RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 C9orf50Q5SZB4 431 aa19.76■□□□□ 0.75
HMGN1-206ENST00000431390 NOTUMQ6P988 496 aa19.76■□□□□ 0.75
HMGN1-206ENST00000431390 SLC39A5Q6ZMH5 540 aa19.76■□□□□ 0.75
HMGN1-206ENST00000431390 CPLX3Q8WVH0 158 aa19.76■□□□□ 0.75
HMGN1-206ENST00000431390 CRACR2AQ9BSW2 395 aa19.76■□□□□ 0.75
HMGN1-206ENST00000431390 LSM14BQ9BX40 385 aaKnown RBP19.76■□□□□ 0.75
HMGN1-206ENST00000431390 KCNF1Q9H3M0 494 aa19.76■□□□□ 0.75
HMGN1-206ENST00000431390 GCNT4Q9P109 453 aa19.76■□□□□ 0.75
HMGN1-206ENST00000431390 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.76■□□□□ 0.756e-9■■■■■ 32.8
HMGN1-206ENST00000431390 ANK1P16157 1881 aa19.76■□□□□ 0.75
HMGN1-206ENST00000431390 PON1P27169 355 aa19.75■□□□□ 0.75
HMGN1-206ENST00000431390 TNFSF9P41273 254 aa19.75■□□□□ 0.75
HMGN1-206ENST00000431390 MXI1P50539 228 aa19.75■□□□□ 0.75
HMGN1-206ENST00000431390 ADKP55263 362 aaKnown RBP19.75■□□□□ 0.75
HMGN1-206ENST00000431390 TRIM71Q2Q1W2 868 aaKnown RBP19.75■□□□□ 0.75
HMGN1-206ENST00000431390 TRIM60Q495X7 471 aa19.75■□□□□ 0.75
HMGN1-206ENST00000431390 FAM26DQ5JW98 314 aa19.75■□□□□ 0.75
HMGN1-206ENST00000431390 KRT39Q6A163 491 aa19.75■□□□□ 0.75
HMGN1-206ENST00000431390 SLC27A1Q6PCB7 646 aa19.75■□□□□ 0.75
HMGN1-206ENST00000431390 CDR2LQ86X02 465 aaPredicted RBP19.75■□□□□ 0.75
HMGN1-206ENST00000431390 THNSL1Q8IYQ7 743 aa19.75■□□□□ 0.75
HMGN1-206ENST00000431390 CCDC112Q8NEF3 446 aa19.75■□□□□ 0.75
HMGN1-206ENST00000431390 DHX38Q92620 1227 aaKnown RBP19.75■□□□□ 0.75
HMGN1-206ENST00000431390 PANX2Q96RD6 677 aa19.75■□□□□ 0.75
HMGN1-206ENST00000431390 TMEM117Q9H0C3 514 aa19.75■□□□□ 0.75
HMGN1-206ENST00000431390 TMEM8AQ9HCN3 771 aa19.75■□□□□ 0.75
HMGN1-206ENST00000431390 FAM207AQ9NSI2 230 aaPredicted RBP19.75■□□□□ 0.75
HMGN1-206ENST00000431390 LUC7L2Q9Y383 392 aaKnown RBP19.75■□□□□ 0.75
HMGN1-206ENST00000431390 NRDCO43847 1150 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 CHRNA1P02708 482 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 DLATP10515 647 aaKnown RBP19.74■□□□□ 0.75
HMGN1-206ENST00000431390 THPOP40225 353 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 GCLMP48507 274 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 CDK7P50613 346 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 ZBED6P86452 979 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 SEZ6Q53EL9 994 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 FAM228AQ86W67 206 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 CGRRF1Q99675 332 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 PDE11AQ9HCR9 933 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 CEP72Q9P209 647 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 FBXL5Q9UKA1 691 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 DAAM1Q9Y4D1 1078 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 B4GALT4O60513 344 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 NOL4O94818 638 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 CLTAP09496 248 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 SLC9A1P19634 815 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 KRT9P35527 623 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 AP3M2P53677 418 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 EPC2Q52LR7 807 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 DPY19L2P1Q6NXN4 242 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 ZNF397Q8NF99 534 aaPredicted RBP19.74■□□□□ 0.75
HMGN1-206ENST00000431390 BADQ92934 168 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 ZNF830Q96NB3 372 aaPredicted RBP19.74■□□□□ 0.75
HMGN1-206ENST00000431390 CDX2Q99626 313 aaPredicted RBP19.74■□□□□ 0.75
HMGN1-206ENST00000431390 TMX1Q9H3N1 280 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 COQ4Q9Y3A0 265 aa19.74■□□□□ 0.75
HMGN1-206ENST00000431390 NOC2LQ9Y3T9 749 aaKnown RBP19.74■□□□□ 0.75
HMGN1-206ENST00000431390 RNF225M0QZC1 329 aaPredicted RBP19.73■□□□□ 0.75
HMGN1-206ENST00000431390 EPHB6O15197 1021 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 RPS6KA5O75582 802 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 IL18RAPO95256 599 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 CTSHP09668 335 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 STAG3L1P0CL83 205 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 TNNI1P19237 187 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 GRM5P41594 1212 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 WNT7BP56706 349 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 GOLGA8FQ08AF8 430 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 GOLGA8DPQ0D2H9 430 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 LRMPQ12912 555 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 ENOX2Q16206 610 aaKnown RBP19.73■□□□□ 0.75
HMGN1-206ENST00000431390 KLHDC7AQ5VTJ3 777 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 TRIM65Q6PJ69 517 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 C15orf39Q6ZRI6 1047 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 WDR49Q8IV35 697 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 CEP120Q8N960 986 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 POP1Q99575 1024 aaKnown RBP19.73■□□□□ 0.75
HMGN1-206ENST00000431390 DNAJC7Q99615 494 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 GANQ9H2C0 597 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 RPF1Q9H9Y2 349 aaKnown RBP19.73■□□□□ 0.75
HMGN1-206ENST00000431390 ABHD10Q9NUJ1 306 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 ZKSCAN5Q9Y2L8 839 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 SQORQ9Y6N5 450 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 CITO14578 2027 aa19.73■□□□□ 0.75
HMGN1-206ENST00000431390 RALGAPA2Q2PPJ7 1873 aa19.72■□□□□ 0.75
HMGN1-206ENST00000431390 CCZ1BP86790 482 aa19.72■□□□□ 0.75
HMGN1-206ENST00000431390 CCZ1P86791 482 aaPredicted RBP19.72■□□□□ 0.75
HMGN1-206ENST00000431390 SV2AQ7L0J3 742 aa19.72■□□□□ 0.75
HMGN1-206ENST00000431390 EHBP1Q8NDI1 1231 aa19.72■□□□□ 0.75
HMGN1-206ENST00000431390 OR8K1Q8NGG5 319 aa19.72■□□□□ 0.75
HMGN1-206ENST00000431390 LMO3Q8TAP4 145 aa19.72■□□□□ 0.75
HMGN1-206ENST00000431390 INTS2Q9H0H0 1204 aaKnown RBP19.72■□□□□ 0.75
HMGN1-206ENST00000431390 TRPV6Q9H1D0 765 aa19.72■□□□□ 0.75
HMGN1-206ENST00000431390 SIX2Q9NPC8 291 aa19.72■□□□□ 0.75
HMGN1-206ENST00000431390 TOPORSQ9NS56 1045 aaPredicted RBP19.72■□□□□ 0.75
HMGN1-206ENST00000431390 PIN4Q9Y237 131 aaKnown RBP19.72■□□□□ 0.75
HMGN1-206ENST00000431390 NPTXRO95502 500 aa19.71■□□□□ 0.75
HMGN1-206ENST00000431390 FECHP22830 423 aa19.71■□□□□ 0.75
HMGN1-206ENST00000431390 ZACNQ401N2 412 aa19.71■□□□□ 0.75
HMGN1-206ENST00000431390 CACNA2D4Q7Z3S7 1137 aa19.71■□□□□ 0.75
HMGN1-206ENST00000431390 USP38Q8NB14 1042 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms