RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 DNM1Q05193 864 aaKnown RBP27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 SMAD2Q15796 467 aaKnown RBP27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 KIAA1841Q6NSI8 718 aa27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 LLGL2Q6P1M3 1020 aa27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 FUT10Q6P4F1 479 aa27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 RNF168Q8IYW5 571 aaPredicted RBP27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 ZBTB45Q96K62 511 aaPredicted RBP27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 FIZ1Q96SL8 496 aa27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 LRRC27Q9C0I9 530 aa27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 ST6GALNAC4Q9H4F1 302 aa27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 SLC38A7Q9NVC3 462 aa27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 PRKAG3Q9UGI9 489 aa27.05■■□□□ 1.92
RAPGEF1-206ENST00000438647 EFEMP2O95967 443 aa27.04■■□□□ 1.92
RAPGEF1-206ENST00000438647 PIGRP01833 764 aa27.04■■□□□ 1.92
RAPGEF1-206ENST00000438647 GLUD2P49448 558 aa27.04■■□□□ 1.92
RAPGEF1-206ENST00000438647 RBM10P98175 930 aaKnown RBP27.04■■□□□ 1.92
RAPGEF1-206ENST00000438647 NAB2Q15742 525 aa27.04■■□□□ 1.92
RAPGEF1-206ENST00000438647 KYAT1Q16773 422 aa27.04■■□□□ 1.92
RAPGEF1-206ENST00000438647 XKR4Q5GH76 650 aa27.04■■□□□ 1.92
RAPGEF1-206ENST00000438647 GLRA4Q5JXX5 417 aa27.04■■□□□ 1.92
RAPGEF1-206ENST00000438647 UROC1Q96N76 676 aa27.04■■□□□ 1.92
RAPGEF1-206ENST00000438647 PPP1R10Q96QC0 940 aaKnown RBP27.04■■□□□ 1.92
RAPGEF1-206ENST00000438647 TNMDQ9H2S6 317 aa27.04■■□□□ 1.92
RAPGEF1-206ENST00000438647 SF3B1O75533 1304 aaKnown RBP eCLIP27.04■■□□□ 1.926e-9■■■■■ 166.6
RAPGEF1-206ENST00000438647 NMT1P30419 496 aaKnown RBP27.03■■□□□ 1.92
RAPGEF1-206ENST00000438647 USP41Q3LFD5 358 aa27.03■■□□□ 1.92
RAPGEF1-206ENST00000438647 AXDND1Q5T1B0 1012 aaPredicted RBP27.03■■□□□ 1.92
RAPGEF1-206ENST00000438647 ANKRD54Q6NXT1 300 aa27.03■■□□□ 1.92
RAPGEF1-206ENST00000438647 SHC4Q6S5L8 630 aa27.03■■□□□ 1.92
RAPGEF1-206ENST00000438647 ALKAL1Q6UXT8 129 aa27.03■■□□□ 1.92
RAPGEF1-206ENST00000438647 SFR1Q86XK3 245 aa27.03■■□□□ 1.92
RAPGEF1-206ENST00000438647 MAP4K3Q8IVH8 894 aa27.03■■□□□ 1.92
RAPGEF1-206ENST00000438647 IQUBQ8NA54 791 aa27.03■■□□□ 1.92
RAPGEF1-206ENST00000438647 HVCN1Q96D96 273 aa27.03■■□□□ 1.92
RAPGEF1-206ENST00000438647 DNAJC19Q96DA6 116 aa27.03■■□□□ 1.92
RAPGEF1-206ENST00000438647 SNX27Q96L92 541 aa27.03■■□□□ 1.92
RAPGEF1-206ENST00000438647 CXCL16Q9H2A7 254 aa27.03■■□□□ 1.92
RAPGEF1-206ENST00000438647 ATP6V1DQ9Y5K8 247 aa27.03■■□□□ 1.92
RAPGEF1-206ENST00000438647 SMIM28A0A1B0GU29 152 aa27.02■■□□□ 1.92
RAPGEF1-206ENST00000438647 F8W810 466 aa27.02■■□□□ 1.92
RAPGEF1-206ENST00000438647 LILRB3O75022 631 aa27.02■■□□□ 1.92
RAPGEF1-206ENST00000438647 DSG1Q02413 1049 aa27.02■■□□□ 1.92
RAPGEF1-206ENST00000438647 TPRNQ4KMQ1 711 aa27.02■■□□□ 1.92
RAPGEF1-206ENST00000438647 GPR65Q8IYL9 337 aa27.02■■□□□ 1.92
RAPGEF1-206ENST00000438647 PAAF1Q9BRP4 392 aa27.02■■□□□ 1.92
RAPGEF1-206ENST00000438647 MRPL44Q9H9J2 332 aaKnown RBP27.02■■□□□ 1.92
RAPGEF1-206ENST00000438647 CHST7Q9NS84 486 aa27.02■■□□□ 1.92
RAPGEF1-206ENST00000438647 DZANK1Q9NVP4 752 aa27.02■■□□□ 1.92
RAPGEF1-206ENST00000438647 FAM13BQ9NYF5 915 aa27.02■■□□□ 1.92
RAPGEF1-206ENST00000438647 CNTN3Q9P232 1028 aa27.02■■□□□ 1.92
RAPGEF1-206ENST00000438647 RCOR1Q9UKL0 485 aa27.02■■□□□ 1.92
RAPGEF1-206ENST00000438647 PCDHA7Q9UN72 937 aa27.02■■□□□ 1.92
RAPGEF1-206ENST00000438647 C2CD2LO14523 706 aa27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 KIF4AO95239 1232 aa27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 CLTAP09496 248 aa27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 IDEP14735 1019 aa27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 KCNE1P15382 129 aa27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 KLRC2P26717 231 aa27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 AMPD3Q01432 767 aa27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 ELAVL2Q12926 359 aaKnown RBP27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 E2F4Q16254 413 aa27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 TAS1R1Q7RTX1 841 aa27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 ZNF720Q7Z2F6 126 aa27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 RABGGTAQ92696 567 aa27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 KLHL5Q96PQ7 755 aa27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 POP1Q99575 1024 aaKnown RBP27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 GPR62Q9BZJ7 368 aa27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 CACNG4Q9UBN1 327 aa27.01■■□□□ 1.91
RAPGEF1-206ENST00000438647 TMEM189-UBE2V1I3L0A0 370 aa27■■□□□ 1.91
RAPGEF1-206ENST00000438647 ADH1AP07327 375 aa27■■□□□ 1.91
RAPGEF1-206ENST00000438647 CNPP09543 421 aaKnown RBP27■■□□□ 1.91
RAPGEF1-206ENST00000438647 KRT85P78386 507 aa27■■□□□ 1.91
RAPGEF1-206ENST00000438647 CREMQ03060 361 aa27■■□□□ 1.91
RAPGEF1-206ENST00000438647 KIAA0319Q5VV43 1072 aa27■■□□□ 1.91
RAPGEF1-206ENST00000438647 ADHFE1Q8IWW8 467 aa27■■□□□ 1.91
RAPGEF1-206ENST00000438647 DHX58Q96C10 678 aa27■■□□□ 1.91
RAPGEF1-206ENST00000438647 DDX27Q96GQ7 796 aaKnown RBP27■■□□□ 1.91
RAPGEF1-206ENST00000438647 PYM1Q9BRP8 204 aaKnown RBP27■■□□□ 1.91
RAPGEF1-206ENST00000438647 MAGEF1Q9HAY2 307 aa27■■□□□ 1.91
RAPGEF1-206ENST00000438647 OLFML3Q9NRN5 406 aa27■■□□□ 1.91
RAPGEF1-206ENST00000438647 USP15Q9Y4E8 981 aaPredicted RBP27■■□□□ 1.91
RAPGEF1-206ENST00000438647 FRMD3A2A2Y4 597 aa26.99■■□□□ 1.91
RAPGEF1-206ENST00000438647 ZC2HC1CQ53FD0 456 aaPredicted RBP26.99■■□□□ 1.91
RAPGEF1-206ENST00000438647 HERC4Q5GLZ8 1057 aaPredicted RBP26.99■■□□□ 1.91
RAPGEF1-206ENST00000438647 DCLRE1AQ6PJP8 1040 aa26.99■■□□□ 1.91
RAPGEF1-206ENST00000438647 CCDC65Q8IXS2 484 aa26.99■■□□□ 1.91
RAPGEF1-206ENST00000438647 GJD3Q8N144 294 aa26.99■■□□□ 1.91
RAPGEF1-206ENST00000438647 HASPINQ8TF76 798 aa26.99■■□□□ 1.91
RAPGEF1-206ENST00000438647 PLEKHA5Q9HAU0 1116 aa26.99■■□□□ 1.91
RAPGEF1-206ENST00000438647 KBTBD4Q9NVX7 518 aa26.99■■□□□ 1.91
RAPGEF1-206ENST00000438647 ZDHHC9Q9Y397 364 aa26.99■■□□□ 1.91
RAPGEF1-206ENST00000438647 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.99■■□□□ 1.91
RAPGEF1-206ENST00000438647 OGTO15294 1046 aa26.98■■□□□ 1.91
RAPGEF1-206ENST00000438647 B3GAT3O94766 335 aa26.98■■□□□ 1.91
RAPGEF1-206ENST00000438647 SSTR3P32745 418 aaPredicted RBP26.98■■□□□ 1.91
RAPGEF1-206ENST00000438647 ZP2Q05996 745 aa26.98■■□□□ 1.91
RAPGEF1-206ENST00000438647 ALCAMQ13740 583 aa26.98■■□□□ 1.91
RAPGEF1-206ENST00000438647 SLC10A6Q3KNW5 377 aa26.98■■□□□ 1.91
RAPGEF1-206ENST00000438647 SEZ6Q53EL9 994 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms