RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 MIOSQ9NXC5 875 aa16.28■□□□□ 0.2
GARNL3-204ENST00000429629 HSPBP1Q9NZL4 362 aa16.28■□□□□ 0.2
GARNL3-204ENST00000429629 PCDHB12Q9Y5F1 795 aa16.28■□□□□ 0.2
GARNL3-204ENST00000429629 ZNF233A6NK53 670 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 PTGESO14684 152 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 PSMA7O14818 248 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 MAPK13O15264 365 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 BMP6P22004 513 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 PAX3P23760 479 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 AFF1P51825 1210 aaKnown RBP16.27■□□□□ 0.2
GARNL3-204ENST00000429629 RNASELQ05823 741 aaKnown RBP16.27■□□□□ 0.2
GARNL3-204ENST00000429629 LRRC63Q05C16 580 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 TUSC3Q13454 348 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 SURF1Q15526 300 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 NAB2Q15742 525 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 SKOR2Q2VWA4 1001 aaPredicted RBP16.27■□□□□ 0.2
GARNL3-204ENST00000429629 ZCWPW2Q504Y3 356 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 ZNF697Q5TEC3 545 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 KCNT2Q6UVM3 1135 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 COLGALT2Q8IYK4 626 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 ERCC4Q92889 916 aaPredicted RBP16.27■□□□□ 0.2
GARNL3-204ENST00000429629 DDX27Q96GQ7 796 aaKnown RBP16.27■□□□□ 0.2
GARNL3-204ENST00000429629 LRCH3Q96II8 777 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 UROC1Q96N76 676 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 ZNF558Q96NG5 402 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 FAM193BQ96PV7 902 aaPredicted RBP16.27■□□□□ 0.2
GARNL3-204ENST00000429629 APOL6Q9BWW8 343 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 IKZF4Q9H2S9 585 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 NRDE2Q9H7Z3 1164 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 INPP5FQ9Y2H2 1132 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 C2CD2Q9Y426 696 aa16.27■□□□□ 0.2
GARNL3-204ENST00000429629 PPP1R3GB7ZBB8 358 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 H3BNC9 293 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 XPOTO43592 962 aaKnown RBP16.26■□□□□ 0.19
GARNL3-204ENST00000429629 DDHD2O94830 711 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 ARHGEF15O94989 841 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 GALTP07902 379 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 HARSP12081 509 aaKnown RBP16.26■□□□□ 0.19
GARNL3-204ENST00000429629 POU3F3P20264 500 aaPredicted RBP16.26■□□□□ 0.19
GARNL3-204ENST00000429629 IBSPP21815 317 aaPredicted RBP16.26■□□□□ 0.19
GARNL3-204ENST00000429629 RPL9P32969 192 aaKnown RBP16.26■□□□□ 0.19
GARNL3-204ENST00000429629 ACOT2P49753 483 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 SCNN1GP51170 649 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 OSTNP61366 133 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 PLCB3Q01970 1234 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 UBE3AQ05086 875 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 PPP2R3AQ06190 1150 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 PAN2Q504Q3 1202 aaKnown RBP16.26■□□□□ 0.19
GARNL3-204ENST00000429629 EPC2Q52LR7 807 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 BRSK2Q8IWQ3 736 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 SYAP1Q96A49 352 aaPredicted RBP16.26■□□□□ 0.19
GARNL3-204ENST00000429629 FAM213AQ9BRX8 229 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 C11orf84Q9BUA3 381 aaPredicted RBP16.26■□□□□ 0.19
GARNL3-204ENST00000429629 TTYH1Q9H313 450 aaPredicted RBP16.26■□□□□ 0.19
GARNL3-204ENST00000429629 LMCD1Q9NZU5 365 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 KLK14Q9P0G3 267 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 LZTS1Q9Y250 596 aa16.26■□□□□ 0.19
GARNL3-204ENST00000429629 LACTBL1A8MY62 500 aa16.25■□□□□ 0.19
GARNL3-204ENST00000429629 MEFVO15553 781 aaPredicted RBP16.25■□□□□ 0.19
GARNL3-204ENST00000429629 POMCP01189 267 aa16.25■□□□□ 0.19
GARNL3-204ENST00000429629 CXCL8P10145 99 aa16.25■□□□□ 0.19
GARNL3-204ENST00000429629 CCNE1P24864 410 aa16.25■□□□□ 0.19
GARNL3-204ENST00000429629 TNFSF9P41273 254 aa16.25■□□□□ 0.19
GARNL3-204ENST00000429629 BCAR1P56945 870 aa16.25■□□□□ 0.19
GARNL3-204ENST00000429629 CCDC183Q5T5S1 534 aa16.25■□□□□ 0.19
GARNL3-204ENST00000429629 ZNF280BQ86YH2 543 aa16.25■□□□□ 0.19
GARNL3-204ENST00000429629 ZC3H3Q8IXZ2 948 aaKnown RBP16.25■□□□□ 0.19
GARNL3-204ENST00000429629 COLGALT1Q8NBJ5 622 aa16.25■□□□□ 0.19
GARNL3-204ENST00000429629 MFSD14AQ96MC6 490 aa16.25■□□□□ 0.19
GARNL3-204ENST00000429629 LMAN2LQ9H0V9 348 aa16.25■□□□□ 0.19
GARNL3-204ENST00000429629 SPG21Q9NZD8 308 aa16.25■□□□□ 0.19
GARNL3-204ENST00000429629 MAPK8IP1Q9UQF2 711 aa16.25■□□□□ 0.19
GARNL3-204ENST00000429629 BICDL2A1A5D9 508 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 TMEM189-UBE2V1I3L0A0 370 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 CLIC2O15247 247 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 EXOC3O60645 756 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 LETM1O95202 739 aaPredicted RBP16.24■□□□□ 0.19
GARNL3-204ENST00000429629 NR3C1P04150 777 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 FKBP3Q00688 224 aaKnown RBP16.24■□□□□ 0.19
GARNL3-204ENST00000429629 KRT17Q04695 432 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 ADAM9Q13443 819 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 SNRNP35Q16560 246 aaKnown RBP16.24■□□□□ 0.19
GARNL3-204ENST00000429629 SEZ6Q53EL9 994 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 ZBTB41Q5SVQ8 909 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 SPOUT1Q5T280 376 aaKnown RBP16.24■□□□□ 0.19
GARNL3-204ENST00000429629 GPR65Q8IYL9 337 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 SMYD4Q8IYR2 804 aaPredicted RBP16.24■□□□□ 0.19
GARNL3-204ENST00000429629 SLC39A11Q8N1S5 342 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 FBXO22Q8NEZ5 403 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 ZMAT2Q96NC0 199 aaKnown RBP16.24■□□□□ 0.19
GARNL3-204ENST00000429629 TSG101Q99816 390 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 C17orf80Q9BSJ5 609 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 MKNK1Q9BUB5 465 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 COLEC11Q9BWP8 271 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 PCIF1Q9H4Z3 704 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 RBAKQ9NYW8 714 aaPredicted RBP16.24■□□□□ 0.19
GARNL3-204ENST00000429629 UBQLN1Q9UMX0 589 aaKnown RBP16.24■□□□□ 0.19
GARNL3-204ENST00000429629 PLAGL2Q9UPG8 496 aa16.24■□□□□ 0.19
GARNL3-204ENST00000429629 FAN1Q9Y2M0 1017 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms