RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 XXYLT1Q8NBI6 393 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 NAP1L4Q99733 375 aaKnown RBP14.31□□□□□ -0.12
USP42-203ENST00000426246 SIX2Q9NPC8 291 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 PITPNM2Q9BZ72 1349 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 IGLV3-22A0A075B6J6 115 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 HSPA9P38646 679 aaKnown RBP14.31□□□□□ -0.12
USP42-203ENST00000426246 PEX19P40855 299 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 CLNS1AP54105 237 aaKnown RBP14.31□□□□□ -0.12
USP42-203ENST00000426246 GHRHRQ02643 423 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 ATP13A4Q4VNC1 1196 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 C4orf33Q8N1A6 199 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 LRRC57Q8N9N7 239 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 CCDC63Q8NA47 563 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 SLC17A8Q8NDX2 589 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 PRCCQ92733 491 aaPredicted RBP14.31□□□□□ -0.12
USP42-203ENST00000426246 CHMP6Q96FZ7 201 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 XPO6Q96QU8 1125 aaKnown RBP14.31□□□□□ -0.12
USP42-203ENST00000426246 NAP1L3Q99457 506 aaPredicted RBP14.31□□□□□ -0.12
USP42-203ENST00000426246 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.31□□□□□ -0.12
USP42-203ENST00000426246 PPP2R3BQ9Y5P8 575 aa14.31□□□□□ -0.12
USP42-203ENST00000426246 O00370 1275 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 ECEL1O95672 775 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 GH1P01241 217 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 MYO1EQ12965 1108 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 MTMR1Q13613 665 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 NOP9Q86U38 636 aaKnown RBP14.3□□□□□ -0.12
USP42-203ENST00000426246 SCFD2Q8WU76 684 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 SLC5A5Q92911 643 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 CHST7Q9NS84 486 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 TRAF3IP3Q9Y228 551 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 ZHX2Q9Y6X8 837 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 CEP350Q5VT06 3117 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 LCA5LO95447 670 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 ICAM1P05362 532 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 CD19P15391 556 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 HYIQ5T013 277 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 ARHGEF16Q5VV41 709 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 LRRN4Q8WUT4 740 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 CLEC4DQ8WXI8 215 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 PCDHB18PQ96TA0 734 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 KMT5AQ9NQR1 393 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 MARK3P27448 753 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 SNCBQ16143 134 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 TTC27Q6P3X3 843 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 TMEM270Q6UE05 265 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 ANKMY2Q8IV38 441 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 CCDC33Q8N5R6 958 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 TAAR1Q96RJ0 339 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 WRNIP1Q96S55 665 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 FAM167BQ9BTA0 163 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 OSBPL7Q9BZF2 842 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 SLC38A10Q9HBR0 1119 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 ODF2LQ9ULJ1 636 aa14.3□□□□□ -0.12
USP42-203ENST00000426246 KRT19P08727 400 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 RARAP10276 462 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 DCAF15Q66K64 600 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 TMEM143Q96AN5 459 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 WNK4Q96J92 1243 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 ABCF3Q9NUQ8 709 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 SAE1Q9UBE0 346 aaPredicted RBP14.29□□□□□ -0.12
USP42-203ENST00000426246 ATP9AO75110 1047 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 ZSCAN5DPP0CG00 497 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 GAP43P17677 238 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 HSD17B4P51659 736 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 NOL9Q5SY16 702 aaKnown RBP14.29□□□□□ -0.12
USP42-203ENST00000426246 C1orf186Q6ZWK4 172 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 CCDC91Q7Z6B0 441 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 VSIG1Q86XK7 387 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 PRPF38AQ8NAV1 312 aaKnown RBP14.29□□□□□ -0.12
USP42-203ENST00000426246 SYN2Q92777 582 aaPredicted RBP14.29□□□□□ -0.12
USP42-203ENST00000426246 RMDN3Q96TC7 470 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 SUCLA2Q9P2R7 463 aaPredicted RBP14.29□□□□□ -0.12
USP42-203ENST00000426246 MRPL11Q9Y3B7 192 aaKnown RBP14.29□□□□□ -0.12
USP42-203ENST00000426246 SHOX2O60902 331 aaPredicted RBP14.29□□□□□ -0.12
USP42-203ENST00000426246 RPS6KA5O75582 802 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 BRAFP15056 766 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 EZRP15311 586 aaKnown RBP14.29□□□□□ -0.12
USP42-203ENST00000426246 SMTNP53814 917 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 BACE1P56817 501 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 MAPK7Q13164 816 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 SWSAP1Q6NVH7 229 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 PRELID2Q8N945 189 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.29□□□□□ -0.12
USP42-203ENST00000426246 ACTRT1Q8TDG2 376 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 NT5C1BQ96P26 610 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 RNF181Q9P0P0 153 aa14.29□□□□□ -0.12
USP42-203ENST00000426246 TMEM120BA0PK00 339 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 BANF1O75531 89 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 YWHABP31946 246 aaKnown RBP14.28□□□□□ -0.12
USP42-203ENST00000426246 SNRNP35Q16560 246 aaKnown RBP14.28□□□□□ -0.12
USP42-203ENST00000426246 SMTNL2Q2TAL5 461 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 DCUN1D2Q6PH85 259 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 ATP8B4Q8TF62 1192 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 SLC24A3Q9HC58 644 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 GABBR1Q9UBS5 961 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 ANAPC5Q9UJX4 755 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 VAV3Q9UKW4 847 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 INTUQ9ULD6 942 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 TELO2Q9Y4R8 837 aa14.28□□□□□ -0.12
USP42-203ENST00000426246 PCDHB4Q9Y5E5 795 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms