RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 CEP170P1Q96L14 293 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 ANAPC7Q9UJX3 599 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 HNRNPDLO14979 420 aaKnown RBP12.64□□□□□ -0.39
CD44-209ENST00000433892 RARGP13631 454 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 SFNP31947 248 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 GTF2A1P52655 376 aaPredicted RBP12.64□□□□□ -0.39
CD44-209ENST00000433892 KRT76Q01546 638 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 MAP3K10Q02779 954 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 CYP24A1Q07973 514 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 ADCY2Q08462 1091 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 SLMAPQ14BN4 828 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 CLEC16AQ2KHT3 1053 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 C2CD6Q53TS8 623 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 SGO2Q562F6 1265 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 ARMC9Q7Z3E5 817 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 ATXN2LQ8WWM7 1075 aaKnown RBP12.64□□□□□ -0.39
CD44-209ENST00000433892 LPAR1Q92633 364 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 MFSD14AQ96MC6 490 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 FAM213AQ9BRX8 229 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 CCDC113Q9H0I3 377 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 CTDP1Q9Y5B0 961 aaPredicted RBP12.64□□□□□ -0.39
CD44-209ENST00000433892 ADGRA3Q8IWK6 1321 aa12.64□□□□□ -0.39
CD44-209ENST00000433892 RASGRF2O14827 1237 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 ZNF862O60290 1169 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 ATP2C2O75185 946 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 MAPK4P31152 587 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 MCCD1P59942 119 aaPredicted RBP12.63□□□□□ -0.39
CD44-209ENST00000433892 SP4Q02446 784 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 KRT17Q04695 432 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 CALCOCO2Q13137 446 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 CCDC38Q502W7 563 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 LLGL2Q6P1M3 1020 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 CYFIP1Q7L576 1253 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 RTKN2Q8IZC4 609 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 TTLL6Q8N841 843 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 TMC2Q8TDI7 906 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 CPA5Q8WXQ8 436 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 ATG4AQ8WYN0 398 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 WNK4Q96J92 1243 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 CCDC114Q96M63 670 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 FBXL18Q96ME1 805 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 ZNF317Q96PQ6 595 aaPredicted RBP12.63□□□□□ -0.39
CD44-209ENST00000433892 MOV10L1Q9BXT6 1211 aaKnown RBP12.63□□□□□ -0.39
CD44-209ENST00000433892 LRRC19Q9H756 370 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 GABBR1Q9UBS5 961 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 TELO2Q9Y4R8 837 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 PCDHA10Q9Y5I2 948 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 PSME4Q14997 1843 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 TP73O15350 636 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 AGTP01019 485 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 SCP2P22307 547 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 MNAT1P51948 309 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 DRP2Q13474 957 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 ANKRD20A8PQ5CZ79 823 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 DAB2IPQ5VWQ8 1189 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 LMBRD2Q68DH5 695 aaPredicted RBP12.63□□□□□ -0.39
CD44-209ENST00000433892 NLRX1Q86UT6 975 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 C12orf50Q8NA57 414 aaPredicted RBP12.63□□□□□ -0.39
CD44-209ENST00000433892 RUNDC3BQ96NL0 473 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 PRMT1Q99873 361 aaKnown RBP12.63□□□□□ -0.39
CD44-209ENST00000433892 NTPCRQ9BSD7 190 aaKnown RBP12.63□□□□□ -0.39
CD44-209ENST00000433892 DDX23Q9BUQ8 820 aaKnown RBP12.63□□□□□ -0.39
CD44-209ENST00000433892 MTFR1LQ9H019 292 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 KIAA1683Q9H0B3 1180 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 CHST7Q9NS84 486 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 INTS9Q9NV88 658 aaKnown RBP12.63□□□□□ -0.39
CD44-209ENST00000433892 RIPK3Q9Y572 518 aa12.63□□□□□ -0.39
CD44-209ENST00000433892 FSCN2O14926 492 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 SORBS3O60504 671 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 ACSL3O95573 720 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 RRM1P23921 792 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 MTMR2Q13614 643 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 AUHQ13825 339 aaKnown RBP12.62□□□□□ -0.39
CD44-209ENST00000433892 BAATQ14032 418 aaPredicted RBP12.62□□□□□ -0.39
CD44-209ENST00000433892 TRIP13Q15645 432 aaPredicted RBP12.62□□□□□ -0.39
CD44-209ENST00000433892 USP37Q86T82 979 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 GPD1LQ8N335 351 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 MTMR14Q8NCE2 650 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 HVCN1Q96D96 273 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 BICD1Q96G01 975 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 HERPUD2Q9BSE4 406 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 MAP3K20Q9NYL2 800 aaKnown RBP12.62□□□□□ -0.39
CD44-209ENST00000433892 ASIC3Q9UHC3 531 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 ZNFX1Q9P2E3 1918 aaKnown RBP12.62□□□□□ -0.39
CD44-209ENST00000433892 UNGP13051 313 aaPredicted RBP12.62□□□□□ -0.39
CD44-209ENST00000433892 GTF2H1P32780 548 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 IFNAR2P48551 515 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 PLCB4Q15147 1175 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 LONRF1Q17RB8 773 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 OTUD6AQ7L8S5 288 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 MCOLN2Q8IZK6 566 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 SPIRE2Q8WWL2 714 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 ZNF516Q92618 1163 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 JPH2Q9BR39 696 aaPredicted RBP12.62□□□□□ -0.39
CD44-209ENST00000433892 TMEM109Q9BVC6 243 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 PLVAPQ9BX97 442 aa12.62□□□□□ -0.39
CD44-209ENST00000433892 CDC42EP4Q9H3Q1 356 aaKnown RBP12.62□□□□□ -0.39
CD44-209ENST00000433892 RPAP3Q9H6T3 665 aaPredicted RBP12.62□□□□□ -0.39
CD44-209ENST00000433892 ACTR5Q9H9F9 607 aaPredicted RBP12.62□□□□□ -0.39
CD44-209ENST00000433892 AAASQ9NRG9 546 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms