RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 RSPH10B2B2RC85 870 aa20.87■□□□□ 0.93
HCG18-235ENST00000426882 RSPH10BP0C881 870 aa20.87■□□□□ 0.93
HCG18-235ENST00000426882 ARFIP2P53365 341 aa20.87■□□□□ 0.93
HCG18-235ENST00000426882 COG7P83436 770 aa20.87■□□□□ 0.93
HCG18-235ENST00000426882 MKRN4PQ13434 485 aaPredicted RBP20.87■□□□□ 0.93
HCG18-235ENST00000426882 CENPPQ6IPU0 288 aa20.87■□□□□ 0.93
HCG18-235ENST00000426882 MICALL2Q8IY33 904 aa20.87■□□□□ 0.93
HCG18-235ENST00000426882 EFHD1Q9BUP0 239 aa20.87■□□□□ 0.93
HCG18-235ENST00000426882 TMEM39BQ9GZU3 492 aa20.87■□□□□ 0.93
HCG18-235ENST00000426882 ISCUQ9H1K1 167 aa20.87■□□□□ 0.93
HCG18-235ENST00000426882 POLLQ9UGP5 575 aa20.87■□□□□ 0.93
HCG18-235ENST00000426882 LRFN2Q9ULH4 789 aa20.87■□□□□ 0.93
HCG18-235ENST00000426882 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.87■□□□□ 0.93
HCG18-235ENST00000426882 ITIH2P19823 946 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 ADORA2BP29275 332 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 CASP2P42575 452 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 ACTN3Q08043 901 aaPredicted RBP20.86■□□□□ 0.93
HCG18-235ENST00000426882 TRMT10CQ7L0Y3 403 aaKnown RBP20.86■□□□□ 0.93
HCG18-235ENST00000426882 RBM15Q96T37 977 aaKnown RBP eCLIP20.86■□□□□ 0.934e-7■■□□□ 12.9
HCG18-235ENST00000426882 PCDHB2Q9Y5E7 798 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 SALL1Q9NSC2 1324 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 KITP10721 976 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 RCOR2Q8IZ40 523 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 TMEM8AQ9HCN3 771 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 PLA2G4AP47712 749 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 EIF3EP60228 445 aaKnown RBP20.86■□□□□ 0.93
HCG18-235ENST00000426882 KIAA1841Q6NSI8 718 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 ANKMY2Q8IV38 441 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 SPDL1Q96EA4 605 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 SERPINI1Q99574 410 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 SENP7Q9BQF6 1050 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 BEGAINQ9BUH8 593 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 TCP11X1B4DZS4 312 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 P4HA2O15460 535 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 PMLP29590 882 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 PRKCEQ02156 737 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 KLC3Q6P597 504 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 CDKL3Q8IVW4 592 aaPredicted RBP20.86■□□□□ 0.93
HCG18-235ENST00000426882 DHX38Q92620 1227 aaKnown RBP20.86■□□□□ 0.93
HCG18-235ENST00000426882 ERP44Q9BS26 406 aa20.86■□□□□ 0.93
HCG18-235ENST00000426882 CDH16O75309 829 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 CHN1P15882 459 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 KCNJ1P48048 391 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 IRAK1P51617 712 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 EN1Q05925 392 aaPredicted RBP20.85■□□□□ 0.93
HCG18-235ENST00000426882 EMC2Q15006 297 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 P3H1Q32P28 736 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 ANKRD20A4Q4UJ75 823 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 ANKRD20A8PQ5CZ79 823 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 ANKRD20A2Q5SQ80 823 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 ANKRD20A1Q5TYW2 823 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 PDZD8Q8NEN9 1154 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 PRMT1Q99873 361 aaKnown RBP20.85■□□□□ 0.93
HCG18-235ENST00000426882 SLC13A1Q9BZW2 595 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 CCDC195A0A1B0GUA6 201 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 HLA-DRAP01903 254 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 TXNP10599 105 aaKnown RBP20.85■□□□□ 0.93
HCG18-235ENST00000426882 MDM2Q00987 491 aaPredicted RBP20.85■□□□□ 0.93
HCG18-235ENST00000426882 LONRF1Q17RB8 773 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 ZNF280CQ8ND82 737 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 FBXO28Q9NVF7 368 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 CHORDC1Q9UHD1 332 aaPredicted RBP20.85■□□□□ 0.93
HCG18-235ENST00000426882 MX2P20592 715 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 TRABDQ9H4I3 376 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 SCAF8Q9UPN6 1271 aaKnown RBP20.85■□□□□ 0.93
HCG18-235ENST00000426882 INPP5FQ9Y2H2 1132 aa20.85■□□□□ 0.93
HCG18-235ENST00000426882 FOXP2O15409 715 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 LSP1P33241 339 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 SLC12A1Q13621 1099 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 HSP90AA5PQ58FG0 334 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 TPCN2Q8NHX9 752 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 GRAMD1AQ96CP6 724 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 MOV10L1Q9BXT6 1211 aaKnown RBP20.84■□□□□ 0.93
HCG18-235ENST00000426882 ADAM33Q9BZ11 813 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 ECT2Q9H8V3 914 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 SENP1Q9P0U3 644 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 POLRMTO00411 1230 aaKnown RBP20.84■□□□□ 0.93
HCG18-235ENST00000426882 TRIM65Q6PJ69 517 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 TRIM67Q6ZTA4 783 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 TRIM4Q9C037 500 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 CNOT7Q9UIV1 285 aaKnown RBP20.84■□□□□ 0.93
HCG18-235ENST00000426882 GNAT1P11488 350 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 PON1P27169 355 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 GRAMD1BQ3KR37 738 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 EPC2Q52LR7 807 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 SEPT1Q8WYJ6 367 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 GCOM2Q9BZD3 368 aaPredicted RBP20.84■□□□□ 0.93
HCG18-235ENST00000426882 DBR1Q9UK59 544 aaKnown RBP20.84■□□□□ 0.93
HCG18-235ENST00000426882 PHF20L1A8MW92 1017 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 RFC1P35251 1148 aaPredicted RBP20.84■□□□□ 0.93
HCG18-235ENST00000426882 SARSP49591 514 aaKnown RBP20.84■□□□□ 0.93
HCG18-235ENST00000426882 WDR93Q6P2C0 686 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 NUDCD3Q8IVD9 361 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 PSD3Q9NYI0 1048 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 BFARQ9NZS9 450 aa20.84■□□□□ 0.93
HCG18-235ENST00000426882 HERVK_113P62684 666 aa20.83■□□□□ 0.93
HCG18-235ENST00000426882 DDX27Q96GQ7 796 aaKnown RBP20.83■□□□□ 0.93
HCG18-235ENST00000426882 OSBPL8Q9BZF1 889 aa20.83■□□□□ 0.93
HCG18-235ENST00000426882 NOP14P78316 857 aaKnown RBP20.83■□□□□ 0.93
HCG18-235ENST00000426882 TSTA3Q13630 321 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms