RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 PDXDC1Q6P996 788 aa17.32■□□□□ 0.36
CALD1-208ENST00000435928 GPR152Q8TDT2 470 aa17.32■□□□□ 0.36
CALD1-208ENST00000435928 CLSTN3Q9BQT9 956 aa17.32■□□□□ 0.36
CALD1-208ENST00000435928 TBC1D17Q9HA65 648 aa17.32■□□□□ 0.36
CALD1-208ENST00000435928 FRYLO94915 3013 aa17.32■□□□□ 0.36
CALD1-208ENST00000435928 ANHXE9PGG2 379 aa17.31■□□□□ 0.36
CALD1-208ENST00000435928 EDN1P05305 212 aa17.31■□□□□ 0.36
CALD1-208ENST00000435928 C8AP07357 584 aa17.31■□□□□ 0.36
CALD1-208ENST00000435928 HNRNPA1P09651 372 aaKnown RBP eCLIP17.31■□□□□ 0.36
CALD1-208ENST00000435928 MUTP22033 750 aa17.31■□□□□ 0.36
CALD1-208ENST00000435928 GNL2Q13823 731 aaKnown RBP17.31■□□□□ 0.36
CALD1-208ENST00000435928 NAB2Q15742 525 aa17.31■□□□□ 0.36
CALD1-208ENST00000435928 PPM1LQ5SGD2 360 aa17.31■□□□□ 0.36
CALD1-208ENST00000435928 GRASPQ7Z6J2 395 aaPredicted RBP17.31■□□□□ 0.36
CALD1-208ENST00000435928 CCDC83Q8IWF9 413 aa17.31■□□□□ 0.36
CALD1-208ENST00000435928 LNX1Q8TBB1 728 aaPredicted RBP17.31■□□□□ 0.36
CALD1-208ENST00000435928 IFT74Q96LB3 600 aa17.31■□□□□ 0.36
CALD1-208ENST00000435928 KIFC3Q9BVG8 833 aa17.31■□□□□ 0.36
CALD1-208ENST00000435928 CXCL16Q9H2A7 254 aa17.31■□□□□ 0.36
CALD1-208ENST00000435928 FOXP1Q9H334 677 aaPredicted RBP17.31■□□□□ 0.36
CALD1-208ENST00000435928 USP20Q9Y2K6 914 aa17.31■□□□□ 0.36
CALD1-208ENST00000435928 GDAQ9Y2T3 454 aa17.31■□□□□ 0.36
CALD1-208ENST00000435928 ZFP37Q9Y6Q3 630 aaPredicted RBP17.31■□□□□ 0.36
CALD1-208ENST00000435928 NUMBLQ9Y6R0 609 aa17.31■□□□□ 0.36
CALD1-208ENST00000435928 CITO14578 2027 aa17.3■□□□□ 0.36
CALD1-208ENST00000435928 EFNA5P52803 228 aa17.3■□□□□ 0.36
CALD1-208ENST00000435928 TTC38Q5R3I4 469 aa17.3■□□□□ 0.36
CALD1-208ENST00000435928 EEF1DP3Q658K8 133 aa17.3■□□□□ 0.36
CALD1-208ENST00000435928 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.3■□□□□ 0.36
CALD1-208ENST00000435928 KIFAP3Q92845 792 aa17.3■□□□□ 0.36
CALD1-208ENST00000435928 SNX27Q96L92 541 aa17.3■□□□□ 0.36
CALD1-208ENST00000435928 ARHGEF3Q9NR81 526 aa17.3■□□□□ 0.36
CALD1-208ENST00000435928 POLIQ9UNA4 740 aa17.3■□□□□ 0.36
CALD1-208ENST00000435928 CCL16O15467 120 aa17.29■□□□□ 0.36
CALD1-208ENST00000435928 XYLBO75191 536 aa17.29■□□□□ 0.36
CALD1-208ENST00000435928 HOXA9P31269 272 aa17.29■□□□□ 0.36
CALD1-208ENST00000435928 CCT6AP40227 531 aaKnown RBP17.29■□□□□ 0.36
CALD1-208ENST00000435928 GLRA4Q5JXX5 417 aa17.29■□□□□ 0.36
CALD1-208ENST00000435928 ATF7IP2Q5U623 682 aa17.29■□□□□ 0.36
CALD1-208ENST00000435928 APBB1IPQ7Z5R6 666 aaPredicted RBP17.29■□□□□ 0.36
CALD1-208ENST00000435928 ST13P5Q8NFI4 369 aaPredicted RBP17.29■□□□□ 0.36
CALD1-208ENST00000435928 SLC7A14Q8TBB6 771 aa17.29■□□□□ 0.36
CALD1-208ENST00000435928 LLPHQ9BRT6 129 aaKnown RBP17.29■□□□□ 0.36
CALD1-208ENST00000435928 BHMT2Q9H2M3 363 aa17.29■□□□□ 0.36
CALD1-208ENST00000435928 SLC2A4RGQ9NR83 387 aa17.29■□□□□ 0.36
CALD1-208ENST00000435928 PPP4R2Q9NY27 417 aa17.29■□□□□ 0.36
CALD1-208ENST00000435928 DAXXQ9UER7 740 aaPredicted RBP17.29■□□□□ 0.36
CALD1-208ENST00000435928 CDH7Q9ULB5 785 aa17.29■□□□□ 0.36
CALD1-208ENST00000435928 LIMCH1Q9UPQ0 1083 aa17.29■□□□□ 0.36
CALD1-208ENST00000435928 DCHS1Q96JQ0 3298 aa17.29■□□□□ 0.36
CALD1-208ENST00000435928 GVINP1Q7Z2Y8 2422 aa17.29■□□□□ 0.36
CALD1-208ENST00000435928 ZNF292O60281 2723 aa17.28■□□□□ 0.36
CALD1-208ENST00000435928 MYH11P35749 1972 aa17.28■□□□□ 0.36
CALD1-208ENST00000435928 DMXL1Q9Y485 3027 aa17.28■□□□□ 0.36
CALD1-208ENST00000435928 TMEM189-UBE2V1I3L0A0 370 aa17.28■□□□□ 0.36
CALD1-208ENST00000435928 ADAM12O43184 909 aa17.28■□□□□ 0.36
CALD1-208ENST00000435928 TRAPPC10P48553 1259 aa17.28■□□□□ 0.36
CALD1-208ENST00000435928 RBM25P49756 843 aaKnown RBP17.28■□□□□ 0.36
CALD1-208ENST00000435928 FXR2P51116 673 aaKnown RBP eCLIP17.28■□□□□ 0.36
CALD1-208ENST00000435928 NTHL1P78549 312 aa17.28■□□□□ 0.36
CALD1-208ENST00000435928 SPECC1Q5M775 1068 aa17.28■□□□□ 0.36
CALD1-208ENST00000435928 PHLDB3Q6NSJ2 640 aa17.28■□□□□ 0.36
CALD1-208ENST00000435928 ADSSL1Q8N142 457 aa17.28■□□□□ 0.36
CALD1-208ENST00000435928 PPP1R10Q96QC0 940 aaKnown RBP17.28■□□□□ 0.36
CALD1-208ENST00000435928 LRWD1Q9UFC0 647 aa17.28■□□□□ 0.36
CALD1-208ENST00000435928 NOL7Q9UMY1 257 aaKnown RBP17.28■□□□□ 0.36
CALD1-208ENST00000435928 FANCMQ8IYD8 2048 aa17.28■□□□□ 0.36
CALD1-208ENST00000435928 NOTCH4Q99466 2003 aa17.28■□□□□ 0.36
CALD1-208ENST00000435928 PHLPP2Q6ZVD8 1323 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 PDCD11Q14690 1871 aaKnown RBP17.27■□□□□ 0.36
CALD1-208ENST00000435928 B3GAT3O94766 335 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 FGFR3P22607 806 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 OR1D2P34982 312 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 CLCNKBP51801 687 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 HMGN5P82970 282 aaKnown RBP17.27■□□□□ 0.36
CALD1-208ENST00000435928 ECM1Q16610 540 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 AXDND1Q5T1B0 1012 aaPredicted RBP17.27■□□□□ 0.36
CALD1-208ENST00000435928 NT5DC1Q5TFE4 455 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 DCLRE1AQ6PJP8 1040 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 PARM1Q6UWI2 310 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 MTSS1LQ765P7 747 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 FAM184AQ8NB25 1140 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 FBXO18Q8NFZ0 1043 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 FGF14Q92915 247 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 UROC1Q96N76 676 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 POLD4Q9HCU8 107 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 MTRRQ9UBK8 725 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 KIAA1024Q9UPX6 916 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 SIT1Q9Y3P8 196 aa17.27■□□□□ 0.36
CALD1-208ENST00000435928 PATJQ8NI35 1801 aa17.26■□□□□ 0.35
CALD1-208ENST00000435928 K7ERI5 159 aa17.26■□□□□ 0.35
CALD1-208ENST00000435928 TRAPPC3O43617 180 aa17.26■□□□□ 0.35
CALD1-208ENST00000435928 DCNP07585 359 aaKnown RBP17.26■□□□□ 0.35
CALD1-208ENST00000435928 POU2F2P09086 479 aa17.26■□□□□ 0.35
CALD1-208ENST00000435928 YARSP54577 528 aaKnown RBP17.26■□□□□ 0.35
CALD1-208ENST00000435928 RAB33AQ14088 237 aa17.26■□□□□ 0.35
CALD1-208ENST00000435928 NBR1Q14596 966 aa17.26■□□□□ 0.35
CALD1-208ENST00000435928 SNX29Q8TEQ0 813 aa17.26■□□□□ 0.35
CALD1-208ENST00000435928 FGF13Q92913 245 aa17.26■□□□□ 0.35
CALD1-208ENST00000435928 RAB34Q9BZG1 259 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms