RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 MTMR10Q9NXD2 777 aa27.4■■□□□ 1.98
CPNE1-212ENST00000430570 RB1P06400 928 aa27.39■■□□□ 1.97
CPNE1-212ENST00000430570 GALTP07902 379 aa27.39■■□□□ 1.97
CPNE1-212ENST00000430570 DSC1Q08554 894 aa27.39■■□□□ 1.97
CPNE1-212ENST00000430570 GRIK3Q13003 919 aa27.39■■□□□ 1.97
CPNE1-212ENST00000430570 NAB2Q15742 525 aa27.39■■□□□ 1.97
CPNE1-212ENST00000430570 KYAT1Q16773 422 aa27.39■■□□□ 1.97
CPNE1-212ENST00000430570 KLHL23Q8NBE8 558 aa27.39■■□□□ 1.97
CPNE1-212ENST00000430570 GUCD1Q96NT3 240 aa27.39■■□□□ 1.97
CPNE1-212ENST00000430570 FAM193BQ96PV7 902 aaPredicted RBP27.39■■□□□ 1.97
CPNE1-212ENST00000430570 RPF1Q9H9Y2 349 aaKnown RBP27.39■■□□□ 1.97
CPNE1-212ENST00000430570 CACNG4Q9UBN1 327 aa27.39■■□□□ 1.97
CPNE1-212ENST00000430570 CITO14578 2027 aa27.39■■□□□ 1.97
CPNE1-212ENST00000430570 SMIM28A0A1B0GU29 152 aa27.38■■□□□ 1.97
CPNE1-212ENST00000430570 LPXNO60711 386 aa27.38■■□□□ 1.97
CPNE1-212ENST00000430570 THP07101 528 aa27.38■■□□□ 1.97
CPNE1-212ENST00000430570 SLC11A1P49279 550 aa27.38■■□□□ 1.97
CPNE1-212ENST00000430570 GUF1Q8N442 669 aaKnown RBP27.38■■□□□ 1.97
CPNE1-212ENST00000430570 GDPD5Q8WTR4 605 aa27.38■■□□□ 1.97
CPNE1-212ENST00000430570 ZNF558Q96NG5 402 aa27.38■■□□□ 1.97
CPNE1-212ENST00000430570 PPP1R10Q96QC0 940 aaKnown RBP27.38■■□□□ 1.97
CPNE1-212ENST00000430570 FAM213AQ9BRX8 229 aa27.38■■□□□ 1.97
CPNE1-212ENST00000430570 PLVAPQ9BX97 442 aa27.38■■□□□ 1.97
CPNE1-212ENST00000430570 AAASQ9NRG9 546 aa27.38■■□□□ 1.97
CPNE1-212ENST00000430570 CNTN3Q9P232 1028 aa27.38■■□□□ 1.97
CPNE1-212ENST00000430570 PCDHB12Q9Y5F1 795 aa27.38■■□□□ 1.97
CPNE1-212ENST00000430570 CHD9Q3L8U1 2897 aa27.37■■□□□ 1.97
CPNE1-212ENST00000430570 TTC26A0AVF1 554 aa27.37■■□□□ 1.97
CPNE1-212ENST00000430570 LACTBL1A8MY62 500 aa27.37■■□□□ 1.97
CPNE1-212ENST00000430570 H3BNC9 293 aa27.37■■□□□ 1.97
CPNE1-212ENST00000430570 BIN1O00499 593 aa27.37■■□□□ 1.97
CPNE1-212ENST00000430570 BMP6P22004 513 aa27.37■■□□□ 1.97
CPNE1-212ENST00000430570 PRCPP42785 496 aa27.37■■□□□ 1.97
CPNE1-212ENST00000430570 SPAG1Q07617 926 aa27.37■■□□□ 1.97
CPNE1-212ENST00000430570 GPM6BQ13491 265 aa27.37■■□□□ 1.97
CPNE1-212ENST00000430570 HS2ST1Q7LGA3 356 aa27.37■■□□□ 1.97
CPNE1-212ENST00000430570 CDX2Q99626 313 aaPredicted RBP27.37■■□□□ 1.97
CPNE1-212ENST00000430570 HSPBP1Q9NZL4 362 aa27.37■■□□□ 1.97
CPNE1-212ENST00000430570 KIAA1468Q9P260 1216 aa27.37■■□□□ 1.97
CPNE1-212ENST00000430570 ITGB1P05556 798 aa27.36■■□□□ 1.97
CPNE1-212ENST00000430570 ADRB2P07550 413 aa27.36■■□□□ 1.97
CPNE1-212ENST00000430570 KCNE1P15382 129 aa27.36■■□□□ 1.97
CPNE1-212ENST00000430570 SNRPFP62306 86 aaKnown RBP27.36■■□□□ 1.97
CPNE1-212ENST00000430570 ADGRE1Q14246 886 aa27.36■■□□□ 1.97
CPNE1-212ENST00000430570 TMEM173Q86WV6 379 aaPredicted RBP27.36■■□□□ 1.97
CPNE1-212ENST00000430570 SLC39A11Q8N1S5 342 aa27.36■■□□□ 1.97
CPNE1-212ENST00000430570 RABGGTAQ92696 567 aa27.36■■□□□ 1.97
CPNE1-212ENST00000430570 P2RX5Q93086 422 aa27.36■■□□□ 1.97
CPNE1-212ENST00000430570 FAM212AQ96EL1 285 aa27.36■■□□□ 1.97
CPNE1-212ENST00000430570 PAAF1Q9BRP4 392 aa27.36■■□□□ 1.97
CPNE1-212ENST00000430570 TMEM175Q9BSA9 504 aa27.36■■□□□ 1.97
CPNE1-212ENST00000430570 NUP62CLQ9H1M0 184 aa27.36■■□□□ 1.97
CPNE1-212ENST00000430570 PLEKHA5Q9HAU0 1116 aa27.36■■□□□ 1.97
CPNE1-212ENST00000430570 ALG13Q9NP73 1137 aaKnown RBP27.36■■□□□ 1.97
CPNE1-212ENST00000430570 NRP1O14786 923 aa27.35■■□□□ 1.97
CPNE1-212ENST00000430570 GRM6O15303 877 aa27.35■■□□□ 1.97
CPNE1-212ENST00000430570 EXTL3O43909 919 aa27.35■■□□□ 1.97
CPNE1-212ENST00000430570 LDHAP00338 332 aaKnown RBP27.35■■□□□ 1.97
CPNE1-212ENST00000430570 ALDH2P05091 517 aa27.35■■□□□ 1.97
CPNE1-212ENST00000430570 ALDH7A1P49419 539 aaKnown RBP27.35■■□□□ 1.97
CPNE1-212ENST00000430570 SOX4Q06945 474 aaPredicted RBP27.35■■□□□ 1.97
CPNE1-212ENST00000430570 MORC3Q14149 939 aa27.35■■□□□ 1.97
CPNE1-212ENST00000430570 C12orf56Q8IXR9 622 aa27.35■■□□□ 1.97
CPNE1-212ENST00000430570 GPD1LQ8N335 351 aa27.35■■□□□ 1.97
CPNE1-212ENST00000430570 TMEM130Q8N3G9 435 aa27.35■■□□□ 1.97
CPNE1-212ENST00000430570 NOC3LQ8WTT2 800 aaKnown RBP27.35■■□□□ 1.97
CPNE1-212ENST00000430570 BCL7CQ8WUZ0 217 aaPredicted RBP27.35■■□□□ 1.97
CPNE1-212ENST00000430570 MYLIPQ8WY64 445 aa27.35■■□□□ 1.97
CPNE1-212ENST00000430570 CDH23Q9H251 3354 aa27.34■■□□□ 1.97
CPNE1-212ENST00000430570 CASTOR2A6NHX0 329 aa27.34■■□□□ 1.97
CPNE1-212ENST00000430570 PDXKO00764 312 aa27.34■■□□□ 1.97
CPNE1-212ENST00000430570 FGF18O76093 207 aa27.34■■□□□ 1.97
CPNE1-212ENST00000430570 KIF20AO95235 890 aa27.34■■□□□ 1.97
CPNE1-212ENST00000430570 OR1G1P47890 313 aa27.34■■□□□ 1.97
CPNE1-212ENST00000430570 CYP2J2P51589 502 aa27.34■■□□□ 1.97
CPNE1-212ENST00000430570 WNT7BP56706 349 aa27.34■■□□□ 1.97
CPNE1-212ENST00000430570 PPP2R3AQ06190 1150 aa27.34■■□□□ 1.97
CPNE1-212ENST00000430570 TUSC3Q13454 348 aa27.34■■□□□ 1.97
CPNE1-212ENST00000430570 SPPL3Q8TCT6 385 aa27.34■■□□□ 1.97
CPNE1-212ENST00000430570 C11orf84Q9BUA3 381 aaPredicted RBP27.34■■□□□ 1.97
CPNE1-212ENST00000430570 GOLGA2P5Q9HBQ8 144 aa27.34■■□□□ 1.97
CPNE1-212ENST00000430570 SPG21Q9NZD8 308 aa27.34■■□□□ 1.97
CPNE1-212ENST00000430570 CGNQ9P2M7 1197 aaKnown RBP27.34■■□□□ 1.97
CPNE1-212ENST00000430570 FAN1Q9Y2M0 1017 aa27.34■■□□□ 1.97
CPNE1-212ENST00000430570 COL4A4P53420 1690 aaPredicted RBP27.34■■□□□ 1.97
CPNE1-212ENST00000430570 F8W810 466 aa27.33■■□□□ 1.97
CPNE1-212ENST00000430570 KIAA0391O15091 583 aaKnown RBP27.33■■□□□ 1.97
CPNE1-212ENST00000430570 CD44P16070 742 aaKnown RBP27.33■■□□□ 1.97
CPNE1-212ENST00000430570 COBLL1Q53SF7 1204 aa27.33■■□□□ 1.97
CPNE1-212ENST00000430570 CBWD2Q8IUF1 395 aa27.33■■□□□ 1.97
CPNE1-212ENST00000430570 C18orf25Q96B23 403 aaPredicted RBP27.33■■□□□ 1.97
CPNE1-212ENST00000430570 FBXL18Q96ME1 805 aa27.33■■□□□ 1.97
CPNE1-212ENST00000430570 MARCH5Q9NX47 278 aa27.33■■□□□ 1.97
CPNE1-212ENST00000430570 TRAF3IP3Q9Y228 551 aa27.33■■□□□ 1.97
CPNE1-212ENST00000430570 PRG3Q9Y2Y8 225 aaPredicted RBP27.33■■□□□ 1.97
CPNE1-212ENST00000430570 CHD7Q9P2D1 2997 aa27.32■■□□□ 1.96
CPNE1-212ENST00000430570 ANK1P16157 1881 aa27.32■■□□□ 1.96
CPNE1-212ENST00000430570 IGFBP6P24592 240 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-212ENST00000430570 DNAJB1P25685 340 aa27.32■■□□□ 1.96
CPNE1-212ENST00000430570 POU5F1Q01860 360 aaKnown RBP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms