RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 RAPGEFL1Q9UHV5 662 aa24.28■■□□□ 1.48
SEMA3B-205ENST00000434030 ODF2LQ9ULJ1 636 aa24.28■■□□□ 1.48
SEMA3B-205ENST00000434030 KIF4AO95239 1232 aa24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 MCF2P10911 925 aa24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 OSTNP61366 133 aa24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 GLRA4Q5JXX5 417 aa24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 SPECC1Q5M775 1068 aa24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 MPZL3Q6UWV2 235 aa24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 ALKAL1Q6UXT8 129 aa24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 TMC5Q6UXY8 1006 aa24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 USP49Q70CQ1 688 aa24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 RASSF8Q8NHQ8 419 aa24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 FEZF2Q8TBJ5 459 aa24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 EPSTI1Q96J88 318 aa24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 REEP2Q9BRK0 252 aa24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 SFXN1Q9H9B4 322 aa24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 FBXO2Q9UK22 296 aaPredicted RBP24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 SRPRBQ9Y5M8 271 aaKnown RBP24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 SF3B1O75533 1304 aaKnown RBP eCLIP24.27■■□□□ 1.48
SEMA3B-205ENST00000434030 TRIOO75962 3097 aa24.26■■□□□ 1.47
SEMA3B-205ENST00000434030 STX6O43752 255 aa24.26■■□□□ 1.47
SEMA3B-205ENST00000434030 BRD1O95696 1058 aa24.26■■□□□ 1.47
SEMA3B-205ENST00000434030 SP100P23497 879 aaPredicted RBP24.26■■□□□ 1.47
SEMA3B-205ENST00000434030 YARSP54577 528 aaKnown RBP24.26■■□□□ 1.47
SEMA3B-205ENST00000434030 NCKAP1LP55160 1127 aa24.26■■□□□ 1.47
SEMA3B-205ENST00000434030 CEBPZQ03701 1054 aaKnown RBP24.26■■□□□ 1.47
SEMA3B-205ENST00000434030 XKR4Q5GH76 650 aa24.26■■□□□ 1.47
SEMA3B-205ENST00000434030 ATAT1Q5SQI0 421 aa24.26■■□□□ 1.47
SEMA3B-205ENST00000434030 RIN2Q8WYP3 895 aaPredicted RBP24.26■■□□□ 1.47
SEMA3B-205ENST00000434030 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.26■■□□□ 1.47
SEMA3B-205ENST00000434030 TOPORSQ9NS56 1045 aaPredicted RBP24.26■■□□□ 1.47
SEMA3B-205ENST00000434030 FNIP2Q9P278 1114 aa24.26■■□□□ 1.47
SEMA3B-205ENST00000434030 TECTAO75443 2155 aa24.25■■□□□ 1.47
SEMA3B-205ENST00000434030 SMIM28A0A1B0GU29 152 aa24.25■■□□□ 1.47
SEMA3B-205ENST00000434030 PRR33A8MZF0 331 aa24.25■■□□□ 1.47
SEMA3B-205ENST00000434030 TOM1L1O75674 476 aa24.25■■□□□ 1.47
SEMA3B-205ENST00000434030 DDIT3P35638 169 aa24.25■■□□□ 1.47
SEMA3B-205ENST00000434030 HAUS6Q7Z4H7 955 aa24.25■■□□□ 1.47
SEMA3B-205ENST00000434030 CLIC6Q96NY7 704 aa24.25■■□□□ 1.47
SEMA3B-205ENST00000434030 ACAP3Q96P50 834 aa24.25■■□□□ 1.47
SEMA3B-205ENST00000434030 ZSCAN16Q9H4T2 348 aaPredicted RBP24.25■■□□□ 1.47
SEMA3B-205ENST00000434030 MAN1C1Q9NR34 630 aa24.25■■□□□ 1.47
SEMA3B-205ENST00000434030 NR2E1Q9Y466 385 aa24.25■■□□□ 1.47
SEMA3B-205ENST00000434030 GTF3C3Q9Y5Q9 886 aa24.25■■□□□ 1.47
SEMA3B-205ENST00000434030 DOCK6Q96HP0 2047 aa24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 SPDYE4A6NLX3 237 aa24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 H0YCG3 227 aa24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 GLUD1P00367 558 aa24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 CLCNKBP51801 687 aa24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 ZNF131P52739 623 aa24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 RTP2Q5QGT7 225 aa24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 FAM171A1Q5VUB5 890 aa24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 ZPBP2Q6X784 338 aa24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 GPR149Q86SP6 731 aa24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 LARP4BQ92615 738 aaKnown RBP24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 EDAQ92838 391 aa24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 KCNN1Q92952 543 aa24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 USP28Q96RU2 1077 aa24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 TSHZ2Q9NRE2 1034 aa24.24■■□□□ 1.47
SEMA3B-205ENST00000434030 FAM13AO94988 1023 aa24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 HARSP12081 509 aaKnown RBP24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 RPL17P18621 184 aaKnown RBP24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 IGFBP6P24592 240 aaPredicted RBP24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 DCLRE1AQ6PJP8 1040 aa24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 PRSS55Q6UWB4 352 aaPredicted RBP24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 CEP57Q86XR8 500 aa24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 PALB2Q86YC2 1186 aa24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 GLYCTKQ8IVS8 523 aa24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 MYCT1Q8N699 235 aa24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 ZMAT2Q96NC0 199 aaKnown RBP24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 TTPALQ9BTX7 342 aa24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 PARVGQ9HBI0 331 aa24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 GOLGA2P5Q9HBQ8 144 aa24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 ANKFY1Q9P2R3 1169 aa24.23■■□□□ 1.47
SEMA3B-205ENST00000434030 TMEM189-UBE2V1I3L0A0 370 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 C1RP00736 705 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 KRT18P05783 430 aaKnown RBP24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 SPATA31D3P0C874 917 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 CREMQ03060 361 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 SOX4Q06945 474 aaPredicted RBP24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 ELAVL2Q12926 359 aaKnown RBP24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 NOLC1Q14978 699 aaKnown RBP eCLIP24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 SLC39A14Q15043 492 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 UPP1Q16831 310 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 LILRA6Q6PI73 481 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 CD300LGQ6UXG3 332 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 C15orf39Q6ZRI6 1047 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 SPATA31D4Q6ZUB0 917 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 LNX1Q8TBB1 728 aaPredicted RBP24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 SNX27Q96L92 541 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 UROC1Q96N76 676 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 HAPLN2Q9GZV7 340 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 CCDC39Q9UFE4 941 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 DPP7Q9UHL4 492 aa24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 MORC2Q9Y6X9 1032 aaPredicted RBP24.22■■□□□ 1.47
SEMA3B-205ENST00000434030 C2CD4DB7Z1M9 353 aa24.21■■□□□ 1.47
SEMA3B-205ENST00000434030 CLDN3O15551 220 aa24.21■■□□□ 1.47
SEMA3B-205ENST00000434030 MEFVO15553 781 aaPredicted RBP24.21■■□□□ 1.47
SEMA3B-205ENST00000434030 TGM5O43548 720 aa24.21■■□□□ 1.47
SEMA3B-205ENST00000434030 TRAK2O60296 914 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms