RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 ZNF449Q6P9G9 518 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 CCDC174Q6PII3 467 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 INTS8Q75QN2 995 aaKnown RBP13.22□□□□□ -0.29
TMEM116-202ENST00000437003 ERP27Q96DN0 273 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 PKD2L1Q9P0L9 805 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 DNAJC12Q9UKB3 198 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 ALG6Q9Y672 507 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 SCN9AQ15858 1988 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 H0YIN7 160 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 O00370 1275 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 AHCYL1O43865 530 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 EYA4O95677 639 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 CHRNA3P32297 505 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 STAT2P52630 851 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 DRG2P55039 364 aaKnown RBP13.22□□□□□ -0.29
TMEM116-202ENST00000437003 RRP1BQ14684 758 aaKnown RBP13.22□□□□□ -0.29
TMEM116-202ENST00000437003 AOC3Q16853 763 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 CBWD6Q4V339 395 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 CBWD3Q5JTY5 395 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 CBWD5Q5RIA9 395 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 LMNTD2Q8IXW0 634 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 TEKT4Q8WW24 435 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 CKAP2Q8WWK9 683 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 PRMT6Q96LA8 375 aaPredicted RBP13.22□□□□□ -0.29
TMEM116-202ENST00000437003 RAB3IPQ96QF0 476 aaPredicted RBP13.22□□□□□ -0.29
TMEM116-202ENST00000437003 NUDCD1Q96RS6 583 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 RPS6KC1Q96S38 1066 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 POLR3CQ9BUI4 534 aaPredicted RBP13.22□□□□□ -0.29
TMEM116-202ENST00000437003 MYLK2Q9H1R3 596 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 RNPEPL1Q9HAU8 725 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 INTUQ9ULD6 942 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 KIF13BQ9NQT8 1826 aa13.22□□□□□ -0.29
TMEM116-202ENST00000437003 ANKRD33BA6NCL7 494 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 DDX39AO00148 427 aaKnown RBP13.21□□□□□ -0.29
TMEM116-202ENST00000437003 PEX11AO75192 247 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 TMEM253P0C7T8 217 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 HSPA1LP34931 641 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 PSMC2P35998 433 aaKnown RBP13.21□□□□□ -0.29
TMEM116-202ENST00000437003 ECE1P42892 770 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 ZYXQ15942 572 aaKnown RBP13.21□□□□□ -0.29
TMEM116-202ENST00000437003 CROCCP2Q86T23 111 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 LONP2Q86WA8 852 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 SRRM1Q8IYB3 904 aaKnown RBP13.21□□□□□ -0.29
TMEM116-202ENST00000437003 CTTNBP2NLQ9P2B4 639 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 PRKAG3Q9UGI9 489 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 COL11A2P13942 1736 aaPredicted RBP13.21□□□□□ -0.29
TMEM116-202ENST00000437003 CYP3A4P08684 503 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 CCNB1P14635 433 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 GNAZP19086 355 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 CALB2P22676 271 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 TBC1D10BQ4KMP7 808 aaPredicted RBP13.21□□□□□ -0.29
TMEM116-202ENST00000437003 TMEM154Q6P9G4 183 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 CPNE8Q86YQ8 564 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 SUPT20HQ8NEM7 779 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 SLC30A5Q8TAD4 765 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 OLIG1Q8TAK6 271 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 TTC8Q8TAM2 541 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 WDR18Q9BV38 432 aa13.21□□□□□ -0.29
TMEM116-202ENST00000437003 GPBP1L1Q9HC44 474 aaPredicted RBP13.21□□□□□ -0.29
TMEM116-202ENST00000437003 ZMYM2Q9UBW7 1377 aa13.21□□□□□ -0.3
TMEM116-202ENST00000437003 NCANO14594 1321 aa13.21□□□□□ -0.3
TMEM116-202ENST00000437003 PIK3CDO00329 1044 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 SLC16A3O15427 465 aaKnown RBP13.2□□□□□ -0.3
TMEM116-202ENST00000437003 ENTPD3O75355 529 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 LMNB1P20700 586 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 TNFAIP3P21580 790 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 SOX5P35711 763 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 FMO5P49326 533 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 CCNG1P51959 295 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 CALCOCO2Q13137 446 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 MESDQ14696 234 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 BMT2Q1RMZ1 405 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 ODR4Q5SWX8 454 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 ARMC3Q5W041 872 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 MFSD5Q6N075 450 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 FAM178BQ8IXR5 827 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 CYP4X1Q8N118 509 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 AKT1S1Q96B36 256 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 TMEM109Q9BVC6 243 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 PITPNM3Q9BZ71 974 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 TAOK3Q9H2K8 898 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.2□□□□□ -0.3
TMEM116-202ENST00000437003 PARVGQ9HBI0 331 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 PARP2Q9UGN5 583 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 DIS3Q9Y2L1 958 aaKnown RBP13.2□□□□□ -0.3
TMEM116-202ENST00000437003 SYNGAP1Q96PV0 1343 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 IGLV3-22A0A075B6J6 115 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 PODXLO00592 558 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 ENTPD5O75356 428 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 SLITRK3O94933 977 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 TPBGLP0DKB5 382 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 CHKAP35790 457 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 RFC5P40937 340 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 TRIP13Q15645 432 aaPredicted RBP13.2□□□□□ -0.3
TMEM116-202ENST00000437003 KYNUQ16719 465 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 RNF220Q5VTB9 566 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 HS2ST1Q7LGA3 356 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 OTOP1Q7RTM1 612 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 SYCP3Q8IZU3 236 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 TEX9Q8N6V9 391 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms