RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 MCRS1Q96EZ8 462 aa16.24■□□□□ 0.19
PDAP1-202ENST00000426447 RTKNQ9BST9 563 aa16.24■□□□□ 0.19
PDAP1-202ENST00000426447 EPC1Q9H2F5 836 aa16.24■□□□□ 0.19
PDAP1-202ENST00000426447 HCFC1R1Q9NWW0 138 aa16.24■□□□□ 0.19
PDAP1-202ENST00000426447 DNMT3BQ9UBC3 853 aaKnown RBP16.24■□□□□ 0.19
PDAP1-202ENST00000426447 RAB23Q9ULC3 237 aa16.24■□□□□ 0.19
PDAP1-202ENST00000426447 KCNH3Q9ULD8 1083 aa16.24■□□□□ 0.19
PDAP1-202ENST00000426447 MRPS23Q9Y3D9 190 aaKnown RBP16.24■□□□□ 0.19
PDAP1-202ENST00000426447 DMXL1Q9Y485 3027 aa16.24■□□□□ 0.19
PDAP1-202ENST00000426447 WDR87Q6ZQQ6 2873 aa16.23■□□□□ 0.19
PDAP1-202ENST00000426447 ADAM12O43184 909 aa16.23■□□□□ 0.19
PDAP1-202ENST00000426447 KIF4AO95239 1232 aa16.23■□□□□ 0.19
PDAP1-202ENST00000426447 XBP1P17861 261 aa16.23■□□□□ 0.19
PDAP1-202ENST00000426447 GLRA2P23416 452 aa16.23■□□□□ 0.19
PDAP1-202ENST00000426447 RUFY3Q7L099 469 aa16.23■□□□□ 0.19
PDAP1-202ENST00000426447 POTEDQ86YR6 584 aa16.23■□□□□ 0.19
PDAP1-202ENST00000426447 NPAS3Q8IXF0 933 aa16.23■□□□□ 0.19
PDAP1-202ENST00000426447 CLDN23Q96B33 292 aa16.23■□□□□ 0.19
PDAP1-202ENST00000426447 EIF2AK1Q9BQI3 630 aaKnown RBP16.23■□□□□ 0.19
PDAP1-202ENST00000426447 LARP6Q9BRS8 491 aaKnown RBP16.23■□□□□ 0.19
PDAP1-202ENST00000426447 NFKBIZQ9BYH8 718 aa16.23■□□□□ 0.19
PDAP1-202ENST00000426447 HEBP1Q9NRV9 189 aa16.23■□□□□ 0.19
PDAP1-202ENST00000426447 ANKEF1Q9NU02 776 aa16.23■□□□□ 0.19
PDAP1-202ENST00000426447 DOCK8Q8NF50 2099 aa16.23■□□□□ 0.19
PDAP1-202ENST00000426447 LRRIQ4A6NIV6 560 aa16.22■□□□□ 0.19
PDAP1-202ENST00000426447 LILRB5O75023 590 aa16.22■□□□□ 0.19
PDAP1-202ENST00000426447 ECI2O75521 394 aa16.22■□□□□ 0.19
PDAP1-202ENST00000426447 RPS9P46781 194 aaKnown RBP16.22■□□□□ 0.19
PDAP1-202ENST00000426447 ADCY1Q08828 1119 aa16.22■□□□□ 0.19
PDAP1-202ENST00000426447 RAB33AQ14088 237 aa16.22■□□□□ 0.19
PDAP1-202ENST00000426447 TOB2Q14106 344 aaPredicted RBP16.22■□□□□ 0.19
PDAP1-202ENST00000426447 MAEAQ7L5Y9 396 aa16.22■□□□□ 0.19
PDAP1-202ENST00000426447 ZNF274Q96GC6 653 aaPredicted RBP16.22■□□□□ 0.19
PDAP1-202ENST00000426447 FAM126AQ9BYI3 521 aaPredicted RBP16.22■□□□□ 0.19
PDAP1-202ENST00000426447 POLR3FQ9H1D9 316 aaPredicted RBP16.22■□□□□ 0.19
PDAP1-202ENST00000426447 SNTG2Q9NY99 539 aa16.22■□□□□ 0.19
PDAP1-202ENST00000426447 PCDHA12Q9UN75 941 aa16.22■□□□□ 0.19
PDAP1-202ENST00000426447 ZMYM2Q9UBW7 1377 aa16.22■□□□□ 0.19
PDAP1-202ENST00000426447 CACNA1IQ9P0X4 2223 aa16.22■□□□□ 0.19
PDAP1-202ENST00000426447 MTCL1Q9Y4B5 1905 aaKnown RBP16.21■□□□□ 0.19
PDAP1-202ENST00000426447 OTOGLQ3ZCN5 2332 aa16.21■□□□□ 0.19
PDAP1-202ENST00000426447 NRLP54845 237 aa16.21■□□□□ 0.19
PDAP1-202ENST00000426447 MTAPQ13126 283 aa16.21■□□□□ 0.19
PDAP1-202ENST00000426447 PPP2R5DQ14738 602 aa16.21■□□□□ 0.19
PDAP1-202ENST00000426447 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.21■□□□□ 0.19
PDAP1-202ENST00000426447 ZBTB8OSQ8IWT0 167 aa16.21■□□□□ 0.19
PDAP1-202ENST00000426447 NELL1Q92832 810 aa16.21■□□□□ 0.19
PDAP1-202ENST00000426447 PLA2G2FQ9BZM2 168 aa16.21■□□□□ 0.19
PDAP1-202ENST00000426447 PRMT7Q9NVM4 692 aaPredicted RBP16.21■□□□□ 0.19
PDAP1-202ENST00000426447 GDE1Q9NZC3 331 aa16.21■□□□□ 0.19
PDAP1-202ENST00000426447 NDRG2Q9UN36 371 aaKnown RBP16.21■□□□□ 0.19
PDAP1-202ENST00000426447 CYP46A1Q9Y6A2 500 aa16.21■□□□□ 0.19
PDAP1-202ENST00000426447 CDY1Q9Y6F8 540 aa16.21■□□□□ 0.19
PDAP1-202ENST00000426447 TDRD15B5MCY1 1934 aaKnown RBP16.2■□□□□ 0.18
PDAP1-202ENST00000426447 N4BP3O15049 544 aa16.2■□□□□ 0.18
PDAP1-202ENST00000426447 LYPLA2O95372 231 aa16.2■□□□□ 0.18
PDAP1-202ENST00000426447 POU2F2P09086 479 aa16.2■□□□□ 0.18
PDAP1-202ENST00000426447 PTPN2P17706 415 aa16.2■□□□□ 0.18
PDAP1-202ENST00000426447 SPIRE1Q08AE8 756 aa16.2■□□□□ 0.18
PDAP1-202ENST00000426447 LPAL2Q16609 132 aa16.2■□□□□ 0.18
PDAP1-202ENST00000426447 RTL10Q7L3V2 364 aa16.2■□□□□ 0.18
PDAP1-202ENST00000426447 PIGOQ8TEQ8 1089 aa16.2■□□□□ 0.18
PDAP1-202ENST00000426447 CHAMP1Q96JM3 812 aa16.2■□□□□ 0.18
PDAP1-202ENST00000426447 PRIMPOLQ96LW4 560 aa16.2■□□□□ 0.18
PDAP1-202ENST00000426447 HSD17B14Q9BPX1 270 aa16.2■□□□□ 0.18
PDAP1-202ENST00000426447 ADPGKQ9BRR6 497 aa16.2■□□□□ 0.18
PDAP1-202ENST00000426447 COL4A3Q01955 1670 aa16.2■□□□□ 0.18
PDAP1-202ENST00000426447 FANCMQ8IYD8 2048 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 A0A087WWV3 80 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 MAN2B1O00754 1011 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 PTGESO14684 152 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 USO1O60763 962 aaKnown RBP16.19■□□□□ 0.18
PDAP1-202ENST00000426447 CDKL5O76039 1030 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 B3GAT3O94766 335 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 LRG1P02750 347 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 RHOP08100 348 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 LIG1P18858 919 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 ELF1P32519 619 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 RARRES1P49788 294 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 SPEM2Q0P670 501 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 ST3GAL2Q16842 350 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 TANGO2Q6ICL3 276 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 NOSTRINQ8IVI9 506 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 OXER1Q8TDS5 423 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 ELSPBP1Q96BH3 223 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 BRD9Q9H8M2 597 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 ZSWIM6Q9HCJ5 1215 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 PRMT8Q9NR22 394 aaPredicted RBP16.19■□□□□ 0.18
PDAP1-202ENST00000426447 NCOR2Q9Y618 2525 aa16.19■□□□□ 0.18
PDAP1-202ENST00000426447 MIA3Q5JRA6 1907 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 MYH15Q9Y2K3 1946 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 TRAPPC3O43617 180 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 RECQL4O94761 1208 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 REC8O95072 547 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 FGFR3P22607 806 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 TGM1P22735 817 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 FZD5Q13467 585 aa16.18■□□□□ 0.18
PDAP1-202ENST00000426447 PRPF4BQ13523 1007 aaKnown RBP16.18■□□□□ 0.18
PDAP1-202ENST00000426447 GRM2Q14416 872 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms