RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 CTXN1P60606 82 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 KIAA2012Q0VF49 1180 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 TARDBPQ13148 414 aaKnown RBP eCLIP7.32□□□□□ -1.24
USP54-206ENST00000433394 SP140Q13342 867 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 PLS1Q14651 629 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 KHDC1LQ5JSQ8 128 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 ATG14Q6ZNE5 492 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 KRTAP1-3Q8IUG1 177 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 ANKRD53Q8N9V6 530 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 TXNDC5Q8NBS9 432 aaKnown RBP7.32□□□□□ -1.24
USP54-206ENST00000433394 RAB24Q969Q5 203 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 MRGPRX4Q96LA9 322 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 TBCBQ99426 244 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 LDAHQ9H6V9 325 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 PNPLA8Q9NP80 782 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 NR2E1Q9Y466 385 aa7.32□□□□□ -1.24
USP54-206ENST00000433394 ISM1B1AKI9 464 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 ARHGAP6O43182 974 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 SASH1O94885 1247 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 RAP2AP10114 183 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 MTHFD1P11586 935 aaKnown RBP7.31□□□□□ -1.24
USP54-206ENST00000433394 CSF2RBP32927 897 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 NKX6-1P78426 367 aaPredicted RBP7.31□□□□□ -1.24
USP54-206ENST00000433394 ATP2C1P98194 919 aaPredicted RBP7.31□□□□□ -1.24
USP54-206ENST00000433394 TLE1Q04724 770 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 FLYWCH1Q4VC44 716 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 SLC44A4Q53GD3 710 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 BORAQ6PGQ7 559 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 GPR155Q7Z3F1 870 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 TRMT2AQ8IZ69 625 aaKnown RBP7.31□□□□□ -1.24
USP54-206ENST00000433394 CMTM4Q8IZR5 234 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 CARFQ8N187 725 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 OR14K1Q8NGZ2 314 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 IFI44Q8TCB0 444 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 ARL8AQ96BM9 186 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 SPATA25Q9BR10 227 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 STAP2Q9UGK3 403 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 SIK3Q9Y2K2 1263 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 LRCH1Q9Y2L9 728 aa7.31□□□□□ -1.24
USP54-206ENST00000433394 SLC5A1P13866 664 aa7.3□□□□□ -1.24
USP54-206ENST00000433394 BRAFP15056 766 aa7.3□□□□□ -1.24
USP54-206ENST00000433394 KCNJ5P48544 419 aa7.3□□□□□ -1.24
USP54-206ENST00000433394 AFF3P51826 1226 aaKnown RBP7.3□□□□□ -1.24
USP54-206ENST00000433394 APBA1Q02410 837 aa7.3□□□□□ -1.24
USP54-206ENST00000433394 CHAF1AQ13111 956 aaPredicted RBP7.3□□□□□ -1.24
USP54-206ENST00000433394 STK3Q13188 491 aa7.3□□□□□ -1.24
USP54-206ENST00000433394 HSP90AB4PQ58FF6 505 aa7.3□□□□□ -1.24
USP54-206ENST00000433394 APOA5Q6Q788 366 aa7.3□□□□□ -1.24
USP54-206ENST00000433394 VPS37AQ8NEZ2 397 aa7.3□□□□□ -1.24
USP54-206ENST00000433394 MDM1Q8TC05 714 aa7.3□□□□□ -1.24
USP54-206ENST00000433394 ADAMTS17Q8TE56 1095 aa7.3□□□□□ -1.24
USP54-206ENST00000433394 ZNF526Q8TF50 670 aaPredicted RBP7.3□□□□□ -1.24
USP54-206ENST00000433394 PHKBQ93100 1093 aa7.3□□□□□ -1.24
USP54-206ENST00000433394 IL17RAQ96F46 866 aa7.3□□□□□ -1.24
USP54-206ENST00000433394 RPL10LQ96L21 214 aaKnown RBP7.3□□□□□ -1.24
USP54-206ENST00000433394 C11orf54Q9H0W9 315 aaPredicted RBP7.3□□□□□ -1.24
USP54-206ENST00000433394 SIDT1Q9NXL6 827 aaKnown RBP7.3□□□□□ -1.24
USP54-206ENST00000433394 PADI4Q9UM07 663 aa7.3□□□□□ -1.24
USP54-206ENST00000433394 PAXBP1Q9Y5B6 917 aa7.3□□□□□ -1.24
USP54-206ENST00000433394 RASA4BC9J798 803 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 RASA4O43374 803 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 CREB3O43889 395 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 CD1AP06126 327 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 ZNF888P0CJ79 500 aaPredicted RBP7.29□□□□□ -1.24
USP54-206ENST00000433394 GUCY1A2P33402 732 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 TM4SF4P48230 202 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 FLT3LGP49771 235 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 GZMKP49863 264 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 ADCY7P51828 1080 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 MXRA7P84157 204 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 SNAPC2Q13487 334 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 MTM1Q13496 603 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 DHX8Q14562 1220 aaKnown RBP7.29□□□□□ -1.24
USP54-206ENST00000433394 SSPNQ14714 243 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 PKN1Q16512 942 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 PLEKHH3Q7Z736 793 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 NLGN4YQ8NFZ3 816 aaPredicted RBP7.29□□□□□ -1.24
USP54-206ENST00000433394 DEPTORQ8TB45 409 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 RABGGTAQ92696 567 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 PACSIN1Q9BY11 444 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 C22orf23Q9BZE7 217 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 ZMAT3Q9HA38 289 aaKnown RBP7.29□□□□□ -1.24
USP54-206ENST00000433394 MSL2Q9HCI7 577 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 SMG5Q9UPR3 1016 aaKnown RBP7.29□□□□□ -1.24
USP54-206ENST00000433394 CORO2BQ9UQ03 480 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 PCDHA1Q9Y5I3 950 aa7.29□□□□□ -1.24
USP54-206ENST00000433394 MROH6A6NGR9 719 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 AMY1AP04745 511 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 KITP10721 976 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 ALAS1P13196 640 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 ATP5JP18859 108 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 CASRP41180 1078 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 PIK3CGP48736 1102 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 ALDH5A1P51649 535 aaPredicted RBP7.28□□□□□ -1.24
USP54-206ENST00000433394 PABPC1LQ4VXU2 614 aaKnown RBP7.28□□□□□ -1.24
USP54-206ENST00000433394 FAM47AQ5JRC9 791 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 PRAMEF14Q5SWL7 426 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 ZNF572Q7Z3I7 529 aaPredicted RBP7.28□□□□□ -1.24
USP54-206ENST00000433394 KBTBD2Q8IY47 623 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 ZDHHC14Q8IZN3 488 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms