RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 SYTL3Q4VX76 610 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 CCDC137Q6PK04 289 aaKnown RBP17.29■□□□□ 0.36
RIF1-204ENST00000430328 TMEM35BQ8NCS4 154 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 AFG1LQ8WV93 481 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 MTO1Q9Y2Z2 717 aaKnown RBP17.29■□□□□ 0.36
RIF1-204ENST00000430328 ADGRA3Q8IWK6 1321 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 PSTPIP1O43586 416 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 ARL4DP49703 201 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 RCN1Q15293 331 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 TRPM8Q7Z2W7 1104 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 ADCK2Q7Z695 626 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 C11orf74Q86VG3 221 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 SH3TC2Q8TF17 1288 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 CARD14Q9BXL6 1004 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 STK39Q9UEW8 545 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 HERC5Q9UII4 1024 aaKnown RBP17.29■□□□□ 0.36
RIF1-204ENST00000430328 PCDHA4Q9UN74 947 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 FANCD2Q9BXW9 1451 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 CCT8P50990 548 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 SH3GLB1Q9Y371 365 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 PNMA8CA0A1B0GUJ8 204 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 CNOT3O75175 753 aaKnown RBP17.29■□□□□ 0.36
RIF1-204ENST00000430328 SLC39A14Q15043 492 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 ASPRV1Q53RT3 343 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 ZNF667Q5HYK9 610 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 PRPF39Q86UA1 669 aaKnown RBP17.29■□□□□ 0.36
RIF1-204ENST00000430328 PRRG3Q9BZD7 231 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 UBXN6Q9BZV1 441 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 E9PBE3 544 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 F5H423 210 aaPredicted RBP17.29■□□□□ 0.36
RIF1-204ENST00000430328 EIF3HO15372 352 aaKnown RBP eCLIP17.29■□□□□ 0.362e-6■■■□□ 15.4
RIF1-204ENST00000430328 ASAP3Q8TDY4 903 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 IP6K2Q9UHH9 426 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 DAPK2Q9UIK4 370 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 WARSP23381 471 aaKnown RBP17.29■□□□□ 0.36
RIF1-204ENST00000430328 AKR1D1P51857 326 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 GPATCH4Q5T3I0 446 aaKnown RBP17.29■□□□□ 0.36
RIF1-204ENST00000430328 COPG2Q9UBF2 871 aa17.29■□□□□ 0.36
RIF1-204ENST00000430328 MED26O95402 600 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 ECDO95905 644 aaPredicted RBP17.28■□□□□ 0.36
RIF1-204ENST00000430328 ICA1Q05084 483 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 EAPPQ56P03 285 aaPredicted RBP17.28■□□□□ 0.36
RIF1-204ENST00000430328 KLHL3Q9UH77 587 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 MYL2P10916 166 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 OSBPP22059 807 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 ALDH1B1P30837 517 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 MFSD14BQ5SR56 506 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 PEG10Q86TG7 708 aaKnown RBP17.28■□□□□ 0.36
RIF1-204ENST00000430328 PGBD4Q96DM1 585 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 DCAF5Q96JK2 942 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 CHAMP1Q96JM3 812 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 FAM129BQ96TA1 746 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 MSTO1Q9BUK6 570 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 VTA1Q9NP79 307 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 POLR3EQ9NVU0 708 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 PKP3Q9Y446 797 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 PITPNM2Q9BZ72 1349 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 RPS7P62081 194 aaKnown RBP17.28■□□□□ 0.36
RIF1-204ENST00000430328 KIZQ2M2Z5 673 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 VN1R5Q7Z5H4 357 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 CDKL3Q8IVW4 592 aaPredicted RBP17.28■□□□□ 0.36
RIF1-204ENST00000430328 TRABDQ9H4I3 376 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 SLC9A2Q9UBY0 812 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 SRGAP2O75044 1071 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 HSMCR30P0CW71 290 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 EIF2S3P41091 472 aaKnown RBP17.28■□□□□ 0.36
RIF1-204ENST00000430328 CCNA1P78396 465 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 ITGB3BPQ13352 177 aaPredicted RBP17.28■□□□□ 0.36
RIF1-204ENST00000430328 DHX34Q14147 1143 aaKnown RBP17.28■□□□□ 0.36
RIF1-204ENST00000430328 NUP85Q9BW27 656 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 TNKSO95271 1327 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 TRIM43BA6NCK2 446 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 KCNK10P57789 538 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 EFCAB5A4FU69 1503 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 NUDT18Q6ZVK8 323 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 LBHD1Q9BQE6 289 aaPredicted RBP17.28■□□□□ 0.36
RIF1-204ENST00000430328 STAP1Q9ULZ2 295 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 ADCY9O60503 1353 aa17.28■□□□□ 0.36
RIF1-204ENST00000430328 KCTD2Q14681 263 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 IFNL3Q8IZI9 196 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 SHCBP1Q8NEM2 672 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 ALG13Q9NP73 1137 aaKnown RBP17.27■□□□□ 0.36
RIF1-204ENST00000430328 GGT7Q9UJ14 662 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 V9GYQ6 96 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 NCOA1Q15788 1441 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 CARMIL3Q8ND23 1372 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 F8W810 466 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 ACTR2P61160 394 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 PHKG1Q16816 387 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 GSPT2Q8IYD1 628 aaKnown RBP17.27■□□□□ 0.36
RIF1-204ENST00000430328 PLEKHA5Q9HAU0 1116 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 FKBP14Q9NWM8 211 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 ADGRA2Q96PE1 1338 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 WNK4Q96J92 1243 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 PRR23AA6NEV1 266 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 ZNF473Q8WTR7 871 aaKnown RBP17.27■□□□□ 0.36
RIF1-204ENST00000430328 CATSPER2Q96P56 530 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 PACSIN1Q9BY11 444 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 CDY2AQ9Y6F7 541 aa17.27■□□□□ 0.36
RIF1-204ENST00000430328 CDY1Q9Y6F8 540 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms