RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 VARS2Q5ST30 1063 aaKnown RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 HECTD3Q5T447 861 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 PDPK2PQ6A1A2 396 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 DRICH1Q6PGQ1 229 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 TRIM72Q6ZMU5 477 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 FBXO33Q7Z6M2 555 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 REXO1L1PQ8IX06 675 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 STARD8Q92502 1023 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 ACSF2Q96CM8 615 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 ANKRD36BP1Q96IX9 119 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 FAM20AQ96MK3 541 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 NOX5Q96PH1 765 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 ELAC2Q9BQ52 826 aaKnown RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 TBCDQ9BTW9 1192 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 MRPL1Q9BYD6 325 aaKnown RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 CRNKL1Q9BZJ0 848 aaKnown RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 FAM192AQ9GZU8 254 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 KCNF1Q9H3M0 494 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 SEMA4AQ9H3S1 761 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 FAM204AQ9H8W3 233 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 SP140LQ9H930 580 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 CYP4F12Q9HCS2 524 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 AMACRQ9UHK6 382 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 RPS6KA6Q9UK32 745 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 RTCBQ9Y3I0 505 aaKnown RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 RIMBP3CA6NJZ7 1639 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 RIMBP3BA6NNM3 1639 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 RIMBP3Q9UFD9 1639 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 FRMPD2Q68DX3 1309 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 SERTM1A2A2V5 107 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 H0YCG3 227 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 APBB3O95704 486 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 PRG2P13727 222 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 PIK3CBP42338 1070 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 ETV1P50549 477 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 NUBP1P53384 320 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 POLR2GP62487 172 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 PFKPQ01813 784 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 SF3A3Q12874 501 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 RIPK1Q13546 671 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 SGSM1Q2NKQ1 1148 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 FBXO31Q5XUX0 539 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 ETFRF1Q6IPR1 90 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 C4orf50Q6ZRC1 276 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 ZC3H18Q86VM9 953 aaKnown RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 LURAP1LQ8IV03 231 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 ZNF248Q8NDW4 579 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 POC1BQ8TC44 478 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 HTRA1Q92743 480 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 UCN2Q96RP3 112 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 CDK5RAP1Q96SZ6 601 aaKnown RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 NUP88Q99567 741 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 DPH5Q9H2P9 285 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 FBRSQ9HAH7 460 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 PRDM11Q9NQV5 511 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 DACT1Q9NYF0 836 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 VPS28Q9UK41 221 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 BAG5Q9UL15 447 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 ZMIZ1Q9ULJ6 1067 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 MAGED2Q9UNF1 606 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 TDRKHQ9Y2W6 561 aaKnown RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 H7C1Q1 480 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 RIMBP2O15034 1052 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 KPNA5O15131 536 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 TRAPPC3O43617 180 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 NIPSNAP2O75323 286 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 MT-CO1P00395 513 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 XPAP23025 273 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 ME1P48163 572 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 GSK3AP49840 483 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 KRT76Q01546 638 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 ZNF45Q02386 682 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 STIM1Q13586 685 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 KRT24Q2M2I5 525 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 DAB2IPQ5VWQ8 1189 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 PGM2L1Q6PCE3 622 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 RTKN2Q8IZC4 609 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 MINDY2Q8NBR6 621 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 PEX13Q92968 403 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 SLC2A13Q96QE2 648 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 RTFDC1Q9BY42 306 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 RHOBTB2Q9BYZ6 727 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 ABCG8Q9H221 673 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 BHMT2Q9H2M3 363 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 DMAP1Q9NPF5 467 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 SEPT3Q9UH03 358 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 CRYL1Q9Y2S2 319 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 C17orf113A0A1B0GUU1 675 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 GSAPA4D1B5 854 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 RGSL1A5PLK6 1076 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 C2orf74A8MZ97 194 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 RASGRF2O14827 1237 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 ANGPT2O15123 496 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 RNGTTO60942 597 aaKnown RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 CLPTM1O96005 669 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 F13A1P00488 732 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 PAMP19021 973 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 CTNNA2P26232 953 aa5.67□□□□□ -1.5
PTPN4-203ENST00000430976 TLX1P31314 330 aaPredicted RBP5.67□□□□□ -1.5
PTPN4-203ENST00000430976 CASP5P51878 434 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms