32Q14392 662 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 PCBP1Q15365 356 aaKnown RBP eCLIP12.44□□□□□ -0.42
CSTF3-203ENST00000438862 AXDND1Q5T1B0 1012 aaPredicted RBP12.44□□□□□ -0.42
CSTF3-203ENST00000438862 PDXDC1Q6P996 788 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 C1orf228Q6PIY5 440 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 NUDT18Q6ZVK8 323 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 EXOC8Q8IYI6 725 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 RDM1Q8NG50 284 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 SLC7A14Q8TBB6 771 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 ING5Q8WYH8 240 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 PIK3R5Q8WYR1 880 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 ZFP14Q9HCL3 533 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 ZNF334Q9HCZ1 680 aaPredicted RBP12.44□□□□□ -0.42
CSTF3-203ENST00000438862 AVENQ9NQS1 362 aaPredicted RBP12.44□□□□□ -0.42
CSTF3-203ENST00000438862 RBM28Q9NW13 759 aaKnown RBP12.44□□□□□ -0.42
CSTF3-203ENST00000438862 HCFC1R1Q9NWW0 138 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 WASF3Q9UPY6 502 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 GIT1Q9Y2X7 761 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 COL4A3BPQ9Y5P4 624 aa12.44□□□□□ -0.42
CSTF3-203ENST00000438862 SF3B1O75533 1304 aaKnown RBP eCLIP12.43□□□□□ -0.427e-8■■■■■ 37.5
CSTF3-203ENST00000438862 TAF4O00268 1085 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 GAS7O60861 476 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 EPN2O95208 641 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 GSPT1P15170 499 aaKnown RBP12.43□□□□□ -0.42
CSTF3-203ENST00000438862 AXLP30530 894 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 NCBP1Q09161 790 aaKnown RBP12.43□□□□□ -0.42
CSTF3-203ENST00000438862 FOXC1Q12948 553 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 PTGDRQ13258 359 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 GAS6Q14393 721 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 PSMD5Q16401 504 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 RTP2Q5QGT7 225 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 PLA2G2CQ5R387 149 aa12.43□□□□□ -0.42
CSTF3-203ENST00000438862 RNF43Q68DV7 783 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms