RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 B4GALT3O60512 393 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 TBCAO75347 108 aaKnown RBP10□□□□□ -0.81
HDAC9-211ENST00000430454 TOM1L1O75674 476 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 RPL9P32969 192 aaKnown RBP10□□□□□ -0.81
HDAC9-211ENST00000430454 IL17AQ16552 155 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 NT5DC1Q5TFE4 455 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 FAM171A1Q5VUB5 890 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 MPZL3Q6UWV2 235 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 ZPBP2Q6X784 338 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 PDZRN4Q6ZMN7 1036 aaPredicted RBP10□□□□□ -0.81
HDAC9-211ENST00000430454 RTL10Q7L3V2 364 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 CEP57Q86XR8 500 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 C12orf76Q8N812 135 aaPredicted RBP10□□□□□ -0.81
HDAC9-211ENST00000430454 NXPE3Q969Y0 559 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 BICD1Q96G01 975 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 INTS4Q96HW7 963 aaKnown RBP10□□□□□ -0.81
HDAC9-211ENST00000430454 TSPAN18Q96SJ8 248 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 RUSC1Q9BVN2 902 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 POMKQ9H5K3 350 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 ARHGAP28Q9P2N2 729 aa10□□□□□ -0.81
HDAC9-211ENST00000430454 TMEM189-UBE2V1I3L0A0 370 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 PTGESO14684 152 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 SLC16A4O15374 487 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 CLDN3O15551 220 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 XPOTO43592 962 aaKnown RBP9.99□□□□□ -0.81
HDAC9-211ENST00000430454 XYLBO75191 536 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 B3GAT3O94766 335 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 FAM13AO94988 1023 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 BRD1O95696 1058 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 EFEMP2O95967 443 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 HNRNPA1P09651 372 aaKnown RBP eCLIP9.99□□□□□ -0.81
HDAC9-211ENST00000430454 CDC25AP30304 524 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 NUBP1P53384 320 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 SLC12A3P55017 1021 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 CUL4AQ13619 759 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 PSMD5Q16401 504 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 TMEM119Q4V9L6 283 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 EEF1DP3Q658K8 133 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 ANKS3Q6ZW76 656 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 TAS1R1Q7RTX1 841 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 GPBP1Q86WP2 473 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 PALB2Q86YC2 1186 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 FBXL6Q8N531 539 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 KREMEN2Q8NCW0 462 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 PIK3R5Q8WYR1 880 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 MMTAG2Q9BU76 263 aaKnown RBP9.99□□□□□ -0.81
HDAC9-211ENST00000430454 GPR62Q9BZJ7 368 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 ZSCAN16Q9H4T2 348 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-211ENST00000430454 PARVGQ9HBI0 331 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.99□□□□□ -0.81
HDAC9-211ENST00000430454 IGSF9Q9P2J2 1179 aa9.99□□□□□ -0.81
HDAC9-211ENST00000430454 ZFP37Q9Y6Q3 630 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-211ENST00000430454 SMIM28A0A1B0GU29 152 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 SFI1A8K8P3 1242 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 C2CD4DB7Z1M9 353 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 H7C4K7 107 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 TGM5O43548 720 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 KIF4AO95239 1232 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 CD2BP2O95400 341 aaKnown RBP9.98□□□□□ -0.81
HDAC9-211ENST00000430454 CLTAP09496 248 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 MAPTP10636 758 aaKnown RBP9.98□□□□□ -0.81
HDAC9-211ENST00000430454 KCNE1P15382 129 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 SP100P23497 879 aaPredicted RBP9.98□□□□□ -0.81
HDAC9-211ENST00000430454 PAX3P23760 479 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 LIG4P49917 911 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 NOLC1Q14978 699 aaKnown RBP eCLIP9.98□□□□□ -0.81
HDAC9-211ENST00000430454 SF3A1Q15459 793 aaKnown RBP9.98□□□□□ -0.81
HDAC9-211ENST00000430454 UVSSAQ2YD98 709 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 HFE2Q6ZVN8 426 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 MYCT1Q8N699 235 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 KRI1Q8N9T8 703 aaKnown RBP9.98□□□□□ -0.81
HDAC9-211ENST00000430454 TMEM161BQ8NDZ6 487 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 APPL2Q8NEU8 664 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 SMG7Q92540 1137 aaKnown RBP9.98□□□□□ -0.81
HDAC9-211ENST00000430454 PNMA5Q96PV4 448 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 PPP1R10Q96QC0 940 aaKnown RBP9.98□□□□□ -0.81
HDAC9-211ENST00000430454 PLIN2Q99541 437 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 TARS2Q9BW92 718 aaKnown RBP9.98□□□□□ -0.81
HDAC9-211ENST00000430454 PRKD2Q9BZL6 878 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 CDT1Q9H211 546 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 MFSD1Q9H3U5 465 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 PLEKHA5Q9HAU0 1116 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 POLD4Q9HCU8 107 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 PTPRHQ9HD43 1115 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 WDR6Q9NNW5 1121 aaKnown RBP9.98□□□□□ -0.81
HDAC9-211ENST00000430454 ANKFY1Q9P2R3 1169 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 LIMD1Q9UGP4 676 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 NUB1Q9Y5A7 615 aa9.98□□□□□ -0.81
HDAC9-211ENST00000430454 TDRD15B5MCY1 1934 aaKnown RBP9.97□□□□□ -0.81
HDAC9-211ENST00000430454 ARHGEF37A1IGU5 675 aa9.97□□□□□ -0.81
HDAC9-211ENST00000430454 TTLL13PA6NNM8 815 aa9.97□□□□□ -0.81
HDAC9-211ENST00000430454 HNRNPDLO14979 420 aaKnown RBP9.97□□□□□ -0.81
HDAC9-211ENST00000430454 SYN3O14994 580 aa9.97□□□□□ -0.81
HDAC9-211ENST00000430454 ZMYND10O75800 440 aa9.97□□□□□ -0.81
HDAC9-211ENST00000430454 HSP90AA1P07900 732 aaKnown RBP9.97□□□□□ -0.81
HDAC9-211ENST00000430454 WEE2P0C1S8 567 aa9.97□□□□□ -0.81
HDAC9-211ENST00000430454 HARSP12081 509 aaKnown RBP9.97□□□□□ -0.81
HDAC9-211ENST00000430454 FGFR3P22607 806 aa9.97□□□□□ -0.81
HDAC9-211ENST00000430454 PROZP22891 400 aa9.97□□□□□ -0.81
HDAC9-211ENST00000430454 MARCKSP29966 332 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms