RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 SEZ6Q53EL9 994 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 CCDC149Q6ZUS6 474 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 HACE1Q8IYU2 909 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 ZDHHC14Q8IZN3 488 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 CMASQ8NFW8 434 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-202ENST00000430200 RSAD2Q8WXG1 361 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 ZBTB45Q96K62 511 aaPredicted RBP12.97□□□□□ -0.33
HDAC4-202ENST00000430200 MYADMQ96S97 322 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 ACO2Q99798 780 aaKnown RBP12.97□□□□□ -0.33
HDAC4-202ENST00000430200 CLSTN3Q9BQT9 956 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 TARS2Q9BW92 718 aaKnown RBP12.97□□□□□ -0.33
HDAC4-202ENST00000430200 COLEC11Q9BWP8 271 aa12.97□□□□□ -0.33
HDAC4-202ENST00000430200 FANCMQ8IYD8 2048 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 TICRRQ7Z2Z1 1910 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 DCHS1Q96JQ0 3298 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 CCDC195A0A1B0GUA6 201 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 SLC16A4O15374 487 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 NARSO43776 548 aaKnown RBP12.96□□□□□ -0.33
HDAC4-202ENST00000430200 CLCNKBP51801 687 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 SLC12A3P55017 1021 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 OSTNP61366 133 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 MTMR3Q13615 1198 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 BMS1Q14692 1282 aaKnown RBP12.96□□□□□ -0.33
HDAC4-202ENST00000430200 PPP2R5AQ15172 486 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 ZRSR1Q15695 479 aaKnown RBP12.96□□□□□ -0.33
HDAC4-202ENST00000430200 TMEM132AQ24JP5 1023 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 USP41Q3LFD5 358 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 DCAF4L1Q3SXM0 396 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 ZNF568Q3ZCX4 644 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 ARSHQ5FYA8 562 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 ATAT1Q5SQI0 421 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 FAM171A1Q5VUB5 890 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 CWF19L1Q69YN2 538 aaKnown RBP12.96□□□□□ -0.33
HDAC4-202ENST00000430200 DTHD1Q6ZMT9 781 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 C15orf39Q6ZRI6 1047 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 ZBTB33Q86T24 672 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 TMEM105Q8N8V8 129 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 TMEM87AQ8NBN3 555 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 LNX1Q8TBB1 728 aaPredicted RBP12.96□□□□□ -0.33
HDAC4-202ENST00000430200 PIK3R5Q8WYR1 880 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 SNX27Q96L92 541 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 FBXW11Q9UKB1 542 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 TNFSF13BQ9Y275 285 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 USTQ9Y2C2 406 aa12.96□□□□□ -0.33
HDAC4-202ENST00000430200 CCDC169A6NNP5 214 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 LAD1O00515 517 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 NRG2O14511 850 aaPredicted RBP12.95□□□□□ -0.34
HDAC4-202ENST00000430200 THP07101 528 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 HARSP12081 509 aaKnown RBP12.95□□□□□ -0.34
HDAC4-202ENST00000430200 GUCY2CP25092 1073 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 TKTP29401 623 aaKnown RBP12.95□□□□□ -0.34
HDAC4-202ENST00000430200 GRM5P41594 1212 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 BRCC3P46736 316 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 EFNA5P52803 228 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 NTHL1P78549 312 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 PSMD5Q16401 504 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 RILPL1Q5EBL4 403 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 XKR4Q5GH76 650 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 KRT79Q5XKE5 535 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 ALYREFQ86V81 257 aaKnown RBP12.95□□□□□ -0.34
HDAC4-202ENST00000430200 TMEM161BQ8NDZ6 487 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 C18orf25Q96B23 403 aaPredicted RBP12.95□□□□□ -0.34
HDAC4-202ENST00000430200 DDX27Q96GQ7 796 aaKnown RBP12.95□□□□□ -0.34
HDAC4-202ENST00000430200 IFT74Q96LB3 600 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 MFSD14AQ96MC6 490 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 WDR6Q9NNW5 1121 aaKnown RBP12.95□□□□□ -0.34
HDAC4-202ENST00000430200 BLOC1S4Q9NUP1 217 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 FAM86C1Q9NVL1 165 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 FNIP2Q9P278 1114 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 STK39Q9UEW8 545 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 DENND4CQ5VZ89 1909 aa12.95□□□□□ -0.34
HDAC4-202ENST00000430200 ZFHX2Q9C0A1 2572 aaPredicted RBP12.95□□□□□ -0.34
HDAC4-202ENST00000430200 KIF26AQ9ULI4 1882 aaPredicted RBP12.95□□□□□ -0.34
HDAC4-202ENST00000430200 ZNF292O60281 2723 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 NUP210Q8TEM1 1887 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-202ENST00000430200 SMIM28A0A1B0GU29 152 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 SPDYE4A6NLX3 237 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 TMEM189-UBE2V1I3L0A0 370 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 K7ERI5 159 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 TADA2AO75478 443 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 MAPTP10636 758 aaKnown RBP12.94□□□□□ -0.34
HDAC4-202ENST00000430200 FGFR3P22607 806 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 DMP1Q13316 513 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-202ENST00000430200 UPP1Q16831 310 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 ZBTB41Q5SVQ8 909 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 POTEHQ6S545 545 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 ALKAL1Q6UXT8 129 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 USP49Q70CQ1 688 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 SMG7Q92540 1137 aaKnown RBP12.94□□□□□ -0.34
HDAC4-202ENST00000430200 REEP2Q9BRK0 252 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 ADPGKQ9BRR6 497 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 TTPALQ9BTX7 342 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 NT5C3AQ9H0P0 336 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 KCNK12Q9HB15 430 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 KMT5AQ9NQR1 393 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 TUBGCP4Q9UGJ1 667 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 DNM3Q9UQ16 869 aa12.94□□□□□ -0.34
HDAC4-202ENST00000430200 FAM189A1O60320 539 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 ZMYND10O75800 440 aa12.93□□□□□ -0.34
HDAC4-202ENST00000430200 PLA2G4BP0C869 781 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms