RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 HBP1O60381 514 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 TOM1L1O75674 476 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 VNN1O95497 513 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 PRKCBP05771 671 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 ZNF286BP0CG31 522 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 INSRRP14616 1297 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 PDE6CP51160 858 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 OSTNP61366 133 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 FMO1Q01740 532 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 SPRYD7Q5W111 196 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 CCDC70Q6NSX1 233 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 ZNF572Q7Z3I7 529 aaPredicted RBP11.2□□□□□ -0.62
HDAC9-210ENST00000428307 GPR142Q7Z601 462 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 NT5DC3Q86UY8 548 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 ZBTB8OSQ8IWT0 167 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 GSPT2Q8IYD1 628 aaKnown RBP11.2□□□□□ -0.62
HDAC9-210ENST00000428307 ISCUQ9H1K1 167 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.2□□□□□ -0.62
HDAC9-210ENST00000428307 CTTNBP2NLQ9P2B4 639 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 L1RE1Q9UN81 338 aa11.2□□□□□ -0.62
HDAC9-210ENST00000428307 B4GALT5O43286 388 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
HDAC9-210ENST00000428307 STRNO43815 780 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 PHACTR2O75167 634 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 SNAI1O95863 264 aaPredicted RBP11.19□□□□□ -0.62
HDAC9-210ENST00000428307 TUBBP07437 444 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 MYBL2P10244 700 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 SCP2P22307 547 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 GCLCP48506 637 aaPredicted RBP11.19□□□□□ -0.62
HDAC9-210ENST00000428307 SLC26A2P50443 739 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 GCNT1Q02742 428 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 ITIH3Q06033 890 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 LAMC2Q13753 1193 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 TMEM132AQ24JP5 1023 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 ZPBP2Q6X784 338 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 SLFN11Q7Z7L1 901 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 ANKRD23Q86SG2 305 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 SYCE1Q8N0S2 351 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 KCNN1Q92952 543 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 ACO2Q99798 780 aaKnown RBP11.19□□□□□ -0.62
HDAC9-210ENST00000428307 CCDC113Q9H0I3 377 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 RNF14Q9UBS8 474 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 CNTNAP2Q9UHC6 1331 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 ARID2Q68CP9 1835 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 TARSL2A2RTX5 802 aaKnown RBP11.19□□□□□ -0.62
HDAC9-210ENST00000428307 UNCXA6NJT0 531 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 GAS2O43903 313 aaKnown RBP11.19□□□□□ -0.62
HDAC9-210ENST00000428307 RTN2O75298 545 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 GH1P01241 217 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 LGALS2P05162 132 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 GPC5P78333 572 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 CDR2Q01850 454 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 KCTD19Q17RG1 926 aaPredicted RBP11.19□□□□□ -0.62
HDAC9-210ENST00000428307 MAMDC4Q6UXC1 1216 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 EXOC8Q8IYI6 725 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 THNSL1Q8IYQ7 743 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 MINDY3Q9H8M7 445 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 APOBEC3GQ9HC16 384 aaKnown RBP11.19□□□□□ -0.62
HDAC9-210ENST00000428307 AMFRQ9UKV5 643 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 SLC45A1Q9Y2W3 748 aa11.19□□□□□ -0.62
HDAC9-210ENST00000428307 MCM3APO60318 1980 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 TMEM110-MUSTN1A8MSY1 372 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 ATP8B1O43520 1251 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 CST3P01034 146 aaPredicted RBP11.18□□□□□ -0.62
HDAC9-210ENST00000428307 IQCF3P0C7M6 154 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 FKBP1BP68106 108 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 CDCA2Q69YH5 1023 aaPredicted RBP11.18□□□□□ -0.62
HDAC9-210ENST00000428307 C8orf74Q6P047 294 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 DDX1Q92499 740 aaKnown RBP11.18□□□□□ -0.62
HDAC9-210ENST00000428307 KRT12Q99456 494 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 AP1M1Q9BXS5 423 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 VTA1Q9NP79 307 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 MORF4L1Q9UBU8 362 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 STXBP5LQ9Y2K9 1186 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 PPME1Q9Y570 386 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 NCANO14594 1321 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 ATP8B3O60423 1300 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 LOC102724159A0A0B4J2E5 919 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 FAM189A1O60320 539 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 ZC3H11AO75152 810 aaKnown RBP eCLIP11.18□□□□□ -0.62
HDAC9-210ENST00000428307 GZMAP12544 262 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 SSTR3P32745 418 aaPredicted RBP11.18□□□□□ -0.62
HDAC9-210ENST00000428307 ENPEPQ07075 957 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 NCOA4Q13772 614 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 PWP2Q15269 919 aaKnown RBP11.18□□□□□ -0.62
HDAC9-210ENST00000428307 CST9Q5W186 159 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 CCNI2Q6ZMN8 369 aaPredicted RBP11.18□□□□□ -0.62
HDAC9-210ENST00000428307 ENOSF1Q7L5Y1 443 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 HDXQ7Z353 690 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 KLHL7Q8IXQ5 586 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 CEP120Q8N960 986 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 USP38Q8NB14 1042 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 CGRRF1Q99675 332 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 JPH2Q9BR39 696 aaPredicted RBP11.18□□□□□ -0.62
HDAC9-210ENST00000428307 PRDM10Q9NQV6 1147 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 CPA4Q9UI42 421 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 ZHX1Q9UKY1 873 aaPredicted RBP11.18□□□□□ -0.62
HDAC9-210ENST00000428307 ALG6Q9Y672 507 aa11.18□□□□□ -0.62
HDAC9-210ENST00000428307 UMODL1Q5DID0 1318 aa11.17□□□□□ -0.62
HDAC9-210ENST00000428307 MAP2K7O14733 419 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms