RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 AGO2Q9UKV8 859 aaKnown RBP17.86■□□□□ 0.45
CTSD-205ENST00000438213 KIAA1671Q9BY89 1806 aa17.86■□□□□ 0.45
CTSD-205ENST00000438213 FSCN2O14926 492 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 EIF3DO15371 548 aaKnown RBP eCLIP17.85■□□□□ 0.45
CTSD-205ENST00000438213 TADA2AO75478 443 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 PRPF6O94906 941 aaKnown RBP17.85■□□□□ 0.45
CTSD-205ENST00000438213 CXCL14O95715 111 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 KCNE1P15382 129 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 IRS1P35568 1242 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 CASP5P51878 434 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 KCNA1Q09470 495 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 PSMD2Q13200 908 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 SMC1AQ14683 1233 aaKnown RBP17.85■□□□□ 0.45
CTSD-205ENST00000438213 SLC10A6Q3KNW5 377 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 SEZ6Q53EL9 994 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 SLC39A4Q6P5W5 647 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 CD302Q8IX05 232 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 TMEM87AQ8NBN3 555 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 DDX27Q96GQ7 796 aaKnown RBP17.85■□□□□ 0.45
CTSD-205ENST00000438213 SNX27Q96L92 541 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 UROC1Q96N76 676 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 PPP1R10Q96QC0 940 aaKnown RBP17.85■□□□□ 0.45
CTSD-205ENST00000438213 TSPAN18Q96SJ8 248 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 TLE6Q9H808 572 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 EXOC1Q9NV70 894 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 CNTN3Q9P232 1028 aa17.85■□□□□ 0.45
CTSD-205ENST00000438213 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.85■□□□□ 0.45
CTSD-205ENST00000438213 COL4A4P53420 1690 aaPredicted RBP17.84■□□□□ 0.45
CTSD-205ENST00000438213 FSD2A1L4K1 749 aa17.84■□□□□ 0.45
CTSD-205ENST00000438213 LDHAP00338 332 aaKnown RBP17.84■□□□□ 0.45
CTSD-205ENST00000438213 GARTP22102 1010 aa17.84■□□□□ 0.45
CTSD-205ENST00000438213 POU5F1Q01860 360 aaKnown RBP17.84■□□□□ 0.45
CTSD-205ENST00000438213 EHHADHQ08426 723 aa17.84■□□□□ 0.45
CTSD-205ENST00000438213 HSP90AA2PQ14568 343 aaPredicted RBP17.84■□□□□ 0.45
CTSD-205ENST00000438213 AAK1Q2M2I8 961 aa17.84■□□□□ 0.45
CTSD-205ENST00000438213 GLRA4Q5JXX5 417 aa17.84■□□□□ 0.45
CTSD-205ENST00000438213 PLPP4Q5VZY2 271 aa17.84■□□□□ 0.45
CTSD-205ENST00000438213 DCLRE1AQ6PJP8 1040 aa17.84■□□□□ 0.45
CTSD-205ENST00000438213 TMEM173Q86WV6 379 aaPredicted RBP17.84■□□□□ 0.45
CTSD-205ENST00000438213 MRPL43Q8N983 215 aaKnown RBP17.84■□□□□ 0.45
CTSD-205ENST00000438213 ZNF507Q8TCN5 953 aa17.84■□□□□ 0.45
CTSD-205ENST00000438213 HPS3Q969F9 1004 aa17.84■□□□□ 0.45
CTSD-205ENST00000438213 CDCA3Q99618 268 aaPredicted RBP17.84■□□□□ 0.45
CTSD-205ENST00000438213 CXCL16Q9H2A7 254 aa17.84■□□□□ 0.45
CTSD-205ENST00000438213 IGFLR1Q9H665 355 aa17.84■□□□□ 0.45
CTSD-205ENST00000438213 THEGQ9P2T0 379 aa17.84■□□□□ 0.45
CTSD-205ENST00000438213 SSX2IPQ9Y2D8 614 aa17.84■□□□□ 0.45
CTSD-205ENST00000438213 TDRD15B5MCY1 1934 aaKnown RBP17.83■□□□□ 0.44
CTSD-205ENST00000438213 TTC26A0AVF1 554 aa17.83■□□□□ 0.44
CTSD-205ENST00000438213 CASTOR2A6NHX0 329 aa17.83■□□□□ 0.44
CTSD-205ENST00000438213 CTSAP10619 480 aa17.83■□□□□ 0.44
CTSD-205ENST00000438213 CA8P35219 290 aa17.83■□□□□ 0.44
CTSD-205ENST00000438213 PPP2R3AQ06190 1150 aa17.83■□□□□ 0.44
CTSD-205ENST00000438213 NAB2Q15742 525 aa17.83■□□□□ 0.44
CTSD-205ENST00000438213 FMR1NBQ8N0W7 255 aaPredicted RBP17.83■□□□□ 0.44
CTSD-205ENST00000438213 BCL7CQ8WUZ0 217 aaPredicted RBP17.83■□□□□ 0.44
CTSD-205ENST00000438213 FGFBP2Q9BYJ0 223 aa17.83■□□□□ 0.44
CTSD-205ENST00000438213 SLC39A2Q9NP94 309 aa17.83■□□□□ 0.44
CTSD-205ENST00000438213 HOOK1Q9UJC3 728 aaKnown RBP17.83■□□□□ 0.44
CTSD-205ENST00000438213 CPSF3Q9UKF6 684 aaKnown RBP17.83■□□□□ 0.44
CTSD-205ENST00000438213 ADAM28Q9UKQ2 775 aa17.83■□□□□ 0.44
CTSD-205ENST00000438213 UBE4BO95155 1302 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.82■□□□□ 0.44
CTSD-205ENST00000438213 TISP43B9A030 160 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 KIAA0391O15091 583 aaKnown RBP17.82■□□□□ 0.44
CTSD-205ENST00000438213 XPOTO43592 962 aaKnown RBP17.82■□□□□ 0.44
CTSD-205ENST00000438213 KLRC4O43908 158 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 FAM189A1O60320 539 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 SOD2P04179 222 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 RPN1P04843 607 aaKnown RBP17.82■□□□□ 0.44
CTSD-205ENST00000438213 CXCL8P10145 99 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 ADSSP30520 456 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 RPL9P32969 192 aaKnown RBP17.82■□□□□ 0.44
CTSD-205ENST00000438213 TNFSF9P41273 254 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 NRIP1P48552 1158 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 ACOT2P49753 483 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 SNRPFP62306 86 aaKnown RBP17.82■□□□□ 0.44
CTSD-205ENST00000438213 FAM160A1Q05DH4 1040 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 HYAL1Q12794 435 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 ELAVL2Q12926 359 aaKnown RBP17.82■□□□□ 0.44
CTSD-205ENST00000438213 ENOX2Q16206 610 aaKnown RBP17.82■□□□□ 0.44
CTSD-205ENST00000438213 KMT5BQ4FZB7 885 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 KIAA1841Q6NSI8 718 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 EP400NLQ6ZTU2 488 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 EPM2AIP1Q7L775 607 aaPredicted RBP17.82■□□□□ 0.44
CTSD-205ENST00000438213 RBM23Q86U06 439 aaKnown RBP17.82■□□□□ 0.44
CTSD-205ENST00000438213 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.82■□□□□ 0.44
CTSD-205ENST00000438213 ATXN2LQ8WWM7 1075 aaKnown RBP17.82■□□□□ 0.44
CTSD-205ENST00000438213 PABPC5Q96DU9 382 aaKnown RBP17.82■□□□□ 0.44
CTSD-205ENST00000438213 FAM212AQ96EL1 285 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 IPO9Q96P70 1041 aaKnown RBP17.82■□□□□ 0.44
CTSD-205ENST00000438213 ZBP1Q9H171 429 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 PRDM6Q9NQX0 595 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 MARCH5Q9NX47 278 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 IRAK3Q9Y616 596 aa17.82■□□□□ 0.44
CTSD-205ENST00000438213 C2orf71A6NGG8 1288 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 LACTBL1A8MY62 500 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 TRAPPC3O43617 180 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 ADRB2P07550 413 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 MRPS5P82675 430 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms