RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 KCNG4Q8TDN1 519 aa18.28■□□□□ 0.52
VARS-216ENST00000428445 HCFC1R1Q9NWW0 138 aa18.28■□□□□ 0.52
VARS-216ENST00000428445 FBXW11Q9UKB1 542 aa18.28■□□□□ 0.52
VARS-216ENST00000428445 CACNA1IQ9P0X4 2223 aa18.27■□□□□ 0.52
VARS-216ENST00000428445 N4BP3O15049 544 aa18.27■□□□□ 0.52
VARS-216ENST00000428445 PRKCBP05771 671 aa18.27■□□□□ 0.52
VARS-216ENST00000428445 C8AP07357 584 aa18.27■□□□□ 0.52
VARS-216ENST00000428445 NEK4P51957 841 aa18.27■□□□□ 0.52
VARS-216ENST00000428445 TRIM29Q14134 588 aa18.27■□□□□ 0.52
VARS-216ENST00000428445 FAM187BQ17R55 369 aa18.27■□□□□ 0.52
VARS-216ENST00000428445 PPM1LQ5SGD2 360 aa18.27■□□□□ 0.52
VARS-216ENST00000428445 DCLRE1AQ6PJP8 1040 aa18.27■□□□□ 0.52
VARS-216ENST00000428445 RSPO2Q6UXX9 243 aaPredicted RBP18.27■□□□□ 0.52
VARS-216ENST00000428445 NACC1Q96RE7 527 aa18.27■□□□□ 0.52
VARS-216ENST00000428445 CCDC113Q9H0I3 377 aa18.27■□□□□ 0.52
VARS-216ENST00000428445 TUFT1Q9NNX1 390 aa18.27■□□□□ 0.52
VARS-216ENST00000428445 ARHGEF3Q9NR81 526 aa18.27■□□□□ 0.52
VARS-216ENST00000428445 I3L4J1 428 aa18.26■□□□□ 0.51
VARS-216ENST00000428445 CYP11B2P19099 503 aa18.26■□□□□ 0.51
VARS-216ENST00000428445 OR1D2P34982 312 aa18.26■□□□□ 0.51
VARS-216ENST00000428445 SNW1Q13573 536 aaKnown RBP18.26■□□□□ 0.51
VARS-216ENST00000428445 MAPK6Q16659 721 aa18.26■□□□□ 0.51
VARS-216ENST00000428445 NT5DC1Q5TFE4 455 aa18.26■□□□□ 0.51
VARS-216ENST00000428445 CD300LGQ6UXG3 332 aa18.26■□□□□ 0.51
VARS-216ENST00000428445 GPR65Q8IYL9 337 aa18.26■□□□□ 0.51
VARS-216ENST00000428445 MCPH1Q8NEM0 835 aa18.26■□□□□ 0.51
VARS-216ENST00000428445 PIK3R5Q8WYR1 880 aa18.26■□□□□ 0.51
VARS-216ENST00000428445 NXPE3Q969Y0 559 aa18.26■□□□□ 0.51
VARS-216ENST00000428445 PRIMPOLQ96LW4 560 aa18.26■□□□□ 0.51
VARS-216ENST00000428445 POLR3CQ9BUI4 534 aaPredicted RBP18.26■□□□□ 0.51
VARS-216ENST00000428445 GOLGA2P5Q9HBQ8 144 aa18.26■□□□□ 0.51
VARS-216ENST00000428445 DLGAP2Q9P1A6 1054 aa18.26■□□□□ 0.51
VARS-216ENST00000428445 SIT1Q9Y3P8 196 aa18.26■□□□□ 0.51
VARS-216ENST00000428445 ARHGEF35A5YM69 484 aa18.25■□□□□ 0.51
VARS-216ENST00000428445 ACKR2O00590 384 aa18.25■□□□□ 0.51
VARS-216ENST00000428445 SEC24BO95487 1268 aa18.25■□□□□ 0.51
VARS-216ENST00000428445 CLCNKBP51801 687 aa18.25■□□□□ 0.51
VARS-216ENST00000428445 NBR1Q14596 966 aa18.25■□□□□ 0.51
VARS-216ENST00000428445 AXDND1Q5T1B0 1012 aaPredicted RBP18.25■□□□□ 0.51
VARS-216ENST00000428445 POTEHQ6S545 545 aa18.25■□□□□ 0.51
VARS-216ENST00000428445 DEPTORQ8TB45 409 aa18.25■□□□□ 0.51
VARS-216ENST00000428445 SLC7A14Q8TBB6 771 aa18.25■□□□□ 0.51
VARS-216ENST00000428445 ING5Q8WYH8 240 aa18.25■□□□□ 0.51
VARS-216ENST00000428445 FGF13Q92913 245 aa18.25■□□□□ 0.51
VARS-216ENST00000428445 CDH7Q9ULB5 785 aa18.25■□□□□ 0.51
VARS-216ENST00000428445 MTF2Q9Y483 593 aaPredicted RBP18.25■□□□□ 0.51
VARS-216ENST00000428445 C1RP00736 705 aa18.24■□□□□ 0.51
VARS-216ENST00000428445 CD72P21854 359 aa18.24■□□□□ 0.51
VARS-216ENST00000428445 RPA1P27694 616 aa18.24■□□□□ 0.51
VARS-216ENST00000428445 BRCC3P46736 316 aa18.24■□□□□ 0.51
VARS-216ENST00000428445 ID4P47928 161 aa18.24■□□□□ 0.51
VARS-216ENST00000428445 CREMQ03060 361 aa18.24■□□□□ 0.51
VARS-216ENST00000428445 LIN9Q5TKA1 542 aa18.24■□□□□ 0.51
VARS-216ENST00000428445 PHLDB3Q6NSJ2 640 aa18.24■□□□□ 0.51
VARS-216ENST00000428445 CEP120Q8N960 986 aa18.24■□□□□ 0.51
VARS-216ENST00000428445 KXD1Q9BQD3 176 aa18.24■□□□□ 0.51
VARS-216ENST00000428445 C2orf40Q9H1Z8 148 aa18.24■□□□□ 0.51
VARS-216ENST00000428445 SLC2A4RGQ9NR83 387 aa18.24■□□□□ 0.51
VARS-216ENST00000428445 DNMT3BQ9UBC3 853 aaKnown RBP18.24■□□□□ 0.51
VARS-216ENST00000428445 DAXXQ9UER7 740 aaPredicted RBP18.24■□□□□ 0.51
VARS-216ENST00000428445 EP300Q09472 2414 aaPredicted RBP18.24■□□□□ 0.51
VARS-216ENST00000428445 GVINP1Q7Z2Y8 2422 aa18.24■□□□□ 0.51
VARS-216ENST00000428445 FRYLO94915 3013 aa18.24■□□□□ 0.51
VARS-216ENST00000428445 ZMYM2Q9UBW7 1377 aa18.23■□□□□ 0.51
VARS-216ENST00000428445 B3GAT3O94766 335 aa18.23■□□□□ 0.51
VARS-216ENST00000428445 OR52Z1P0C646 297 aa18.23■□□□□ 0.51
VARS-216ENST00000428445 SP9P0CG40 484 aa18.23■□□□□ 0.51
VARS-216ENST00000428445 TKTP29401 623 aaKnown RBP18.23■□□□□ 0.51
VARS-216ENST00000428445 NAMPTP43490 491 aa18.23■□□□□ 0.51
VARS-216ENST00000428445 OSTNP61366 133 aa18.23■□□□□ 0.51
VARS-216ENST00000428445 CCDC83Q8IWF9 413 aa18.23■□□□□ 0.51
VARS-216ENST00000428445 C3orf58Q8NDZ4 430 aa18.23■□□□□ 0.51
VARS-216ENST00000428445 ADPGKQ9BRR6 497 aa18.23■□□□□ 0.51
VARS-216ENST00000428445 CDY1Q9Y6F8 540 aa18.23■□□□□ 0.51
VARS-216ENST00000428445 DMXL1Q9Y485 3027 aa18.23■□□□□ 0.51
VARS-216ENST00000428445 MIA3Q5JRA6 1907 aa18.22■□□□□ 0.51
VARS-216ENST00000428445 LMNAP02545 664 aaKnown RBP18.22■□□□□ 0.51
VARS-216ENST00000428445 HNRNPA1P09651 372 aaKnown RBP eCLIP18.22■□□□□ 0.51
VARS-216ENST00000428445 FGFR3P22607 806 aa18.22■□□□□ 0.51
VARS-216ENST00000428445 STARD6P59095 220 aa18.22■□□□□ 0.51
VARS-216ENST00000428445 SOX4Q06945 474 aaPredicted RBP18.22■□□□□ 0.51
VARS-216ENST00000428445 RAB33AQ14088 237 aa18.22■□□□□ 0.51
VARS-216ENST00000428445 ATF7IP2Q5U623 682 aa18.22■□□□□ 0.51
VARS-216ENST00000428445 C1orf210Q8IVY1 113 aa18.22■□□□□ 0.51
VARS-216ENST00000428445 MAML2Q8IZL2 1156 aaPredicted RBP18.22■□□□□ 0.51
VARS-216ENST00000428445 TMEM130Q8N3G9 435 aa18.22■□□□□ 0.51
VARS-216ENST00000428445 DCLK2Q8N568 766 aa18.22■□□□□ 0.51
VARS-216ENST00000428445 PJA1Q8NG27 643 aa18.22■□□□□ 0.51
VARS-216ENST00000428445 PPP1R10Q96QC0 940 aaKnown RBP18.22■□□□□ 0.51
VARS-216ENST00000428445 PLA2G2FQ9BZM2 168 aa18.22■□□□□ 0.51
VARS-216ENST00000428445 BHMT2Q9H2M3 363 aa18.22■□□□□ 0.51
VARS-216ENST00000428445 NEFLP07196 543 aa18.21■□□□□ 0.51
VARS-216ENST00000428445 CCT6AP40227 531 aaKnown RBP18.21■□□□□ 0.51
VARS-216ENST00000428445 SAFBQ15424 915 aaKnown RBP eCLIP18.21■□□□□ 0.51
VARS-216ENST00000428445 SLC44A4Q53GD3 710 aa18.21■□□□□ 0.51
VARS-216ENST00000428445 TTC38Q5R3I4 469 aa18.21■□□□□ 0.51
VARS-216ENST00000428445 ERICH6BQ5W0A0 696 aa18.21■□□□□ 0.51
VARS-216ENST00000428445 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.21■□□□□ 0.51
VARS-216ENST00000428445 KIAA2013Q8IYS2 634 aa18.21■□□□□ 0.51
VARS-216ENST00000428445 C4orf32Q8N8J7 132 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms