RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 DEFB103AP81534 67 aa19.99■□□□□ 0.79
HDAC6-208ENST00000438518 ENOX2Q16206 610 aaKnown RBP19.99■□□□□ 0.79
HDAC6-208ENST00000438518 FRMD5Q7Z6J6 570 aa19.99■□□□□ 0.79
HDAC6-208ENST00000438518 CBWD2Q8IUF1 395 aa19.99■□□□□ 0.79
HDAC6-208ENST00000438518 RNF169Q8NCN4 708 aa19.99■□□□□ 0.79
HDAC6-208ENST00000438518 URGCPQ8TCY9 931 aa19.99■□□□□ 0.79
HDAC6-208ENST00000438518 MFSD14AQ96MC6 490 aa19.99■□□□□ 0.79
HDAC6-208ENST00000438518 MED15Q96RN5 788 aa19.99■□□□□ 0.79
HDAC6-208ENST00000438518 APOL6Q9BWW8 343 aa19.99■□□□□ 0.79
HDAC6-208ENST00000438518 SRRTQ9BXP5 876 aaKnown RBP19.99■□□□□ 0.79
HDAC6-208ENST00000438518 TMEM117Q9H0C3 514 aa19.99■□□□□ 0.79
HDAC6-208ENST00000438518 C2CD2Q9Y426 696 aa19.99■□□□□ 0.79
HDAC6-208ENST00000438518 NFE2L3Q9Y4A8 694 aa19.99■□□□□ 0.79
HDAC6-208ENST00000438518 CARNS1A5YM72 827 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 GOLGA8IPA6NC78 632 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 GOLGA8JA6NMD2 632 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 GJB5O95377 273 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 CXCL8P10145 99 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 KCNE1P15382 129 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 AKAP5P24588 427 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 AP3M2P53677 418 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 TPM4P67936 248 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 CYP24A1Q07973 514 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 PSMD6Q15008 389 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 SLC10A6Q3KNW5 377 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 SEZ6Q53EL9 994 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 ZBTB41Q5SVQ8 909 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 ALKAL1Q6UXT8 129 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 TMC2Q8TDI7 906 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 FNBP1Q96RU3 617 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 RNF39Q9H2S5 420 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 SLC38A7Q9NVC3 462 aa19.98■□□□□ 0.79
HDAC6-208ENST00000438518 CXXC1Q9P0U4 656 aaPredicted RBP19.98■□□□□ 0.79
HDAC6-208ENST00000438518 ARL5CA6NH57 179 aa19.97■□□□□ 0.79
HDAC6-208ENST00000438518 OFD1O75665 1012 aa19.97■□□□□ 0.79
HDAC6-208ENST00000438518 ATP2A2P16615 1042 aaKnown RBP19.97■□□□□ 0.79
HDAC6-208ENST00000438518 MLH1P40692 756 aa19.97■□□□□ 0.79
HDAC6-208ENST00000438518 CASP4P49662 377 aa19.97■□□□□ 0.79
HDAC6-208ENST00000438518 SPAG1Q07617 926 aa19.97■□□□□ 0.79
HDAC6-208ENST00000438518 BFSP1Q12934 665 aa19.97■□□□□ 0.79
HDAC6-208ENST00000438518 GRIK3Q13003 919 aa19.97■□□□□ 0.79
HDAC6-208ENST00000438518 SHHQ15465 462 aa19.97■□□□□ 0.79
HDAC6-208ENST00000438518 CCDC40Q4G0X9 1142 aa19.97■□□□□ 0.79
HDAC6-208ENST00000438518 WDR49Q8IV35 697 aa19.97■□□□□ 0.79
HDAC6-208ENST00000438518 TMEM192Q8IY95 271 aa19.97■□□□□ 0.79
HDAC6-208ENST00000438518 RDH13Q8NBN7 331 aa19.97■□□□□ 0.79
HDAC6-208ENST00000438518 LPPQ93052 612 aa19.97■□□□□ 0.79
HDAC6-208ENST00000438518 ZNF689Q96CS4 500 aaPredicted RBP19.97■□□□□ 0.79
HDAC6-208ENST00000438518 MAGEC2Q9UBF1 373 aaPredicted RBP19.97■□□□□ 0.79
HDAC6-208ENST00000438518 ARMCX3Q9UH62 379 aaPredicted RBP19.97■□□□□ 0.79
HDAC6-208ENST00000438518 A0A1W2PPC1 479 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 STX10O60499 249 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 UPP2O95045 317 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 EEF1GP26641 437 aaKnown RBP19.96■□□□□ 0.79
HDAC6-208ENST00000438518 CLDN10P78369 228 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 HTRA4P83105 476 aaPredicted RBP19.96■□□□□ 0.79
HDAC6-208ENST00000438518 NOMO2Q5JPE7 1267 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 CLLU1OSQ5K130 101 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 C9orf50Q5SZB4 431 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 HERC6Q8IVU3 1022 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 CMTR2Q8IYT2 770 aaKnown RBP19.96■□□□□ 0.79
HDAC6-208ENST00000438518 TDHQ8IZJ6 230 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 LRRC43Q8N309 656 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 AOPEPQ8N6M6 819 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 ZSWIM2Q8NEG5 633 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 PARD3BQ8TEW8 1205 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 GAD1Q99259 594 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 RC3H2Q9HBD1 1191 aaKnown RBP19.96■□□□□ 0.79
HDAC6-208ENST00000438518 RNF19AQ9NV58 838 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 PCDH10Q9P2E7 1040 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 INSL6Q9Y581 213 aa19.96■□□□□ 0.79
HDAC6-208ENST00000438518 TRIP11Q15643 1979 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 MEIS3P2A8K0S8 358 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 LACTBL1A8MY62 500 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 GOLGA6L19H0YKK7 550 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 THP07101 528 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 CYP3A5P20815 502 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 VAMP7P51809 220 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 NCAPHQ15003 741 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 IQCB1Q15051 598 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 DHX40Q8IX18 779 aaKnown RBP19.95■□□□□ 0.78
HDAC6-208ENST00000438518 ANKRD20A12PQ8NF67 263 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 HELQQ8TDG4 1101 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 CACTINQ8WUQ7 758 aaKnown RBP19.95■□□□□ 0.78
HDAC6-208ENST00000438518 BORCS6Q96GS4 357 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 CNOT6LQ96LI5 555 aaKnown RBP19.95■□□□□ 0.78
HDAC6-208ENST00000438518 CASD1Q96PB1 797 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 CGRRF1Q99675 332 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 CBX8Q9HC52 389 aa19.95■□□□□ 0.78
HDAC6-208ENST00000438518 UBQLN1Q9UMX0 589 aaKnown RBP19.95■□□□□ 0.78
HDAC6-208ENST00000438518 SMIM28A0A1B0GU29 152 aa19.94■□□□□ 0.78
HDAC6-208ENST00000438518 FGFR1P11362 822 aa19.94■□□□□ 0.78
HDAC6-208ENST00000438518 IBSPP21815 317 aaPredicted RBP19.94■□□□□ 0.78
HDAC6-208ENST00000438518 GTF2H1P32780 548 aa19.94■□□□□ 0.78
HDAC6-208ENST00000438518 TMEM132DQ14C87 1099 aa19.94■□□□□ 0.78
HDAC6-208ENST00000438518 CDKAL1Q5VV42 579 aa19.94■□□□□ 0.78
HDAC6-208ENST00000438518 GSTCDQ8NEC7 633 aa19.94■□□□□ 0.78
HDAC6-208ENST00000438518 FAM212AQ96EL1 285 aa19.94■□□□□ 0.78
HDAC6-208ENST00000438518 EEF2KMTQ96G04 330 aa19.94■□□□□ 0.78
HDAC6-208ENST00000438518 ZFP42Q96MM3 310 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms