RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 LOXL4Q96JB6 756 aa16.68■□□□□ 0.26
NELFE-204ENST00000436289 SH3GLB2Q9NR46 395 aa16.68■□□□□ 0.26
NELFE-204ENST00000436289 PKD1L2Q7Z442 2459 aa16.68■□□□□ 0.26
NELFE-204ENST00000436289 ADAMTS3O15072 1205 aa16.67■□□□□ 0.26
NELFE-204ENST00000436289 GDF9O60383 454 aa16.67■□□□□ 0.26
NELFE-204ENST00000436289 PTPN2P17706 415 aa16.67■□□□□ 0.26
NELFE-204ENST00000436289 KCNA4P22459 653 aa16.67■□□□□ 0.26
NELFE-204ENST00000436289 HOXA6P31267 233 aa16.67■□□□□ 0.26
NELFE-204ENST00000436289 NPEPPSP55786 919 aa16.67■□□□□ 0.26
NELFE-204ENST00000436289 AASDHQ4L235 1098 aaPredicted RBP16.67■□□□□ 0.26
NELFE-204ENST00000436289 TANGO2Q6ICL3 276 aa16.67■□□□□ 0.26
NELFE-204ENST00000436289 SLC27A1Q6PCB7 646 aa16.67■□□□□ 0.26
NELFE-204ENST00000436289 C4orf19Q8IY42 314 aa16.67■□□□□ 0.26
NELFE-204ENST00000436289 TBCKQ8TEA7 893 aa16.67■□□□□ 0.26
NELFE-204ENST00000436289 APOL6Q9BWW8 343 aa16.67■□□□□ 0.26
NELFE-204ENST00000436289 NFKBIZQ9BYH8 718 aa16.67■□□□□ 0.26
NELFE-204ENST00000436289 PLA2G2FQ9BZM2 168 aa16.67■□□□□ 0.26
NELFE-204ENST00000436289 TDRD15B5MCY1 1934 aaKnown RBP16.66■□□□□ 0.26
NELFE-204ENST00000436289 INO80B-WBP1J3KQ70 363 aa16.66■□□□□ 0.26
NELFE-204ENST00000436289 RHOP08100 348 aa16.66■□□□□ 0.26
NELFE-204ENST00000436289 FGD1P98174 961 aa16.66■□□□□ 0.26
NELFE-204ENST00000436289 PPP2R5CQ13362 524 aa16.66■□□□□ 0.26
NELFE-204ENST00000436289 LRRC32Q14392 662 aa16.66■□□□□ 0.26
NELFE-204ENST00000436289 KRT32Q14532 448 aa16.66■□□□□ 0.26
NELFE-204ENST00000436289 TSGA10IPQ3SY00 556 aa16.66■□□□□ 0.26
NELFE-204ENST00000436289 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.66■□□□□ 0.26
NELFE-204ENST00000436289 MAP4K3Q8IVH8 894 aa16.66■□□□□ 0.26
NELFE-204ENST00000436289 C12orf50Q8NA57 414 aaPredicted RBP16.66■□□□□ 0.26
NELFE-204ENST00000436289 ETNPPLQ8TBG4 499 aa16.66■□□□□ 0.26
NELFE-204ENST00000436289 GJA10Q969M2 543 aa16.66■□□□□ 0.26
NELFE-204ENST00000436289 FAM20AQ96MK3 541 aa16.66■□□□□ 0.26
NELFE-204ENST00000436289 HCFC1R1Q9NWW0 138 aa16.66■□□□□ 0.26
NELFE-204ENST00000436289 PARP2Q9UGN5 583 aa16.66■□□□□ 0.26
NELFE-204ENST00000436289 RALGAPA1Q6GYQ0 2036 aa16.65■□□□□ 0.26
NELFE-204ENST00000436289 A0A1B0GUA9 196 aa16.65■□□□□ 0.26
NELFE-204ENST00000436289 ZNF806P0C7X5 589 aa16.65■□□□□ 0.26
NELFE-204ENST00000436289 CHRNB1P11230 501 aa16.65■□□□□ 0.26
NELFE-204ENST00000436289 PSMC3P17980 439 aa16.65■□□□□ 0.26
NELFE-204ENST00000436289 ARF4P18085 180 aaPredicted RBP16.65■□□□□ 0.26
NELFE-204ENST00000436289 AKAP5P24588 427 aa16.65■□□□□ 0.26
NELFE-204ENST00000436289 OR1D2P34982 312 aa16.65■□□□□ 0.26
NELFE-204ENST00000436289 EMC2Q15006 297 aa16.65■□□□□ 0.26
NELFE-204ENST00000436289 DEPDC1BQ8WUY9 529 aa16.65■□□□□ 0.26
NELFE-204ENST00000436289 ING5Q8WYH8 240 aa16.65■□□□□ 0.26
NELFE-204ENST00000436289 CPB2Q96IY4 423 aa16.65■□□□□ 0.26
NELFE-204ENST00000436289 MTRQ99707 1265 aa16.65■□□□□ 0.26
NELFE-204ENST00000436289 RNF26Q9BY78 433 aaPredicted RBP16.65■□□□□ 0.26
NELFE-204ENST00000436289 NXF3Q9H4D5 531 aaKnown RBP16.65■□□□□ 0.26
NELFE-204ENST00000436289 ZNF334Q9HCZ1 680 aaPredicted RBP16.65■□□□□ 0.26
NELFE-204ENST00000436289 NAP1L2Q9ULW6 460 aaPredicted RBP16.65■□□□□ 0.26
NELFE-204ENST00000436289 BACE2Q9Y5Z0 518 aa16.65■□□□□ 0.26
NELFE-204ENST00000436289 THP07101 528 aa16.64■□□□□ 0.25
NELFE-204ENST00000436289 YWHABP31946 246 aaKnown RBP16.64■□□□□ 0.25
NELFE-204ENST00000436289 NLRP5P59047 1200 aa16.64■□□□□ 0.25
NELFE-204ENST00000436289 SATB1Q01826 763 aa16.64■□□□□ 0.25
NELFE-204ENST00000436289 CEP68Q76N32 757 aa16.64■□□□□ 0.25
NELFE-204ENST00000436289 FAM177A1Q8N128 213 aaPredicted RBP16.64■□□□□ 0.25
NELFE-204ENST00000436289 KDF1Q8NAX2 398 aaPredicted RBP16.64■□□□□ 0.25
NELFE-204ENST00000436289 E2F7Q96AV8 911 aa16.64■□□□□ 0.25
NELFE-204ENST00000436289 ESYT1Q9BSJ8 1104 aa16.64■□□□□ 0.25
NELFE-204ENST00000436289 SLKQ9H2G2 1235 aaPredicted RBP16.64■□□□□ 0.25
NELFE-204ENST00000436289 ANO2Q9NQ90 1003 aa16.64■□□□□ 0.25
NELFE-204ENST00000436289 MTRRQ9UBK8 725 aa16.64■□□□□ 0.25
NELFE-204ENST00000436289 RALYQ9UKM9 306 aaKnown RBP16.64■□□□□ 0.25
NELFE-204ENST00000436289 PIAS3Q9Y6X2 628 aa16.64■□□□□ 0.25
NELFE-204ENST00000436289 COL4A3Q01955 1670 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 ARHGEF37A1IGU5 675 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 TMEM8BA6NDV4 472 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 CHURC1-FNTBB4DL54 471 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 TRAPPC3O43617 180 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 LRG1P02750 347 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 FGFR3P22607 806 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 ELF1P32519 619 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 FNTBP49356 437 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 MBTD1Q05BQ5 628 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 PTGDRQ13258 359 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 DGKKQ5KSL6 1271 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 ANKS3Q6ZW76 656 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 FAM160A2Q8N612 972 aaPredicted RBP16.63■□□□□ 0.25
NELFE-204ENST00000436289 ZNF579Q8NAF0 562 aaKnown RBP16.63■□□□□ 0.25
NELFE-204ENST00000436289 ZNF461Q8TAF7 563 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 RABGGTAQ92696 567 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 LSM14BQ9BX40 385 aaKnown RBP16.63■□□□□ 0.25
NELFE-204ENST00000436289 ZSWIM4Q9H7M6 989 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 KLK14Q9P0G3 267 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 DDX25Q9UHL0 483 aaKnown RBP16.63■□□□□ 0.25
NELFE-204ENST00000436289 ZFYVE26Q68DK2 2539 aa16.63■□□□□ 0.25
NELFE-204ENST00000436289 EML1O00423 815 aa16.62■□□□□ 0.25
NELFE-204ENST00000436289 ZNF263O14978 683 aa16.62■□□□□ 0.25
NELFE-204ENST00000436289 ADAM12O43184 909 aa16.62■□□□□ 0.25
NELFE-204ENST00000436289 KIF4AO95239 1232 aa16.62■□□□□ 0.25
NELFE-204ENST00000436289 TDP2O95551 362 aa16.62■□□□□ 0.25
NELFE-204ENST00000436289 FCARP24071 287 aa16.62■□□□□ 0.25
NELFE-204ENST00000436289 GDI1P31150 447 aa16.62■□□□□ 0.25
NELFE-204ENST00000436289 EPHA7Q15375 998 aa16.62■□□□□ 0.25
NELFE-204ENST00000436289 AMHR2Q16671 573 aa16.62■□□□□ 0.25
NELFE-204ENST00000436289 SLC5A9Q2M3M2 681 aa16.62■□□□□ 0.25
NELFE-204ENST00000436289 XKR9Q5GH70 373 aa16.62■□□□□ 0.25
NELFE-204ENST00000436289 FAM78AQ5JUQ0 283 aa16.62■□□□□ 0.25
NELFE-204ENST00000436289 CYP4A22Q5TCH4 519 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms