RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 FAM193AP78312 1265 aa15.05■□□□□ -0
APOBEC3D-202ENST00000427494 SNAPC2Q13487 334 aa15.05■□□□□ -0
APOBEC3D-202ENST00000427494 IER5Q5VY09 327 aa15.05■□□□□ -0
APOBEC3D-202ENST00000427494 C11orf63Q6NUN7 778 aa15.05■□□□□ -0
APOBEC3D-202ENST00000427494 EMBQ6PCB8 327 aa15.05■□□□□ -0
APOBEC3D-202ENST00000427494 DHX37Q8IY37 1157 aaKnown RBP15.05■□□□□ -0
APOBEC3D-202ENST00000427494 FAM71BQ8TC56 605 aa15.05■□□□□ -0
APOBEC3D-202ENST00000427494 ATP8B4Q8TF62 1192 aa15.05■□□□□ -0
APOBEC3D-202ENST00000427494 IFT81Q8WYA0 676 aa15.05■□□□□ -0
APOBEC3D-202ENST00000427494 MED4Q9NPJ6 270 aa15.05■□□□□ -0
APOBEC3D-202ENST00000427494 VPS18Q9P253 973 aa15.05■□□□□ -0
APOBEC3D-202ENST00000427494 DIS3Q9Y2L1 958 aaKnown RBP15.05■□□□□ -0
APOBEC3D-202ENST00000427494 ESYT3A0FGR9 886 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 TMEM110-MUSTN1A8MSY1 372 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 CCDC188H7C350 402 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 GYS2P54840 703 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 PAK2Q13177 524 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 UBE2Q2Q8WVN8 375 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 TCP11Q8WWU5 503 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 DDX1Q92499 740 aaKnown RBP15.04■□□□□ -0
APOBEC3D-202ENST00000427494 COPS5Q92905 334 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 CGRRF1Q99675 332 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 CHORDC1Q9UHD1 332 aaPredicted RBP15.04■□□□□ -0
APOBEC3D-202ENST00000427494 ALG6Q9Y672 507 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 ADGRA2Q96PE1 1338 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 VNN1O95497 513 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 CALCAP01258 141 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 CARSP49589 748 aaKnown RBP15.04■□□□□ -0
APOBEC3D-202ENST00000427494 EFNA5P52803 228 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 LAMTOR4Q0VGL1 99 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 PLCB4Q15147 1175 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 SEZ6Q53EL9 994 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 DCAF12L1Q5VU92 463 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 PLPPR4Q7Z2D5 763 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 LRRC71Q8N4P6 559 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 CASKIN2Q8WXE0 1202 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 ZNF653Q96CK0 615 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 NFU1Q9UMS0 254 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 FAN1Q9Y2M0 1017 aa15.04■□□□□ -0
APOBEC3D-202ENST00000427494 ZC3H4Q9UPT8 1303 aaKnown RBP15.03■□□□□ -0
APOBEC3D-202ENST00000427494 ZBTB42B2RXF5 422 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 GAS2O43903 313 aaKnown RBP15.03■□□□□ -0
APOBEC3D-202ENST00000427494 CLSTN1O94985 981 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 CYP1A2P05177 515 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 SRGAP2CP0DJJ0 459 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 TXNP10599 105 aaKnown RBP15.03■□□□□ -0
APOBEC3D-202ENST00000427494 CYP2C8P10632 490 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 ITGA4P13612 1032 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 MESDQ14696 234 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 LDLRAD1Q5T700 205 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 SPOPLQ6IQ16 392 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 CCDC62Q6P9F0 684 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 ZPBP2Q6X784 338 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 ZBTB33Q86T24 672 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 ZBTB8OSQ8IWT0 167 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 EXOC8Q8IYI6 725 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 MORC4Q8TE76 937 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 CAVIN3Q969G5 261 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 SLC10A4Q96EP9 437 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 NUP85Q9BW27 656 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 MRPL4Q9BYD3 311 aaKnown RBP15.03■□□□□ -0
APOBEC3D-202ENST00000427494 CCDC113Q9H0I3 377 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 CARD9Q9H257 536 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 EFCC1Q9HA90 598 aa15.03■□□□□ -0
APOBEC3D-202ENST00000427494 TTC7AQ9ULT0 858 aaPredicted RBP15.03■□□□□ -0
APOBEC3D-202ENST00000427494 TTLL13PA6NNM8 815 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 CLDN3O15551 220 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 PHACTR2O75167 634 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 MTA2O94776 668 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 SYF2O95926 243 aaKnown RBP15.02■□□□□ -0
APOBEC3D-202ENST00000427494 FGGP02679 453 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 NNTQ13423 1086 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 MKRN4PQ13434 485 aaPredicted RBP15.02■□□□□ -0
APOBEC3D-202ENST00000427494 MXD4Q14582 209 aaPredicted RBP15.02■□□□□ -0
APOBEC3D-202ENST00000427494 CLEC16AQ2KHT3 1053 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 TMEM63BQ5T3F8 832 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 CDCA2Q69YH5 1023 aaPredicted RBP15.02■□□□□ -0
APOBEC3D-202ENST00000427494 ACAD10Q6JQN1 1059 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 RNF149Q8NC42 400 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 SHCBP1Q8NEM2 672 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 ZNF564Q8TBZ8 553 aaPredicted RBP15.02■□□□□ -0
APOBEC3D-202ENST00000427494 RNPC3Q96LT9 517 aaKnown RBP15.02■□□□□ -0
APOBEC3D-202ENST00000427494 DDX47Q9H0S4 455 aaKnown RBP15.02■□□□□ -0
APOBEC3D-202ENST00000427494 TAF1DQ9H5J8 278 aaPredicted RBP15.02■□□□□ -0
APOBEC3D-202ENST00000427494 PDGFCQ9NRA1 345 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 GTF3C4Q9UKN8 822 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 PNMA3Q9UL41 463 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 TRPC6Q9Y210 931 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 CNTNAP2Q9UHC6 1331 aa15.02■□□□□ -0
APOBEC3D-202ENST00000427494 SCN4AP35499 1836 aa15.02□□□□□ -0.01
APOBEC3D-202ENST00000427494 PLXNA1Q9UIW2 1896 aa15.02□□□□□ -0.01
APOBEC3D-202ENST00000427494 IGKV6-21A0A0C4DH24 114 aa15.02□□□□□ -0.01
APOBEC3D-202ENST00000427494 GOLGA6BA6NDN3 693 aa15.02□□□□□ -0.01
APOBEC3D-202ENST00000427494 ASB14A6NK59 587 aa15.02□□□□□ -0.01
APOBEC3D-202ENST00000427494 MIF4GDA9UHW6 222 aaKnown RBP15.02□□□□□ -0.01
APOBEC3D-202ENST00000427494 MSCO60682 206 aa15.02□□□□□ -0.01
APOBEC3D-202ENST00000427494 PRKCBP05771 671 aa15.02□□□□□ -0.01
APOBEC3D-202ENST00000427494 COMTP21964 271 aa15.02□□□□□ -0.01
APOBEC3D-202ENST00000427494 GGCXP38435 758 aa15.02□□□□□ -0.01
APOBEC3D-202ENST00000427494 ZNF211Q13398 564 aaPredicted RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms